Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:43 (3376904): wrapper (7.7.26015): starting
05:43:43 (3376904): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:43:43] Arguments: --nthreads 8
[2025-10-13 05:43:43] Threads: 8
[2025-10-13 05:43:43] Checking for CVMFS
[2025-10-13 05:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:43:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:43:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:43:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:43:44] 2.13.2.0 5242 6929 137204 151656 3 67 40551633 40960001 20243 16776704 0 24769571 99.747 14830563 32566 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:43:44] CVMFS is ok
[2025-10-13 05:43:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:43:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:43:44] Further information can be found at the LHC@home message board.
[2025-10-13 05:43:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:43:44] Checking for apptainer binary...
[2025-10-13 05:43:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:43:44] Running /usr/bin/apptainer --version
[2025-10-13 05:43:45] apptainer version 1.4.3-1.el9
[2025-10-13 05:43:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:43:45] c-212-1.aglt2.org
[2025-10-13 05:43:45] apptainer works
[2025-10-13 05:43:45] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:43:45] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:43:45] Starting ATLAS job with PandaID=6840429365
[2025-10-13 05:43:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:20:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:20:25]  status=None
[2025-10-13 07:20:25]  status_code=0
[2025-10-13 07:20:25]  storage_token=
[2025-10-13 07:20:25]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6840429365/log.46676269._084711.job.log.tgz.1
[2025-10-13 07:20:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/30/log.46676269._084711.job.log.tgz.1
[2025-10-13 07:20:25]  workdir=None
[2025-10-13 07:20:25] ]
[2025-10-13 07:20:25] 2025-10-13 11:19:21,488 | INFO     | transferring file log.46676269._084711.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6840429365/log.46676269._084711.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:20:25] 2025-10-13 11:19:21,488 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6840429365/log.46676269._084711.job.log.tgz.1 /tmp/boinchome/slots/6/log.46676269._084711.job
[2025-10-13 07:20:25] 2025-10-13 11:19:21,517 | INFO     | adding to output.list: log.46676269._084711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/30/log.46676269._084711.job.log.tg
[2025-10-13 07:20:25] 2025-10-13 11:19:21,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:20:25] 2025-10-13 11:19:21,518 | INFO     | summary of transferred files:
[2025-10-13 07:20:25] 2025-10-13 11:19:21,518 | INFO     |  -- lfn=log.46676269._084711.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:20:25] 2025-10-13 11:19:21,518 | INFO     | stage-out finished correctly
[2025-10-13 07:20:25] 2025-10-13 11:19:21,838 | INFO     | PID=3380600 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 07:20:25] 2025-10-13 11:19:21,838 | INFO     | .. there are 20 such processes running
[2025-10-13 07:20:25] 2025-10-13 11:19:21,967 | INFO     | monitor loop #408: job 0:6840429365 is in state 'finished'
[2025-10-13 07:20:25] 2025-10-13 11:19:21,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:25] 2025-10-13 11:19:22,839 | INFO     | time since job start (5714s) is within the limit (172800.0s)
[2025-10-13 07:20:25] 2025-10-13 11:19:22,859 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | job 6840429365 has state=finished
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | preparing for final server update for job 6840429365 in state='finished'
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:20:25] 2025-10-13 11:19:22,923 | INFO     | job 6840429365 has finished - writing final server update
[2025-10-13 07:20:25] 2025-10-13 11:19:22,924 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:20:25] 2025-10-13 11:19:22,924 | INFO     | executing command: lscpu
[2025-10-13 07:20:25] 2025-10-13 11:19:22,969 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:20:25] 2025-10-13 11:19:24,470 | INFO     | monitor loop #409: job 0:6840429365 is in state 'finished'
[2025-10-13 07:20:25] 2025-10-13 11:19:24,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:25] 2025-10-13 11:19:24,845 | INFO     | time since job start (5716s) is within the limit (172800.0s)
[2025-10-13 07:20:25] 2025-10-13 11:19:26,851 | INFO     | time since job start (5718s) is within the limit (172800.0s)
[2025-10-13 07:20:25] 2025-10-13 11:19:26,974 | INFO     | monitor loop #410: job 0:6840429365 is in state 'finished'
[2025-10-13 07:20:25] 2025-10-13 11:19:26,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,614 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:20:25] 2025-10-13 11:19:27,620 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2994.5154166666657
[2025-10-13 07:20:25] 2025-10-13 11:19:27,635 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6840429365/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,636 | INFO     | extracted standard info from prmon json
[2025-10-13 07:20:25] 2025-10-13 11:19:27,636 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:20:25] 2025-10-13 11:19:27,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:20:25] 2025-10-13 11:19:27,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:20:25] 2025-10-13 11:19:27,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:20:25] 2025-10-13 11:19:27,638 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | sum of square deviations: 197193759.20930234
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | sum of deviations: -7869373970.790697
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | mean x: 1760351604.5581396
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | mean y: 2566062.5581395347
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | -- intersect: 70252583871.92485
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | intersect: 70252583871.92485
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | chi2: 0.07040789671280737
[2025-10-13 07:20:25] 2025-10-13 11:19:27,639 | INFO     | -- intersect: 70252583871.92485
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | current memory leak: -39.91 B/s (using 86 data points, chi2=0.07)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | could have reported an average CPU frequency of 2997 MHz (7 samples)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | ..............................
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . Timing measurements:
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . get job = 0 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . initial setup = 3 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . payload setup = 14 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . stage-in = 0 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . payload execution = 5659 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . stage-out = 0 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | . log creation = 0 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,640 | INFO     | ..............................
[2025-10-13 07:20:25] 2025-10-13 11:19:27,703 | INFO     | 
[2025-10-13 07:20:25] 2025-10-13 11:19:27,703 | INFO     | job summary report
[2025-10-13 07:20:25] 2025-10-13 11:19:27,703 | INFO     | --------------------------------------------------
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | PanDA job id: 6840429365
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | task id: 46676269
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | errors: (none)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | pilot state: finished 
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | transexitcode: 0
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | exeerrorcode: 0
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | exeerrordiag: 
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | exitcode: 0
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | exitmsg: OK
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | cpuconsumptiontime: 36350 s
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | nevents: 400
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | neventsw: 0
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | pid: 3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | pgrp: 3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | corecount: 8
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | event service: False
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | sizes: {0: 2348856, 11: 2348856, 14: 2349146, 22: 2349174, 5677: 2375863, 5680: 2384861, 5681: 2385045, 5686: 2385239}
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | --------------------------------------------------
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | 
[2025-10-13 07:20:25] 2025-10-13 11:19:27,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 07:20:25] 2025-10-13 11:19:27,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:20:25] 2025-10-13 11:19:27,725 | INFO     | job 6840429365 has completed (purged errors)
[2025-10-13 07:20:25] 2025-10-13 11:19:27,725 | INFO     | overall cleanup function is called
[2025-10-13 07:20:25] 2025-10-13 11:19:28,733 | INFO     | --- collectZombieJob: --- 10, [3387249]
[2025-10-13 07:20:25] 2025-10-13 11:19:28,734 | INFO     | zombie collector waiting for pid 3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:28,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:20:25] 2025-10-13 11:19:28,734 | INFO     | collected zombie processes
[2025-10-13 07:20:25] 2025-10-13 11:19:28,734 | INFO     | will attempt to kill all subprocesses of pid=3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:29,111 | INFO     | process IDs to be killed: [3387249] (in reverse order)
[2025-10-13 07:20:25] 2025-10-13 11:19:29,231 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:20:25] 2025-10-13 11:19:29,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:20:25] 2025-10-13 11:19:29,248 | INFO     | did not find any defunct processes belonging to 3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:29,263 | INFO     | did not find any defunct processes belonging to 3387249
[2025-10-13 07:20:25] 2025-10-13 11:19:29,263 | INFO     | ready for new job
[2025-10-13 07:20:25] 2025-10-13 11:19:29,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:20:25] 2025-10-13 11:19:29,265 | INFO     | ***************************************
[2025-10-13 07:20:25] 2025-10-13 11:19:29,265 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:20:25] 2025-10-13 11:19:29,265 | INFO     | ***************************************
[2025-10-13 07:20:25] 2025-10-13 11:19:29,265 | INFO     | 
[2025-10-13 07:20:25] 2025-10-13 11:19:29,271 | INFO     | architecture information:
[2025-10-13 07:20:25] 2025-10-13 11:19:29,271 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:20:25] 2025-10-13 11:19:29,287 | INFO     | cat /etc/os-release:
[2025-10-13 07:20:25] NAME="CentOS Linux"
[2025-10-13 07:20:25] VERSION="7 (Core)"
[2025-10-13 07:20:25] ID="centos"
[2025-10-13 07:20:25] ID_LIKE="rhel fedora"
[2025-10-13 07:20:25] VERSION_ID="7"
[2025-10-13 07:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:20:25] ANSI_COLOR="0;31"
[2025-10-13 07:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:20:25] HOME_URL="https://www.centos.org/"
[2025-10-13 07:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:20:25] 
[2025-10-13 07:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:20:25] 
[2025-10-13 07:20:25] 2025-10-13 11:19:29,288 | INFO     | ***************************************
[2025-10-13 07:20:25] 2025-10-13 11:19:29,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 07:20:25] 2025-10-13 11:19:29,810 | INFO     | sufficient remaining disk space (126058758144 B)
[2025-10-13 07:20:25] 2025-10-13 11:19:29,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:20:25] 2025-10-13 11:19:29,810 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:20:25] 2025-10-13 11:19:29,810 | INFO     | update_server=False
[2025-10-13 07:20:25] 2025-10-13 11:19:29,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:20:25] 2025-10-13 11:19:29,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:20:25] 2025-10-13 11:19:29,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:20:25] 2025-10-13 11:19:30,165 | INFO     | all job control threads have been joined
[2025-10-13 07:20:25] 2025-10-13 11:19:30,260 | INFO     | all data control threads have been joined
[2025-10-13 07:20:25] 2025-10-13 11:19:30,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:25] 2025-10-13 11:19:30,487 | INFO     | aborting loop
[2025-10-13 07:20:25] 2025-10-13 11:19:30,815 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,100 | INFO     | [job] validate thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,142 | INFO     | all payload control threads have been joined
[2025-10-13 07:20:25] 2025-10-13 11:19:31,171 | INFO     | [job] control thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,265 | INFO     | [data] control thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,491 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,691 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:31,817 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,084 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,147 | INFO     | [payload] control thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,152 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,228 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,285 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:32,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:25] 2025-10-13 11:19:33,718 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:33,818 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:19:40,601 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:20:25] 2025-10-13 11:19:41,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:20:25] 2025-10-13 11:20:00,438 | INFO     | PID=3380600 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:20:25] 2025-10-13 11:20:00,438 | INFO     | .. there are 20 such processes running
[2025-10-13 07:20:25] 2025-10-13 11:20:00,439 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:20:25] 2025-10-13 11:20:00,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:20:25] 2025-10-13 11:20:00,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:20:25] 2025-10-13 11:20:17,814 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:20:25] 2025-10-13 11:20:18,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943237568320)>', '<ExcThread(monitor, started 139942877439744)>']
[2025-10-13 07:20:25] 2025-10-13 11:20:19,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:20:25] 2025-10-13 11:20:19,550 | INFO     | [monitor] control thread has ended
[2025-10-13 07:20:25] 2025-10-13 11:20:23,735 | INFO     | all workflow threads have been joined
[2025-10-13 07:20:25] 2025-10-13 11:20:23,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:20:25] 2025-10-13 11:20:23,736 | INFO     | traces error code: 0
[2025-10-13 07:20:25] 2025-10-13 11:20:23,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:20:25] 2025-10-13 11:20:23,968 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:20:25] 2025-10-13 11:20:23,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:20:25] 2025-10-13 11:20:24,019 [wrapper] pilotpid: 3380600
[2025-10-13 07:20:25] 2025-10-13 11:20:24,044 [wrapper] Pilot exit status: 0
[2025-10-13 07:20:25] 2025-10-13 11:20:24,193 [wrapper] pandaids: 6840429365
[2025-10-13 07:20:25] 2025-10-13 11:20:24,636 [wrapper] cleanup supervisor_pilot 3690030 3380601
[2025-10-13 07:20:25] 2025-10-13 11:20:24,653 [wrapper] Test setup, not cleaning
[2025-10-13 07:20:25] 2025-10-13 11:20:24,680 [wrapper] apfmon messages muted
[2025-10-13 07:20:25] 2025-10-13 11:20:24,701 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:20:25] 2025-10-13 11:20:24,714 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:20:25]  *** Error codes and diagnostics ***
[2025-10-13 07:20:25]     "exeErrorCode": 0,
[2025-10-13 07:20:25]     "exeErrorDiag": "",
[2025-10-13 07:20:25]     "pilotErrorCode": 0,
[2025-10-13 07:20:25]     "pilotErrorDiag": "",
[2025-10-13 07:20:25]  *** Listing of results directory ***
[2025-10-13 07:20:25] total 422040
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:19 queuedata.json
[2025-10-13 07:20:25] -rwx------. 1 boincer umatlas     36292 Oct 12 13:19 runpilot2-wrapper.sh
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:20:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:43 run_atlas
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:43 job.xml
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas 224505799 Oct 13 05:43 EVNT.46676267._004813.pool.root.1
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 05:43 input.tar.gz
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:20:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:43 shared
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:43 boinc_lockfile
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 05:43 pandaJob.out
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas    972849 Oct 13 05:44 agis_schedconf.cvmfs.json
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:20:25] drwx------. 5 boincer umatlas      4096 Oct 13 05:44 pilot3
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 07:18 init_data.xml
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas 201447987 Oct 13 07:18 HITS.46676269._084711.pool.root.1
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:18 boinc_task_state.xml
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas      1033 Oct 13 07:19 memory_monitor_summary.json
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas    347988 Oct 13 07:19 log.46676269._084711.job.log.tgz.1
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas      7774 Oct 13 07:19 heartbeat.json
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas        95 Oct 13 07:20 pilot_heartbeat.json
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:20 boinc_mmap_file
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:20 wrapper_checkpoint.txt
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas      4897 Oct 13 07:20 pilotlog.txt
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas    814531 Oct 13 07:20 log.46676269._084711.job.log.1
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas       357 Oct 13 07:20 output.list
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:20 runtime_log
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas   1177600 Oct 13 07:20 result.tar.gz
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 07:20 runtime_log.err
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas       652 Oct 13 07:20 PCALDmTuES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSrkNDmXoeR3n.diag
[2025-10-13 07:20:25] -rw-r--r--. 1 boincer umatlas     22095 Oct 13 07:20 stderr.txt
[2025-10-13 07:20:25] HITS file was successfully produced:
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas 201447987 Oct 13 07:18 shared/HITS.pool.root.1
[2025-10-13 07:20:25]  *** Contents of shared directory: ***
[2025-10-13 07:20:25] total 417704
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas 224505799 Oct 13 05:43 ATLAS.root_0
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 05:43 input.tar.gz
[2025-10-13 07:20:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas 201447987 Oct 13 07:18 HITS.pool.root.1
[2025-10-13 07:20:25] -rw-------. 1 boincer umatlas   1177600 Oct 13 07:20 result.tar.gz
07:20:26 (3376904): run_atlas exited; CPU time 36430.102351
07:20:26 (3376904): called boinc_finish(0)

</stderr_txt>
]]>

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