Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:49:49 (45138): wrapper (7.7.26015): starting
04:49:49 (45138): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:49:49] Arguments: --nthreads 8
[2025-10-13 04:49:49] Threads: 8
[2025-10-13 04:49:49] Checking for CVMFS
[2025-10-13 04:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:49:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:49:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:49:49] 2.11.2.0 13817 481780 275400 151654 0 188 9973875 18432000 2749 130560 8 211422584 99.523 263823032 24851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-13 04:49:49] CVMFS is ok
[2025-10-13 04:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:49:49] Further information can be found at the LHC@home message board.
[2025-10-13 04:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:49:49] Checking for apptainer binary...
[2025-10-13 04:49:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:49:49] Running /usr/bin/apptainer --version
[2025-10-13 04:49:49] apptainer version 1.3.2-1.el7
[2025-10-13 04:49:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:49:50] c-9-29.aglt2.org
[2025-10-13 04:49:50] apptainer works
[2025-10-13 04:49:50] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:49:50] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:49:50] Starting ATLAS job with PandaID=6841070223
[2025-10-13 04:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:28:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:28:22] 2025-10-13 11:27:31,401 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:28:22] 2025-10-13 11:27:31,401 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | sum of deviations: 9845647294.000002
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | mean x: 1760350124.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | mean y: 2452956.3419354837
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | -- intersect: -15007795730.613771
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | intersect: -15007795730.613771
[2025-10-13 07:28:22] 2025-10-13 11:27:31,402 | INFO     | chi2: 2.2886483660006878
[2025-10-13 07:28:22] 2025-10-13 11:27:31,403 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 07:28:22] 2025-10-13 11:27:31,403 | INFO     | sum of deviations: 20089344506.500004
[2025-10-13 07:28:22] 2025-10-13 11:27:31,403 | INFO     | mean x: 1760349971.5
[2025-10-13 07:28:22] 2025-10-13 11:27:31,403 | INFO     | mean y: 2466997.7666666666
[2025-10-13 07:28:22] 2025-10-13 11:27:31,404 | INFO     | -- intersect: -33790932716.742756
[2025-10-13 07:28:22] 2025-10-13 11:27:31,404 | INFO     | intersect: -33790932716.742756
[2025-10-13 07:28:22] 2025-10-13 11:27:31,404 | INFO     | chi2: 1.4169193745008188
[2025-10-13 07:28:22] 2025-10-13 11:27:31,404 | INFO     | current chi2=1.4169193745008188 (change=38.08924972704204 %)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,404 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | sum of deviations: 19301622805.999996
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | mean x: 1760349819.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | mean y: 2465810.3862068965
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | -- intersect: -35941916944.88349
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | intersect: -35941916944.88349
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | chi2: 1.4183751065360166
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | current chi2=1.4183751065360166 (change=-0.1027392285965905 %)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,405 | INFO     | right removable region: 144
[2025-10-13 07:28:22] 2025-10-13 11:27:31,406 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 07:28:22] 2025-10-13 11:27:31,406 | INFO     | sum of deviations: -12819417363.000002
[2025-10-13 07:28:22] 2025-10-13 11:27:31,406 | INFO     | mean x: 1760350276.5
[2025-10-13 07:28:22] 2025-10-13 11:27:31,406 | INFO     | mean y: 2484459.5866666664
[2025-10-13 07:28:22] 2025-10-13 11:27:31,407 | INFO     | -- intersect: 21566740574.24018
[2025-10-13 07:28:22] 2025-10-13 11:27:31,407 | INFO     | intersect: 21566740574.24018
[2025-10-13 07:28:22] 2025-10-13 11:27:31,407 | INFO     | chi2: 0.9454575771071286
[2025-10-13 07:28:22] 2025-10-13 11:27:31,407 | INFO     | current chi2=0.9454575771071286 (change=58.689259951310305 %)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,407 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | sum of deviations: -14187466620.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | mean x: 1760350429.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | mean y: 2486440.4896551725
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | -- intersect: 26423058034.63832
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | intersect: 26423058034.63832
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | chi2: 0.9250310479774786
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | current chi2=0.9250310479774786 (change=2.16049134559271 %)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,408 | INFO     | left removable region: 20
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | sum of deviations: -26188977.4999999
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | mean x: 1760350398.5
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | mean y: 2495222.7016129033
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | -- intersect: 80478670.42827767
[2025-10-13 07:28:22] 2025-10-13 11:27:31,409 | INFO     | intersect: 80478670.42827767
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | chi2: 0.010319698652283152
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | -- intersect: 80478670.42827767
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | current memory leak: -0.04 B/s (using 124 data points, chi2=0.01)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | could have reported an average CPU frequency of 3000 MHz (9 samples)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | ..............................
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | . Timing measurements:
[2025-10-13 07:28:22] 2025-10-13 11:27:31,410 | INFO     | . get job = 0 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . initial setup = 2 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . payload setup = 5 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . stage-in = 0 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . payload execution = 9421 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . stage-out = 0 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | . log creation = 0 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,411 | INFO     | ..............................
[2025-10-13 07:28:22] 2025-10-13 11:27:31,627 | INFO     | 
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | job summary report
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | --------------------------------------------------
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | PanDA job id: 6841070223
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | task id: 46676269
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | errors: (none)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:28:22] 2025-10-13 11:27:31,628 | INFO     | pilot state: finished 
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | transexitcode: 0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | exeerrorcode: 0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | exeerrordiag: 
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | exitcode: 0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | exitmsg: OK
[2025-10-13 07:28:22] 2025-10-13 11:27:31,629 | INFO     | cpuconsumptiontime: 70551 s
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | nevents: 400
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | neventsw: 0
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | pid: 7086
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | pgrp: 7086
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | corecount: 8
[2025-10-13 07:28:22] 2025-10-13 11:27:31,630 | INFO     | event service: False
[2025-10-13 07:28:22] 2025-10-13 11:27:31,631 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 9430: 2377595, 9431: 2386649, 9435: 2386851}
[2025-10-13 07:28:22] 2025-10-13 11:27:31,631 | INFO     | --------------------------------------------------
[2025-10-13 07:28:22] 2025-10-13 11:27:31,631 | INFO     | 
[2025-10-13 07:28:22] 2025-10-13 11:27:31,631 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:28:22] 2025-10-13 11:27:31,648 | INFO     | job 6841070223 has completed (purged errors)
[2025-10-13 07:28:22] 2025-10-13 11:27:31,648 | INFO     | overall cleanup function is called
[2025-10-13 07:28:22] 2025-10-13 11:27:32,655 | INFO     | --- collectZombieJob: --- 10, [7086]
[2025-10-13 07:28:22] 2025-10-13 11:27:32,655 | INFO     | zombie collector waiting for pid 7086
[2025-10-13 07:28:22] 2025-10-13 11:27:32,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:28:22] 2025-10-13 11:27:32,656 | INFO     | collected zombie processes
[2025-10-13 07:28:22] 2025-10-13 11:27:32,656 | INFO     | will attempt to kill all subprocesses of pid=7086
[2025-10-13 07:28:22] 2025-10-13 11:27:32,785 | INFO     | process IDs to be killed: [7086] (in reverse order)
[2025-10-13 07:28:22] 2025-10-13 11:27:32,828 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:28:22] 2025-10-13 11:27:32,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:28:22] 2025-10-13 11:27:32,832 | INFO     | did not find any defunct processes belonging to 7086
[2025-10-13 07:28:22] 2025-10-13 11:27:32,835 | INFO     | did not find any defunct processes belonging to 7086
[2025-10-13 07:28:22] 2025-10-13 11:27:32,835 | INFO     | ready for new job
[2025-10-13 07:28:22] 2025-10-13 11:27:32,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:28:22] 2025-10-13 11:27:32,837 | INFO     | ***************************************
[2025-10-13 07:28:22] 2025-10-13 11:27:32,837 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:28:22] 2025-10-13 11:27:32,837 | INFO     | ***************************************
[2025-10-13 07:28:22] 2025-10-13 11:27:32,837 | INFO     | 
[2025-10-13 07:28:22] 2025-10-13 11:27:32,838 | INFO     | architecture information:
[2025-10-13 07:28:22] 2025-10-13 11:27:32,839 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:28:22] 2025-10-13 11:27:32,847 | INFO     | cat /etc/os-release:
[2025-10-13 07:28:22] NAME="CentOS Linux"
[2025-10-13 07:28:22] VERSION="7 (Core)"
[2025-10-13 07:28:22] ID="centos"
[2025-10-13 07:28:22] ID_LIKE="rhel fedora"
[2025-10-13 07:28:22] VERSION_ID="7"
[2025-10-13 07:28:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:28:22] ANSI_COLOR="0;31"
[2025-10-13 07:28:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:28:22] HOME_URL="https://www.centos.org/"
[2025-10-13 07:28:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:28:22] 
[2025-10-13 07:28:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:28:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:28:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:28:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:28:22] 
[2025-10-13 07:28:22] 2025-10-13 11:27:32,848 | INFO     | ***************************************
[2025-10-13 07:28:22] 2025-10-13 11:27:33,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:28:22] 2025-10-13 11:27:33,361 | INFO     | sufficient remaining disk space (105943924736 B)
[2025-10-13 07:28:22] 2025-10-13 11:27:33,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | INFO     | update_server=False
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:28:22] 2025-10-13 11:27:33,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:28:22] 2025-10-13 11:27:33,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:28:22] 2025-10-13 11:27:33,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:28:22] 2025-10-13 11:27:33,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:28:22] 2025-10-13 11:27:33,582 | INFO     | will abort loop
[2025-10-13 07:28:22] 2025-10-13 11:27:33,784 | INFO     | all payload control threads have been joined
[2025-10-13 07:28:22] 2025-10-13 11:27:33,879 | INFO     | all data control threads have been joined
[2025-10-13 07:28:22] 2025-10-13 11:27:34,287 | INFO     | all job control threads have been joined
[2025-10-13 07:28:22] 2025-10-13 11:27:34,367 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,368 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,392 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,584 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,790 | INFO     | [payload] control thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,853 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:34,884 | INFO     | [data] control thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,156 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,292 | INFO     | [job] control thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,300 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,305 | INFO     | [job] validate thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,368 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,409 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:35,524 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:37,368 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:27:44,150 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:28:22] 2025-10-13 11:27:45,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:28:22] 2025-10-13 11:28:03,719 | INFO     | PID=48807 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:28:22] 2025-10-13 11:28:03,719 | INFO     | .. there are 2 such processes running
[2025-10-13 07:28:22] 2025-10-13 11:28:03,720 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:28:22] 2025-10-13 11:28:03,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:28:22] 2025-10-13 11:28:03,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:28:22] 2025-10-13 11:28:16,751 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:28:22] 2025-10-13 11:28:16,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597927421760)>', '<ExcThread(monitor, started 140597331474176)>']
[2025-10-13 07:28:22] 2025-10-13 11:28:17,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:28:22] 2025-10-13 11:28:17,783 | INFO     | [monitor] control thread has ended
[2025-10-13 07:28:22] 2025-10-13 11:28:21,994 | INFO     | all workflow threads have been joined
[2025-10-13 07:28:22] 2025-10-13 11:28:21,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:28:22] 2025-10-13 11:28:21,994 | INFO     | traces error code: 0
[2025-10-13 07:28:22] 2025-10-13 11:28:21,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:28:22] 2025-10-13 11:28:22,072 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:28:22] 2025-10-13 11:28:22,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:28:22] 2025-10-13 11:28:22,077 [wrapper] pilotpid: 48807
[2025-10-13 07:28:22] 2025-10-13 11:28:22,079 [wrapper] Pilot exit status: 0
[2025-10-13 07:28:22] 2025-10-13 11:28:22,087 [wrapper] pandaids: 6841070223
[2025-10-13 07:28:22] 2025-10-13 11:28:22,120 [wrapper] cleanup supervisor_pilot 43662 48808
[2025-10-13 07:28:22] 2025-10-13 11:28:22,122 [wrapper] Test setup, not cleaning
[2025-10-13 07:28:22] 2025-10-13 11:28:22,124 [wrapper] apfmon messages muted
[2025-10-13 07:28:22] 2025-10-13 11:28:22,126 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:28:22] 2025-10-13 11:28:22,128 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:28:22]  *** Error codes and diagnostics ***
[2025-10-13 07:28:22]     "exeErrorCode": 0,
[2025-10-13 07:28:22]     "exeErrorDiag": "",
[2025-10-13 07:28:22]     "pilotErrorCode": 0,
[2025-10-13 07:28:22]     "pilotErrorDiag": "",
[2025-10-13 07:28:22]  *** Listing of results directory ***
[2025-10-13 07:28:22] total 420004
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:23 queuedata.json
[2025-10-13 07:28:22] -rwx------ 1 boincer umatlas     36292 Oct 12 21:24 runpilot2-wrapper.sh
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:28:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:49 run_atlas
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:49 job.xml
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas 224270246 Oct 13 04:49 EVNT.46676267._004728.pool.root.1
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:49 start_atlas.sh
[2025-10-13 07:28:22] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:49 shared
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:49 input.tar.gz
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:49 boinc_lockfile
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 04:49 pandaJob.out
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas    972857 Oct 13 04:49 agis_schedconf.cvmfs.json
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas   1560580 Oct 13 04:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:28:22] drwx------ 5 boincer umatlas      4096 Oct 13 04:50 pilot3
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas      6035 Oct 13 07:18 init_data.xml
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas 198479529 Oct 13 07:26 HITS.46676269._094028.pool.root.1
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas      1045 Oct 13 07:27 memory_monitor_summary.json
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas    384912 Oct 13 07:27 log.46676269._094028.job.log.tgz.1
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas       529 Oct 13 07:27 boinc_task_state.xml
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas      7824 Oct 13 07:27 heartbeat.json
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas        95 Oct 13 07:28 pilot_heartbeat.json
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:28 boinc_mmap_file
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:28 wrapper_checkpoint.txt
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas      5080 Oct 13 07:28 pilotlog.txt
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas   1331756 Oct 13 07:28 log.46676269._094028.job.log.1
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas       357 Oct 13 07:28 output.list
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:28 runtime_log
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas   1740800 Oct 13 07:28 result.tar.gz
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas       656 Oct 13 07:28 YFOKDmXTMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtLmNDmZ1J1gm.diag
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas      8693 Oct 13 07:28 runtime_log.err
[2025-10-13 07:28:22] -rw-r--r-- 1 boincer umatlas     20867 Oct 13 07:28 stderr.txt
[2025-10-13 07:28:22] HITS file was successfully produced:
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas 198479529 Oct 13 07:26 shared/HITS.pool.root.1
[2025-10-13 07:28:22]  *** Contents of shared directory: ***
[2025-10-13 07:28:22] total 415124
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas 224270246 Oct 13 04:49 ATLAS.root_0
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:49 start_atlas.sh
[2025-10-13 07:28:22] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:49 input.tar.gz
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas 198479529 Oct 13 07:26 HITS.pool.root.1
[2025-10-13 07:28:22] -rw------- 1 boincer umatlas   1740800 Oct 13 07:28 result.tar.gz
07:28:23 (45138): run_atlas exited; CPU time 70753.904254
07:28:23 (45138): called boinc_finish(0)

</stderr_txt>
]]>

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