Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:47 (2697399): wrapper (7.7.26015): starting
06:32:47 (2697399): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 06:32:47] Arguments: --nthreads 9
[2025-10-13 06:32:47] Threads: 9
[2025-10-13 06:32:47] Checking for CVMFS
[2025-10-13 06:32:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:32:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:32:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:32:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:32:48] 2.13.2.0 1149533 130570 358684 151658 1 117 32740210 32935937 31948 16776704 0 264783044 99.633 243638610 20655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:32:48] CVMFS is ok
[2025-10-13 06:32:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:32:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:32:48] Further information can be found at the LHC@home message board.
[2025-10-13 06:32:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:32:48] Checking for apptainer binary...
[2025-10-13 06:32:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:32:48] Running /usr/bin/apptainer --version
[2025-10-13 06:32:48] apptainer version 1.4.3-1.el9
[2025-10-13 06:32:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:32:48] c6-2-11-4.aglt2.org
[2025-10-13 06:32:48] apptainer works
[2025-10-13 06:32:48] Set ATHENA_PROC_NUMBER=9
[2025-10-13 06:32:48] Set ATHENA_CORE_NUMBER=9
[2025-10-13 06:32:48] Starting ATLAS job with PandaID=6841124628
[2025-10-13 06:32:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:28:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:28:20] 2025-10-13 12:27:15,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:28:20] 2025-10-13 12:27:15,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:28:20] 2025-10-13 12:27:15,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:28:20] 2025-10-13 12:27:15,751 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:28:20] 2025-10-13 12:27:15,752 | INFO     | sum of square deviations: 435642492.25
[2025-10-13 08:28:20] 2025-10-13 12:27:15,756 | INFO     | sum of deviations: -12375273552.250004
[2025-10-13 08:28:20] 2025-10-13 12:27:15,757 | INFO     | mean x: 1760354999.625
[2025-10-13 08:28:20] 2025-10-13 12:27:15,757 | INFO     | mean y: 2254186.9464285714
[2025-10-13 08:28:20] 2025-10-13 12:27:15,757 | INFO     | -- intersect: 50008566833.16265
[2025-10-13 08:28:20] 2025-10-13 12:27:15,757 | INFO     | intersect: 50008566833.16265
[2025-10-13 08:28:20] 2025-10-13 12:27:15,757 | INFO     | chi2: 2.353400434889178
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | sum of square deviations: 379868972.1682245
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | sum of deviations: -4338671292.859816
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | mean x: 1760354847.130841
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | mean y: 2275523.7757009347
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | -- intersect: 20108158341.472397
[2025-10-13 08:28:20] 2025-10-13 12:27:15,758 | INFO     | intersect: 20108158341.472397
[2025-10-13 08:28:20] 2025-10-13 12:27:15,759 | INFO     | chi2: 1.6899967851009488
[2025-10-13 08:28:20] 2025-10-13 12:27:15,759 | INFO     | current chi2=1.6899967851009488 (change=28.189153021018676 %)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,759 | INFO     | sum of square deviations: 329058868.0882351
[2025-10-13 08:28:20] 2025-10-13 12:27:15,760 | INFO     | sum of deviations: -3836700166.0294123
[2025-10-13 08:28:20] 2025-10-13 12:27:15,764 | INFO     | mean x: 1760354694.6176472
[2025-10-13 08:28:20] 2025-10-13 12:27:15,764 | INFO     | mean y: 2277033.1274509802
[2025-10-13 08:28:20] 2025-10-13 12:27:15,764 | INFO     | -- intersect: 20527337452.70913
[2025-10-13 08:28:20] 2025-10-13 12:27:15,764 | INFO     | intersect: 20527337452.70913
[2025-10-13 08:28:20] 2025-10-13 12:27:15,765 | INFO     | chi2: 1.689311784668246
[2025-10-13 08:28:20] 2025-10-13 12:27:15,765 | INFO     | current chi2=1.689311784668246 (change=0.04053264708795833 %)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,765 | INFO     | right removable region: 101
[2025-10-13 08:28:20] 2025-10-13 12:27:15,765 | INFO     | sum of square deviations: 379860432.1682245
[2025-10-13 08:28:20] 2025-10-13 12:27:15,765 | INFO     | sum of deviations: -27849876705.364487
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | mean x: 1760355152.130841
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | mean y: 2295762.38317757
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | -- intersect: 129064629695.56213
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | intersect: 129064629695.56213
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | chi2: 0.8746513298200964
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | current chi2=0.8746513298200964 (change=62.83457261019484 %)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,766 | INFO     | sum of square deviations: 329061735.8431383
[2025-10-13 08:28:20] 2025-10-13 12:27:15,767 | INFO     | sum of deviations: -24271270492.019608
[2025-10-13 08:28:20] 2025-10-13 12:27:15,767 | INFO     | mean x: 1760355304.627451
[2025-10-13 08:28:20] 2025-10-13 12:27:15,767 | INFO     | mean y: 2284944.0784313725
[2025-10-13 08:28:20] 2025-10-13 12:27:15,767 | INFO     | -- intersect: 129844363516.96266
[2025-10-13 08:28:20] 2025-10-13 12:27:15,767 | INFO     | intersect: 129844363516.96266
[2025-10-13 08:28:20] 2025-10-13 12:27:15,768 | INFO     | chi2: 0.8721256506156322
[2025-10-13 08:28:20] 2025-10-13 12:27:15,772 | INFO     | current chi2=0.8721256506156322 (change=0.28876411872416896 %)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,772 | INFO     | left removable region: 20
[2025-10-13 08:28:20] 2025-10-13 12:27:15,772 | INFO     | sum of square deviations: 164786383.99999985
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | sum of deviations: -8462058350.666663
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | mean x: 1760355274.1111112
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | mean y: 2284987.6296296297
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | -- intersect: 90399493093.31902
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | intersect: 90399493093.31902
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | chi2: 0.1367137734695223
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | -- intersect: 90399493093.31902
[2025-10-13 08:28:20] 2025-10-13 12:27:15,773 | INFO     | current memory leak: -51.35 B/s (using 81 data points, chi2=0.14)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | could have reported an average CPU frequency of 2689 MHz (7 samples)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | ..............................
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . Timing measurements:
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . get job = 0 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . initial setup = 3 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . payload setup = 7 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . stage-in = 0 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . payload execution = 6805 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,774 | INFO     | . stage-out = 2 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,775 | INFO     | . log creation = 0 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,775 | INFO     | ..............................
[2025-10-13 08:28:20] 2025-10-13 12:27:15,986 | INFO     | 
[2025-10-13 08:28:20] 2025-10-13 12:27:15,987 | INFO     | job summary report
[2025-10-13 08:28:20] 2025-10-13 12:27:15,991 | INFO     | --------------------------------------------------
[2025-10-13 08:28:20] 2025-10-13 12:27:15,991 | INFO     | PanDA job id: 6841124628
[2025-10-13 08:28:20] 2025-10-13 12:27:15,991 | INFO     | task id: 46676269
[2025-10-13 08:28:20] 2025-10-13 12:27:15,991 | INFO     | errors: (none)
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | pilot state: finished 
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | transexitcode: 0
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | exeerrorcode: 0
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | exeerrordiag: 
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | exitcode: 0
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | exitmsg: OK
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | cpuconsumptiontime: 44327 s
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | nevents: 400
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | neventsw: 0
[2025-10-13 08:28:20] 2025-10-13 12:27:15,992 | INFO     | pid: 2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | pgrp: 2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | corecount: 9
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | event service: False
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | sizes: {0: 2348743, 1: 2348885, 6: 2349147, 11: 2349175, 6816: 2376396, 6819: 2385394, 6821: 2385578, 6835: 2385772}
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | --------------------------------------------------
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | 
[2025-10-13 08:28:20] 2025-10-13 12:27:15,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 08:28:20] 2025-10-13 12:27:16,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:28:20] 2025-10-13 12:27:16,024 | INFO     | job 6841124628 has completed (purged errors)
[2025-10-13 08:28:20] 2025-10-13 12:27:16,025 | INFO     | overall cleanup function is called
[2025-10-13 08:28:20] 2025-10-13 12:27:17,036 | INFO     | --- collectZombieJob: --- 10, [2710451]
[2025-10-13 08:28:20] 2025-10-13 12:27:17,036 | INFO     | zombie collector waiting for pid 2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:17,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:28:20] 2025-10-13 12:27:17,036 | INFO     | collected zombie processes
[2025-10-13 08:28:20] 2025-10-13 12:27:17,036 | INFO     | will attempt to kill all subprocesses of pid=2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:18,256 | INFO     | process IDs to be killed: [2710451] (in reverse order)
[2025-10-13 08:28:20] 2025-10-13 12:27:18,481 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:28:20] 2025-10-13 12:27:18,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:28:20] 2025-10-13 12:27:18,505 | INFO     | did not find any defunct processes belonging to 2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:18,528 | INFO     | did not find any defunct processes belonging to 2710451
[2025-10-13 08:28:20] 2025-10-13 12:27:18,529 | INFO     | ready for new job
[2025-10-13 08:28:20] 2025-10-13 12:27:18,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:28:20] 2025-10-13 12:27:18,531 | INFO     | ***************************************
[2025-10-13 08:28:20] 2025-10-13 12:27:18,532 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:28:20] 2025-10-13 12:27:18,532 | INFO     | ***************************************
[2025-10-13 08:28:20] 2025-10-13 12:27:18,532 | INFO     | 
[2025-10-13 08:28:20] 2025-10-13 12:27:18,551 | INFO     | architecture information:
[2025-10-13 08:28:20] 2025-10-13 12:27:18,551 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:28:20] 2025-10-13 12:27:18,576 | INFO     | cat /etc/os-release:
[2025-10-13 08:28:20] NAME="CentOS Linux"
[2025-10-13 08:28:20] VERSION="7 (Core)"
[2025-10-13 08:28:20] ID="centos"
[2025-10-13 08:28:20] ID_LIKE="rhel fedora"
[2025-10-13 08:28:20] VERSION_ID="7"
[2025-10-13 08:28:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:28:20] ANSI_COLOR="0;31"
[2025-10-13 08:28:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:28:20] HOME_URL="https://www.centos.org/"
[2025-10-13 08:28:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:28:20] 
[2025-10-13 08:28:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:28:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:28:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:28:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:28:20] 
[2025-10-13 08:28:20] 2025-10-13 12:27:18,577 | INFO     | ***************************************
[2025-10-13 08:28:20] 2025-10-13 12:27:19,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 08:28:20] 2025-10-13 12:27:19,107 | INFO     | sufficient remaining disk space (94268030976 B)
[2025-10-13 08:28:20] 2025-10-13 12:27:19,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:28:20] 2025-10-13 12:27:19,107 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:28:20] 2025-10-13 12:27:19,108 | INFO     | update_server=False
[2025-10-13 08:28:20] 2025-10-13 12:27:19,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:28:20] 2025-10-13 12:27:19,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:28:20] 2025-10-13 12:27:19,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:28:20] 2025-10-13 12:27:19,110 | INFO     | aborting loop
[2025-10-13 08:28:20] 2025-10-13 12:27:19,783 | INFO     | all job control threads have been joined
[2025-10-13 08:28:20] 2025-10-13 12:27:20,114 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,115 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,201 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,207 | INFO     | all data control threads have been joined
[2025-10-13 08:28:20] 2025-10-13 12:27:20,299 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,385 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,528 | INFO     | all payload control threads have been joined
[2025-10-13 08:28:20] 2025-10-13 12:27:20,556 | INFO     | [job] validate thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,789 | INFO     | [job] control thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:20,930 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:21,027 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:21,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:28:20] 2025-10-13 12:27:21,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:28:20] 2025-10-13 12:27:21,116 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:21,213 | INFO     | [data] control thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:21,534 | INFO     | [payload] control thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:21,665 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:22,051 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:25,120 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:28:20] 2025-10-13 12:27:48,795 | INFO     | PID=2702272 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:28:20] 2025-10-13 12:27:48,795 | INFO     | .. there are 37 such processes running
[2025-10-13 08:28:20] 2025-10-13 12:27:48,796 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:28:20] 2025-10-13 12:27:48,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:28:20] 2025-10-13 12:27:48,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:28:20] 2025-10-13 12:28:15,047 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:28:20] 2025-10-13 12:28:15,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120906487616)>', '<ExcThread(monitor, started 140120279738112)>']
[2025-10-13 08:28:20] 2025-10-13 12:28:15,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:28:20] 2025-10-13 12:28:15,975 | INFO     | [monitor] control thread has ended
[2025-10-13 08:28:20] 2025-10-13 12:28:20,427 | INFO     | all workflow threads have been joined
[2025-10-13 08:28:20] 2025-10-13 12:28:20,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:28:20] 2025-10-13 12:28:20,428 | INFO     | traces error code: 0
[2025-10-13 08:28:20] 2025-10-13 12:28:20,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:28:20] 2025-10-13 12:28:20,676 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:28:20] 2025-10-13 12:28:20,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:28:20] 2025-10-13 12:28:20,683 [wrapper] pilotpid: 2702272
[2025-10-13 08:28:20] 2025-10-13 12:28:20,686 [wrapper] Pilot exit status: 0
[2025-10-13 08:28:20] 2025-10-13 12:28:20,700 [wrapper] pandaids: 6841124628
[2025-10-13 08:28:20] 2025-10-13 12:28:20,806 [wrapper] cleanup supervisor_pilot 3033854 2702273
[2025-10-13 08:28:20] 2025-10-13 12:28:20,810 [wrapper] Test setup, not cleaning
[2025-10-13 08:28:20] 2025-10-13 12:28:20,813 [wrapper] apfmon messages muted
[2025-10-13 08:28:20] 2025-10-13 12:28:20,816 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:28:20] 2025-10-13 12:28:20,820 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:28:20]  *** Error codes and diagnostics ***
[2025-10-13 08:28:20]     "exeErrorCode": 0,
[2025-10-13 08:28:20]     "exeErrorDiag": "",
[2025-10-13 08:28:20]     "pilotErrorCode": 0,
[2025-10-13 08:28:20]     "pilotErrorDiag": "",
[2025-10-13 08:28:20]  *** Listing of results directory ***
[2025-10-13 08:28:20] total 411708
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:03 queuedata.json
[2025-10-13 08:28:20] -rwx------. 1 boincer umatlas     36292 Oct 12 22:04 runpilot2-wrapper.sh
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:28:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:32 run_atlas
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:32 job.xml
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas 220355901 Oct 13 06:32 EVNT.46676267._004375.pool.root.1
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 06:32 input.tar.gz
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:32 start_atlas.sh
[2025-10-13 08:28:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:32 shared
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:32 boinc_lockfile
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 06:32 pandaJob.out
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas    972497 Oct 13 06:33 agis_schedconf.cvmfs.json
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:28:20] drwx------. 5 boincer umatlas      4096 Oct 13 06:33 pilot3
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 08:19 init_data.xml
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas 194713848 Oct 13 08:26 HITS.46676269._094495.pool.root.1
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas       529 Oct 13 08:26 boinc_task_state.xml
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas      1041 Oct 13 08:26 memory_monitor_summary.json
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas    371417 Oct 13 08:26 log.46676269._094495.job.log.tgz.1
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas        95 Oct 13 08:27 pilot_heartbeat.json
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas      7824 Oct 13 08:27 heartbeat.json
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:27 boinc_mmap_file
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:27 wrapper_checkpoint.txt
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas      4824 Oct 13 08:28 pilotlog.txt
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas    937743 Oct 13 08:28 log.46676269._094495.job.log.1
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas       357 Oct 13 08:28 output.list
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:28 runtime_log
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas   1331200 Oct 13 08:28 result.tar.gz
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas       653 Oct 13 08:28 yjBODmj6MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVRmNDmVzsWmm.diag
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 08:28 runtime_log.err
[2025-10-13 08:28:20] -rw-r--r--. 1 boincer umatlas     20973 Oct 13 08:28 stderr.txt
[2025-10-13 08:28:20] HITS file was successfully produced:
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas 194713848 Oct 13 08:26 shared/HITS.pool.root.1
[2025-10-13 08:28:20]  *** Contents of shared directory: ***
[2025-10-13 08:28:20] total 407228
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas 220355901 Oct 13 06:32 ATLAS.root_0
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 06:32 input.tar.gz
[2025-10-13 08:28:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:32 start_atlas.sh
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas 194713848 Oct 13 08:26 HITS.pool.root.1
[2025-10-13 08:28:20] -rw-------. 1 boincer umatlas   1331200 Oct 13 08:28 result.tar.gz
08:28:22 (2697399): run_atlas exited; CPU time 44632.748044
08:28:22 (2697399): called boinc_finish(0)

</stderr_txt>
]]>

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