Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:47:33 (1223259): wrapper (7.7.26015): starting
04:47:33 (1223259): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:47:33] Arguments: --nthreads 8
[2025-10-13 04:47:33] Threads: 8
[2025-10-13 04:47:33] Checking for CVMFS
[2025-10-13 04:47:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:47:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:47:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:47:35] 2.13.2.0 2815078 130464 446776 151654 3 260 31160260 32947200 38206 16776704 0 268660675 99.645 252171237 21355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:47:35] CVMFS is ok
[2025-10-13 04:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:47:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:47:35] Further information can be found at the LHC@home message board.
[2025-10-13 04:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:47:35] Checking for apptainer binary...
[2025-10-13 04:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:47:35] Running /usr/bin/apptainer --version
[2025-10-13 04:47:35] apptainer version 1.4.3-1.el9
[2025-10-13 04:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:47:36] c6-6-8-2.aglt2.org
[2025-10-13 04:47:36] apptainer works
[2025-10-13 04:47:36] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:47:36] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:47:36] Starting ATLAS job with PandaID=6837558641
[2025-10-13 04:47:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:40:04 (1223259): BOINC client no longer exists - exiting
05:40:04 (1223259): timer handler: client dead, exiting
05:46:29 (1406708): wrapper (7.7.26015): starting
05:46:29 (1406708): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 05:46:29] Arguments: --nthreads 9
[2025-10-13 05:46:29] Threads: 9
[2025-10-13 05:46:29] This job has been restarted, cleaning up previous attempt
[2025-10-13 05:46:29] Checking for CVMFS
[2025-10-13 05:46:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:46:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:46:31] 2.13.2.0 2815078 130523 440712 151656 0 211 31323340 32947200 34515 16776704 0 268871980 99.646 252174042 21355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:46:31] CVMFS is ok
[2025-10-13 05:46:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:46:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:46:31] Further information can be found at the LHC@home message board.
[2025-10-13 05:46:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:46:31] Checking for apptainer binary...
[2025-10-13 05:46:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:46:31] Running /usr/bin/apptainer --version
[2025-10-13 05:46:31] apptainer version 1.4.3-1.el9
[2025-10-13 05:46:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:46:32] c6-6-8-2.aglt2.org
[2025-10-13 05:46:32] apptainer works
[2025-10-13 05:46:32] Set ATHENA_PROC_NUMBER=9
[2025-10-13 05:46:32] Set ATHENA_CORE_NUMBER=9
[2025-10-13 05:46:32] Starting ATLAS job with PandaID=6837558641
[2025-10-13 05:46:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:41:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:41:14] 2025-10-13 14:40:16,780 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:41:14] 2025-10-13 14:40:16,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:41:14] 2025-10-13 14:40:16,786 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:41:14] 2025-10-13 14:40:16,786 | INFO     | sum of square deviations: 7253663801.622331
[2025-10-13 10:41:14] 2025-10-13 14:40:16,789 | INFO     | sum of deviations: 39068173579.818184
[2025-10-13 10:41:14] 2025-10-13 14:40:16,789 | INFO     | mean x: 1760357676.7202797
[2025-10-13 10:41:14] 2025-10-13 14:40:16,789 | INFO     | mean y: 2248636.272727273
[2025-10-13 10:41:14] 2025-10-13 14:40:16,789 | INFO     | -- intersect: -9479023332.97564
[2025-10-13 10:41:14] 2025-10-13 14:40:16,789 | INFO     | intersect: -9479023332.97564
[2025-10-13 10:41:14] 2025-10-13 14:40:16,790 | INFO     | chi2: 2.3334587296060967
[2025-10-13 10:41:14] 2025-10-13 14:40:16,790 | INFO     | sum of square deviations: 6879843448.8754425
[2025-10-13 10:41:14] 2025-10-13 14:40:16,792 | INFO     | sum of deviations: 56589815476.64059
[2025-10-13 10:41:14] 2025-10-13 14:40:16,793 | INFO     | mean x: 1760357524.2241993
[2025-10-13 10:41:14] 2025-10-13 14:40:16,793 | INFO     | mean y: 2255691.846975089
[2025-10-13 10:41:14] 2025-10-13 14:40:16,793 | INFO     | -- intersect: -14477478942.964605
[2025-10-13 10:41:14] 2025-10-13 14:40:16,793 | INFO     | intersect: -14477478942.964605
[2025-10-13 10:41:14] 2025-10-13 14:40:16,793 | INFO     | chi2: 1.6439437895590208
[2025-10-13 10:41:14] 2025-10-13 14:40:16,794 | INFO     | current chi2=1.6439437895590208 (change=29.549052284437472 %)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,794 | INFO     | sum of square deviations: 6519093108.619537
[2025-10-13 10:41:14] 2025-10-13 14:40:16,796 | INFO     | sum of deviations: 56240613890.88043
[2025-10-13 10:41:14] 2025-10-13 14:40:16,796 | INFO     | mean x: 1760357371.7282608
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | mean y: 2255541.438405797
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | -- intersect: -15184454880.358112
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | intersect: -15184454880.358112
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | chi2: 1.6422175958053817
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | current chi2=1.6422175958053817 (change=0.10500321024370728 %)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,797 | INFO     | right removable region: 275
[2025-10-13 10:41:14] 2025-10-13 14:40:16,798 | INFO     | sum of square deviations: 6879805018.8754425
[2025-10-13 10:41:14] 2025-10-13 14:40:16,800 | INFO     | sum of deviations: -6182135612.854092
[2025-10-13 10:41:14] 2025-10-13 14:40:16,800 | INFO     | mean x: 1760357829.2241993
[2025-10-13 10:41:14] 2025-10-13 14:40:16,801 | INFO     | mean y: 2266971.537366548
[2025-10-13 10:41:14] 2025-10-13 14:40:16,801 | INFO     | -- intersect: 1584109886.787938
[2025-10-13 10:41:14] 2025-10-13 14:40:16,801 | INFO     | intersect: 1584109886.787938
[2025-10-13 10:41:14] 2025-10-13 14:40:16,801 | INFO     | chi2: 0.727835399443121
[2025-10-13 10:41:14] 2025-10-13 14:40:16,801 | INFO     | current chi2=0.727835399443121 (change=68.8087305676932 %)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,802 | INFO     | sum of square deviations: 6519033633.072446
[2025-10-13 10:41:14] 2025-10-13 14:40:16,804 | INFO     | sum of deviations: -6256215510.840584
[2025-10-13 10:41:14] 2025-10-13 14:40:16,804 | INFO     | mean x: 1760357981.7246377
[2025-10-13 10:41:14] 2025-10-13 14:40:16,804 | INFO     | mean y: 2267002.8442028984
[2025-10-13 10:41:14] 2025-10-13 14:40:16,804 | INFO     | -- intersect: 1691655266.4705021
[2025-10-13 10:41:14] 2025-10-13 14:40:16,804 | INFO     | intersect: 1691655266.4705021
[2025-10-13 10:41:14] 2025-10-13 14:40:16,805 | INFO     | chi2: 0.727890081075603
[2025-10-13 10:41:14] 2025-10-13 14:40:16,805 | INFO     | current chi2=0.727890081075603 (change=-0.007512911919899733 %)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,805 | INFO     | left removable region: 20
[2025-10-13 10:41:14] 2025-10-13 14:40:16,806 | INFO     | sum of square deviations: 5141297818.407869
[2025-10-13 10:41:14] 2025-10-13 14:40:16,807 | INFO     | sum of deviations: 11563633401.039215
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | mean x: 1760357951.2392156
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | mean y: 2274796.1960784313
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | -- intersect: -3957062850.001305
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | intersect: -3957062850.001305
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | chi2: 0.022001547254699518
[2025-10-13 10:41:14] 2025-10-13 14:40:16,808 | INFO     | -- intersect: -3957062850.001305
[2025-10-13 10:41:14] 2025-10-13 14:40:16,809 | INFO     | current memory leak: 2.25 B/s (using 255 data points, chi2=0.02)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,809 | INFO     | could have reported an average CPU frequency of 2579 MHz (13 samples)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,809 | INFO     | ..............................
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . Timing measurements:
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . get job = 0 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . initial setup = 2 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . payload setup = 38 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . stage-in = 0 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . payload execution = 17426 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . stage-out = 6 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | . log creation = 0 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,810 | INFO     | ..............................
[2025-10-13 10:41:14] 2025-10-13 14:40:16,991 | INFO     | 
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | job summary report
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | --------------------------------------------------
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | PanDA job id: 6837558641
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | task id: 46676269
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | errors: (none)
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | pilot state: finished 
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | transexitcode: 0
[2025-10-13 10:41:14] 2025-10-13 14:40:16,992 | INFO     | exeerrorcode: 0
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | exeerrordiag: 
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | exitcode: 0
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | exitmsg: OK
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | cpuconsumptiontime: 47153 s
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | nevents: 400
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | neventsw: 0
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | pid: 1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | pgrp: 1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | corecount: 9
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | event service: False
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | sizes: {0: 2348628, 1: 2348684, 2: 2348740, 3: 2348911, 4: 2348967, 15: 2348967, 26: 2349123, 33: 2349413, 37: 2349469, 17470: 2381661, 17471: 2381660, 17477: 2390
[2025-10-13 10:41:14] 2025-10-13 14:40:16,993 | INFO     | --------------------------------------------------
[2025-10-13 10:41:14] 2025-10-13 14:40:16,994 | INFO     | 
[2025-10-13 10:41:14] 2025-10-13 14:40:16,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 10:41:14] 2025-10-13 14:40:17,009 | INFO     | time since job start (17563s) is within the limit (172800.0s)
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:41:14] 2025-10-13 14:40:17,047 | INFO     | job 6837558641 has completed (purged errors)
[2025-10-13 10:41:14] 2025-10-13 14:40:17,047 | INFO     | overall cleanup function is called
[2025-10-13 10:41:14] 2025-10-13 14:40:18,060 | INFO     | --- collectZombieJob: --- 10, [1460965]
[2025-10-13 10:41:14] 2025-10-13 14:40:18,060 | INFO     | zombie collector waiting for pid 1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:18,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:41:14] 2025-10-13 14:40:18,060 | INFO     | collected zombie processes
[2025-10-13 10:41:14] 2025-10-13 14:40:18,060 | INFO     | will attempt to kill all subprocesses of pid=1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:19,841 | INFO     | process IDs to be killed: [1460965] (in reverse order)
[2025-10-13 10:41:14] 2025-10-13 14:40:20,194 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:41:14] 2025-10-13 14:40:20,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:41:14] 2025-10-13 14:40:20,230 | INFO     | did not find any defunct processes belonging to 1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:20,267 | INFO     | did not find any defunct processes belonging to 1460965
[2025-10-13 10:41:14] 2025-10-13 14:40:20,268 | INFO     | ready for new job
[2025-10-13 10:41:14] 2025-10-13 14:40:20,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:41:14] 2025-10-13 14:40:20,270 | INFO     | ***************************************
[2025-10-13 10:41:14] 2025-10-13 14:40:20,275 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:41:14] 2025-10-13 14:40:20,275 | INFO     | ***************************************
[2025-10-13 10:41:14] 2025-10-13 14:40:20,275 | INFO     | 
[2025-10-13 10:41:14] 2025-10-13 14:40:20,298 | INFO     | architecture information:
[2025-10-13 10:41:14] 2025-10-13 14:40:20,302 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:41:14] 2025-10-13 14:40:20,362 | INFO     | cat /etc/os-release:
[2025-10-13 10:41:14] NAME="CentOS Linux"
[2025-10-13 10:41:14] VERSION="7 (Core)"
[2025-10-13 10:41:14] ID="centos"
[2025-10-13 10:41:14] ID_LIKE="rhel fedora"
[2025-10-13 10:41:14] VERSION_ID="7"
[2025-10-13 10:41:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:41:14] ANSI_COLOR="0;31"
[2025-10-13 10:41:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:41:14] HOME_URL="https://www.centos.org/"
[2025-10-13 10:41:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:41:14] 
[2025-10-13 10:41:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:41:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:41:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:41:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:41:14] 
[2025-10-13 10:41:14] 2025-10-13 14:40:20,362 | INFO     | ***************************************
[2025-10-13 10:41:14] 2025-10-13 14:40:20,868 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 10:41:14] 2025-10-13 14:40:20,943 | INFO     | sufficient remaining disk space (73958162432 B)
[2025-10-13 10:41:14] 2025-10-13 14:40:20,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:41:14] 2025-10-13 14:40:20,944 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:41:14] 2025-10-13 14:40:20,944 | INFO     | update_server=False
[2025-10-13 10:41:14] 2025-10-13 14:40:20,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:41:14] 2025-10-13 14:40:20,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:41:14] 2025-10-13 14:40:20,945 | INFO     | aborting loop
[2025-10-13 10:41:14] 2025-10-13 14:40:21,339 | INFO     | all payload control threads have been joined
[2025-10-13 10:41:14] 2025-10-13 14:40:21,487 | INFO     | all data control threads have been joined
[2025-10-13 10:41:14] 2025-10-13 14:40:21,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:41:14] 2025-10-13 14:40:21,807 | INFO     | all job control threads have been joined
[2025-10-13 10:41:14] 2025-10-13 14:40:21,951 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:21,952 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:41:14] 2025-10-13 14:40:22,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:41:14] 2025-10-13 14:40:22,039 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,152 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,345 | INFO     | [payload] control thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,493 | INFO     | [data] control thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,582 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,813 | INFO     | [job] control thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:22,994 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:23,035 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:23,035 | INFO     | [job] validate thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:23,042 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:23,079 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:23,665 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:26,038 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:41:14] 2025-10-13 14:40:51,718 | INFO     | PID=1427095 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:41:14] 2025-10-13 14:40:51,718 | INFO     | .. there are 29 such processes running
[2025-10-13 10:41:14] 2025-10-13 14:40:51,719 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:41:14] 2025-10-13 14:40:51,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:41:14] 2025-10-13 14:40:51,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:41:14] 2025-10-13 14:41:05,774 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:41:14] 2025-10-13 14:41:07,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547235112768)>', '<ExcThread(monitor, started 140546722998016)>']
[2025-10-13 10:41:14] 2025-10-13 14:41:07,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:41:14] 2025-10-13 14:41:07,857 | INFO     | [monitor] control thread has ended
[2025-10-13 10:41:14] 2025-10-13 14:41:12,804 | INFO     | all workflow threads have been joined
[2025-10-13 10:41:14] 2025-10-13 14:41:12,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:41:14] 2025-10-13 14:41:12,804 | INFO     | traces error code: 0
[2025-10-13 10:41:14] 2025-10-13 14:41:12,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:41:14] 2025-10-13 14:41:13,270 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:41:14] 2025-10-13 14:41:13,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:41:14] 2025-10-13 14:41:13,340 [wrapper] pilotpid: 1427095
[2025-10-13 10:41:14] 2025-10-13 14:41:13,369 [wrapper] Pilot exit status: 0
[2025-10-13 10:41:14] 2025-10-13 14:41:13,577 [wrapper] pandaids: 6837558641 6837558641
[2025-10-13 10:41:14] 2025-10-13 14:41:13,866 [wrapper] cleanup supervisor_pilot 2426793 1427096
[2025-10-13 10:41:14] 2025-10-13 14:41:13,879 [wrapper] Test setup, not cleaning
[2025-10-13 10:41:14] 2025-10-13 14:41:13,902 [wrapper] apfmon messages muted
[2025-10-13 10:41:14] 2025-10-13 14:41:13,912 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:41:14] 2025-10-13 14:41:13,930 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:41:14]  *** Error codes and diagnostics ***
[2025-10-13 10:41:14]     "exeErrorCode": 0,
[2025-10-13 10:41:14]     "exeErrorDiag": "",
[2025-10-13 10:41:14]     "pilotErrorCode": 0,
[2025-10-13 10:41:14]     "pilotErrorDiag": "",
[2025-10-13 10:41:14]  *** Listing of results directory ***
[2025-10-13 10:41:14] total 629764
[2025-10-13 10:41:14] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 06:29 pilot3.tar.gz
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 06:35 queuedata.json
[2025-10-13 10:41:14] -rwx------ 1 boincer umatlas     36292 Oct 10 06:36 runpilot2-wrapper.sh
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:41:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:47 run_atlas
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:47 job.xml
[2025-10-13 10:41:14] -rw-r--r-- 3 boincer umatlas 221040085 Oct 13 04:47 EVNT.46676267._001502.pool.root.1
[2025-10-13 10:41:14] -rw-r--r-- 3 boincer umatlas 221040085 Oct 13 04:47 ATLAS.root_0
[2025-10-13 10:41:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:47 start_atlas.sh
[2025-10-13 10:41:14] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:47 shared
[2025-10-13 10:41:14] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:47 input.tar.gz
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:47 boinc_lockfile
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 05:46 pandaJob.out
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas    972849 Oct 13 05:47 agis_schedconf.cvmfs.json
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas      6858 Oct 13 10:36 init_data.xml
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas 193727121 Oct 13 10:39 HITS.46676269._036963.pool.root.1
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas       531 Oct 13 10:39 boinc_task_state.xml
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas      1054 Oct 13 10:39 memory_monitor_summary.json
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas   1560580 Oct 13 10:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas    493337 Oct 13 10:39 log.46676269._036963.job.log.tgz.1
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas      7848 Oct 13 10:40 heartbeat.json
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas        96 Oct 13 10:40 pilot_heartbeat.json
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas        28 Oct 13 10:40 wrapper_checkpoint.txt
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 10:40 boinc_mmap_file
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas      4824 Oct 13 10:41 pilotlog.txt
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas   2089436 Oct 13 10:41 log.46676269._036963.job.log.1
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas       357 Oct 13 10:41 output.list
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas       620 Oct 13 10:41 runtime_log
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas   2600960 Oct 13 10:41 result.tar.gz
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas       783 Oct 13 10:41 YoWMDm6ePR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP4cNDmxUZdXo.diag
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas      8789 Oct 13 10:41 runtime_log.err
[2025-10-13 10:41:14] -rw-r--r-- 1 boincer umatlas     23343 Oct 13 10:41 stderr.txt
[2025-10-13 10:41:14] HITS file was successfully produced:
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas 193727121 Oct 13 10:39 shared/HITS.pool.root.1
[2025-10-13 10:41:14]  *** Contents of shared directory: ***
[2025-10-13 10:41:14] total 408172
[2025-10-13 10:41:14] -rw-r--r-- 3 boincer umatlas 221040085 Oct 13 04:47 ATLAS.root_0
[2025-10-13 10:41:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:47 start_atlas.sh
[2025-10-13 10:41:14] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:47 input.tar.gz
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas 193727121 Oct 13 10:39 HITS.pool.root.1
[2025-10-13 10:41:14] -rw------- 1 boincer umatlas   2600960 Oct 13 10:41 result.tar.gz
10:41:16 (1406708): run_atlas exited; CPU time 47944.872817
10:41:16 (1406708): called boinc_finish(0)

</stderr_txt>
]]>

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