Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:38:54 (2856638): wrapper (7.7.26015): starting
08:38:54 (2856638): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 08:38:54] Arguments: --nthreads 6
[2025-10-14 08:38:54] Threads: 6
[2025-10-14 08:38:54] Checking for CVMFS
[2025-10-14 08:38:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 08:38:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 08:38:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 08:38:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 08:38:55] 2.11.5.0 2717720 198 58724 151677 1 57 42966582 52428801 0 130560 0 434735 99.991 10763 20 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-14 08:38:55] CVMFS is ok
[2025-10-14 08:38:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 08:38:55] Checking for apptainer binary...
[2025-10-14 08:38:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 08:38:55] Running /usr/bin/apptainer --version
[2025-10-14 08:38:55] apptainer version 1.3.6-1.el9
[2025-10-14 08:38:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 08:38:55] testio002
[2025-10-14 08:38:55] apptainer works
[2025-10-14 08:38:55] Set ATHENA_PROC_NUMBER=6
[2025-10-14 08:38:55] Set ATHENA_CORE_NUMBER=6
[2025-10-14 08:38:55] Starting ATLAS job with PandaID=6842462967
[2025-10-14 08:38:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 09:37:14]  *** The last 200 lines of the pilot log: ***
[2025-10-14 09:37:14]  storage_token=
[2025-10-14 09:37:14]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6842462967/log.46676269._096255.job.log.tgz.1
[2025-10-14 09:37:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/23/log.46676269._096255.job.log.tgz.1
[2025-10-14 09:37:14]  workdir=None
[2025-10-14 09:37:14] ]
[2025-10-14 09:37:14] 2025-10-14 00:36:12,193 | INFO     | transferring file log.46676269._096255.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6842462967/log.46676269._096255.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 09:37:14] 2025-10-14 00:36:12,193 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6842462967/log.46676269._096255.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._096255.job
[2025-10-14 09:37:14] 2025-10-14 00:36:12,200 | INFO     | adding to output.list: log.46676269._096255.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/23/log.46676269._096255.job.log.tg
[2025-10-14 09:37:14] 2025-10-14 00:36:12,200 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 09:37:14] 2025-10-14 00:36:12,200 | INFO     | summary of transferred files:
[2025-10-14 09:37:14] 2025-10-14 00:36:12,200 | INFO     |  -- lfn=log.46676269._096255.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 09:37:14] 2025-10-14 00:36:12,200 | INFO     | stage-out finished correctly
[2025-10-14 09:37:14] 2025-10-14 00:36:13,462 | INFO     | time since job start (3431s) is within the limit (172800.0s)
[2025-10-14 09:37:14] 2025-10-14 00:36:14,368 | INFO     | monitor loop #259: job 0:6842462967 is in state 'finished'
[2025-10-14 09:37:14] 2025-10-14 00:36:14,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:37:14] 2025-10-14 00:36:15,467 | INFO     | time since job start (3433s) is within the limit (172800.0s)
[2025-10-14 09:37:14] 2025-10-14 00:36:15,638 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 09:37:14] 2025-10-14 00:36:16,870 | INFO     | monitor loop #260: job 0:6842462967 is in state 'finished'
[2025-10-14 09:37:14] 2025-10-14 00:36:16,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | job 6842462967 has state=finished
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | preparing for final server update for job 6842462967 in state='finished'
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | this job has now completed (state=finished)
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | log transfer has been attempted: DONE
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | job 6842462967 has finished - writing final server update
[2025-10-14 09:37:14] 2025-10-14 00:36:17,231 | INFO     | total number of processed events: 400 (read)
[2025-10-14 09:37:14] 2025-10-14 00:36:17,232 | INFO     | executing command: lscpu
[2025-10-14 09:37:14] 2025-10-14 00:36:17,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 09:37:14] 2025-10-14 00:36:17,472 | INFO     | time since job start (3435s) is within the limit (172800.0s)
[2025-10-14 09:37:14] 2025-10-14 00:36:19,373 | INFO     | monitor loop #261: job 0:6842462967 is in state 'finished'
[2025-10-14 09:37:14] 2025-10-14 00:36:19,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:37:14] 2025-10-14 00:36:19,478 | INFO     | time since job start (3437s) is within the limit (172800.0s)
[2025-10-14 09:37:14] 2025-10-14 00:36:21,483 | INFO     | time since job start (3439s) is within the limit (172800.0s)
[2025-10-14 09:37:14] 2025-10-14 00:36:21,876 | INFO     | monitor loop #262: job 0:6842462967 is in state 'finished'
[2025-10-14 09:37:14] 2025-10-14 00:36:21,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:37:14] 2025-10-14 00:36:22,562 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 09:37:14] 2025-10-14 00:36:22,563 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4399.7230625
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6842462967/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | INFO     | extracted standard info from prmon json
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 09:37:14] 2025-10-14 00:36:22,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | fitting pss+swap vs Time
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | sum of square deviations: 36466303.673469424
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | sum of deviations: -3027798357.1836734
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | mean x: 1760400528.0816326
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | mean y: 2557883.7959183673
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | -- intersect: 146168669882.3835
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | intersect: 146168669882.3835
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | chi2: 0.026046414329978534
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | -- intersect: 146168669882.3835
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | current memory leak: -83.03 B/s (using 49 data points, chi2=0.03)
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | could have reported an average CPU frequency of 4409 MHz (5 samples)
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | ..............................
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . Timing measurements:
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . get job = 0 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . initial setup = 4 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . payload setup = 2 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . stage-in = 0 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . payload execution = 3411 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . stage-out = 0 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | . log creation = 0 s
[2025-10-14 09:37:14] 2025-10-14 00:36:22,565 | INFO     | ..............................
[2025-10-14 09:37:14] 2025-10-14 00:36:23,035 | INFO     | 
[2025-10-14 09:37:14] 2025-10-14 00:36:23,035 | INFO     | job summary report
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | --------------------------------------------------
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | PanDA job id: 6842462967
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | task id: 46676269
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | errors: (none)
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | pilot state: finished 
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | transexitcode: 0
[2025-10-14 09:37:14] 2025-10-14 00:36:23,036 | INFO     | exeerrorcode: 0
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | exeerrordiag: 
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | exitcode: 0
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | exitmsg: OK
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | cpuconsumptiontime: 18548 s
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | nevents: 400
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | neventsw: 0
[2025-10-14 09:37:14] 2025-10-14 00:36:23,037 | INFO     | pid: 2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:23,038 | INFO     | pgrp: 2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:23,038 | INFO     | corecount: 6
[2025-10-14 09:37:14] 2025-10-14 00:36:23,038 | INFO     | event service: False
[2025-10-14 09:37:14] 2025-10-14 00:36:23,038 | INFO     | sizes: {0: 2348805, 1: 2349067, 10: 2349095, 3417: 2374762, 3418: 2383760, 3421: 2383816, 3428: 2384170}
[2025-10-14 09:37:14] 2025-10-14 00:36:23,038 | INFO     | --------------------------------------------------
[2025-10-14 09:37:14] 2025-10-14 00:36:23,039 | INFO     | 
[2025-10-14 09:37:14] 2025-10-14 00:36:23,039 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | job 6842462967 has completed (purged errors)
[2025-10-14 09:37:14] 2025-10-14 00:36:23,050 | INFO     | overall cleanup function is called
[2025-10-14 09:37:14] 2025-10-14 00:36:24,056 | INFO     | --- collectZombieJob: --- 10, [2878052]
[2025-10-14 09:37:14] 2025-10-14 00:36:24,057 | INFO     | zombie collector waiting for pid 2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:24,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 09:37:14] 2025-10-14 00:36:24,057 | INFO     | collected zombie processes
[2025-10-14 09:37:14] 2025-10-14 00:36:24,057 | INFO     | will attempt to kill all subprocesses of pid=2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:24,088 | INFO     | process IDs to be killed: [2878052] (in reverse order)
[2025-10-14 09:37:14] 2025-10-14 00:36:24,101 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 09:37:14] 2025-10-14 00:36:24,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 09:37:14] 2025-10-14 00:36:24,102 | INFO     | did not find any defunct processes belonging to 2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | did not find any defunct processes belonging to 2878052
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | ready for new job
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | ***************************************
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | ***************************************
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | 
[2025-10-14 09:37:14] 2025-10-14 00:36:24,103 | INFO     | architecture information:
[2025-10-14 09:37:14] 2025-10-14 00:36:24,104 | INFO     | executing command: cat /etc/os-release
[2025-10-14 09:37:14] 2025-10-14 00:36:24,107 | INFO     | cat /etc/os-release:
[2025-10-14 09:37:14] NAME="CentOS Linux"
[2025-10-14 09:37:14] VERSION="7 (Core)"
[2025-10-14 09:37:14] ID="centos"
[2025-10-14 09:37:14] ID_LIKE="rhel fedora"
[2025-10-14 09:37:14] VERSION_ID="7"
[2025-10-14 09:37:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 09:37:14] ANSI_COLOR="0;31"
[2025-10-14 09:37:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 09:37:14] HOME_URL="https://www.centos.org/"
[2025-10-14 09:37:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 09:37:14] 
[2025-10-14 09:37:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 09:37:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 09:37:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 09:37:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 09:37:14] 
[2025-10-14 09:37:14] 2025-10-14 00:36:24,108 | INFO     | ***************************************
[2025-10-14 09:37:14] 2025-10-14 00:36:24,611 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-14 09:37:14] 2025-10-14 00:36:24,630 | INFO     | sufficient remaining disk space (303453700096 B)
[2025-10-14 09:37:14] 2025-10-14 00:36:24,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 09:37:14] 2025-10-14 00:36:24,631 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 09:37:14] 2025-10-14 00:36:24,631 | INFO     | update_server=False
[2025-10-14 09:37:14] 2025-10-14 00:36:24,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 09:37:14] 2025-10-14 00:36:24,661 | INFO     | all payload control threads have been joined
[2025-10-14 09:37:14] 2025-10-14 00:36:24,737 | INFO     | all data control threads have been joined
[2025-10-14 09:37:14] 2025-10-14 00:36:25,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 09:37:14] 2025-10-14 00:36:25,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:37:14] 2025-10-14 00:36:25,385 | INFO     | aborting loop
[2025-10-14 09:37:14] 2025-10-14 00:36:25,397 | INFO     | all job control threads have been joined
[2025-10-14 09:37:14] 2025-10-14 00:36:25,637 | INFO     | [job] retrieve thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:25,667 | INFO     | [payload] control thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:25,725 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:25,743 | INFO     | [data] control thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:25,986 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:26,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 09:37:14] 2025-10-14 00:36:26,391 | INFO     | [job] job monitor thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:26,403 | INFO     | [job] control thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:26,451 | INFO     | [payload] failed_post thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:26,843 | INFO     | [data] copytool_in thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:26,969 | INFO     | [payload] validate_post thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:27,048 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:27,049 | INFO     | [job] validate thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:27,246 | INFO     | [data] copytool_out thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:27,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:37:14] 2025-10-14 00:36:28,608 | INFO     | [job] queue monitor thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:30,177 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:35,642 | INFO     | job.realtimelogging is not enabled
[2025-10-14 09:37:14] 2025-10-14 00:36:36,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 09:37:14] 2025-10-14 00:36:54,609 | INFO     | PID=2863463 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 09:37:14] 2025-10-14 00:36:54,609 | INFO     | .. there are 2 such processes running
[2025-10-14 09:37:14] 2025-10-14 00:36:54,609 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 09:37:14] 2025-10-14 00:36:54,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 09:37:14] 2025-10-14 00:36:54,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 09:37:14] 2025-10-14 00:37:07,676 | INFO     | [monitor] cgroup control has ended
[2025-10-14 09:37:14] 2025-10-14 00:37:09,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792086558528)>', '<ExcThread(monitor, started 139791446304512)>']
[2025-10-14 09:37:14] 2025-10-14 00:37:09,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 09:37:14] 2025-10-14 00:37:09,686 | INFO     | [monitor] control thread has ended
[2025-10-14 09:37:14] 2025-10-14 00:37:14,066 | INFO     | all workflow threads have been joined
[2025-10-14 09:37:14] 2025-10-14 00:37:14,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 09:37:14] 2025-10-14 00:37:14,067 | INFO     | traces error code: 0
[2025-10-14 09:37:14] 2025-10-14 00:37:14,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 09:37:14] 2025-10-14 00:37:14,101 [wrapper] ==== pilot stdout END ====
[2025-10-14 09:37:14] 2025-10-14 00:37:14,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 09:37:14] 2025-10-14 00:37:14,102 [wrapper] pilotpid: 2863463
[2025-10-14 09:37:14] 2025-10-14 00:37:14,103 [wrapper] Pilot exit status: 0
[2025-10-14 09:37:14] 2025-10-14 00:37:14,105 [wrapper] pandaids: 6842462967
[2025-10-14 09:37:14] 2025-10-14 00:37:14,112 [wrapper] cleanup supervisor_pilot 2896299 2863464
[2025-10-14 09:37:14] 2025-10-14 00:37:14,113 [wrapper] Test setup, not cleaning
[2025-10-14 09:37:14] 2025-10-14 00:37:14,113 [wrapper] apfmon messages muted
[2025-10-14 09:37:14] 2025-10-14 00:37:14,114 [wrapper] ==== wrapper stdout END ====
[2025-10-14 09:37:14] 2025-10-14 00:37:14,114 [wrapper] ==== wrapper stderr END ====
[2025-10-14 09:37:14]  *** Error codes and diagnostics ***
[2025-10-14 09:37:14]     "exeErrorCode": 0,
[2025-10-14 09:37:14]     "exeErrorDiag": "",
[2025-10-14 09:37:14]     "pilotErrorCode": 0,
[2025-10-14 09:37:14]     "pilotErrorDiag": "",
[2025-10-14 09:37:14]  *** Listing of results directory ***
[2025-10-14 09:37:14] total 414628
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc    557409 Oct 13 13:01 pilot3.tar.gz
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc      5112 Oct 13 13:01 queuedata.json
[2025-10-14 09:37:14] -rwx------. 1 boinc boinc     36292 Oct 13 13:02 runpilot2-wrapper.sh
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc       100 Oct 14 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 09:37:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 08:38 run_atlas
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc       105 Oct 14 08:38 job.xml
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc      9628 Oct 14 08:38 init_data.xml
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc 219618259 Oct 14 08:38 EVNT.46676267._004821.pool.root.1
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc     15120 Oct 14 08:38 start_atlas.sh
[2025-10-14 09:37:14] drwxrwx--x. 2 boinc boinc        68 Oct 14 08:38 shared
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc    569680 Oct 14 08:38 input.tar.gz
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc         0 Oct 14 08:38 boinc_lockfile
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc      2549 Oct 14 08:38 pandaJob.out
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc    972799 Oct 14 08:38 agis_schedconf.cvmfs.json
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc   1560580 Oct 14 08:39 agis_ddmendpoints.agis.ALL.json
[2025-10-14 09:37:14] drwx------. 5 boinc boinc      4096 Oct 14 08:39 pilot3
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc 199494041 Oct 14 09:35 HITS.46676269._096255.pool.root.1
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc       529 Oct 14 09:35 boinc_task_state.xml
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc      1024 Oct 14 09:36 memory_monitor_summary.json
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc    262037 Oct 14 09:36 log.46676269._096255.job.log.tgz.1
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc        95 Oct 14 09:36 pilot_heartbeat.json
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc      7789 Oct 14 09:36 heartbeat.json
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc      8192 Oct 14 09:36 boinc_mmap_file
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc        27 Oct 14 09:36 wrapper_checkpoint.txt
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc      4896 Oct 14 09:37 pilotlog.txt
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc    524407 Oct 14 09:37 log.46676269._096255.job.log.1
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc       357 Oct 14 09:37 output.list
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc       620 Oct 14 09:37 runtime_log
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc    808960 Oct 14 09:37 result.tar.gz
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc      8661 Oct 14 09:37 runtime_log.err
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc       641 Oct 14 09:37 ApHNDmEwOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtgVMDmbyr6Vo.diag
[2025-10-14 09:37:14] -rw-r--r--. 1 boinc boinc     21854 Oct 14 09:37 stderr.txt
[2025-10-14 09:37:14] HITS file was successfully produced:
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc 199494041 Oct 14 09:35 shared/HITS.pool.root.1
[2025-10-14 09:37:14]  *** Contents of shared directory: ***
[2025-10-14 09:37:14] total 410660
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc 219618259 Oct 14 08:38 ATLAS.root_0
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc     15120 Oct 14 08:38 start_atlas.sh
[2025-10-14 09:37:14] -rw-r--r--. 2 boinc boinc    569680 Oct 14 08:38 input.tar.gz
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc 199494041 Oct 14 09:35 HITS.pool.root.1
[2025-10-14 09:37:14] -rw-------. 1 boinc boinc    808960 Oct 14 09:37 result.tar.gz
09:37:15 (2856638): run_atlas exited; CPU time 18570.313845
09:37:15 (2856638): called boinc_finish(0)

</stderr_txt>
]]>

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