Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:47:08 (17860): wrapper (7.7.26015): starting
04:47:08 (17860): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 04:47:08] Arguments: --nthreads 12
[2025-10-13 04:47:08] Threads: 12
[2025-10-13 04:47:08] Checking for CVMFS
[2025-10-13 04:47:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:47:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:47:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:47:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:47:08] 2.11.2.0 2945 224101 97092 151654 2 59 16673929 20275201 1 130560 2 111006307 99.984 13458666 12802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:47:08] CVMFS is ok
[2025-10-13 04:47:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:47:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:47:08] Further information can be found at the LHC@home message board.
[2025-10-13 04:47:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:47:08] Checking for apptainer binary...
[2025-10-13 04:47:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:47:08] Running /usr/bin/apptainer --version
[2025-10-13 04:47:08] apptainer version 1.3.2-1.el7
[2025-10-13 04:47:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:47:10] c-205-2.aglt2.org
[2025-10-13 04:47:10] apptainer works
[2025-10-13 04:47:10] Set ATHENA_PROC_NUMBER=12
[2025-10-13 04:47:10] Set ATHENA_CORE_NUMBER=12
[2025-10-13 04:47:10] Starting ATLAS job with PandaID=6841069257
[2025-10-13 04:47:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:04:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:04:49]  replicas=None
[2025-10-13 06:04:49]  scope=mc23_13p6TeV
[2025-10-13 06:04:49]  status=None
[2025-10-13 06:04:49]  status_code=0
[2025-10-13 06:04:49]  storage_token=
[2025-10-13 06:04:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841069257/log.46676269._093389.job.log.tgz.1
[2025-10-13 06:04:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/15/log.46676269._093389.job.log.tgz.1
[2025-10-13 06:04:49]  workdir=None
[2025-10-13 06:04:49] ]
[2025-10-13 06:04:49] 2025-10-13 10:04:10,251 | INFO     | transferring file log.46676269._093389.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841069257/log.46676269._093389.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:04:49] 2025-10-13 10:04:10,251 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841069257/log.46676269._093389.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093389.job
[2025-10-13 06:04:49] 2025-10-13 10:04:10,275 | INFO     | adding to output.list: log.46676269._093389.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/15/log.46676269._093389.job.log.tg
[2025-10-13 06:04:49] 2025-10-13 10:04:10,276 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:04:49] 2025-10-13 10:04:10,276 | INFO     | summary of transferred files:
[2025-10-13 06:04:49] 2025-10-13 10:04:10,276 | INFO     |  -- lfn=log.46676269._093389.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:04:49] 2025-10-13 10:04:10,276 | INFO     | stage-out finished correctly
[2025-10-13 06:04:49] 2025-10-13 10:04:10,433 | INFO     | time since job start (4605s) is within the limit (172800.0s)
[2025-10-13 06:04:49] 2025-10-13 10:04:11,318 | INFO     | monitor loop #345: job 0:6841069257 is in state 'finished'
[2025-10-13 06:04:49] 2025-10-13 10:04:11,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:04:49] 2025-10-13 10:04:12,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:04:49] 2025-10-13 10:04:12,346 | INFO     | job 6841069257 has state=finished
[2025-10-13 06:04:49] 2025-10-13 10:04:12,346 | INFO     | preparing for final server update for job 6841069257 in state='finished'
[2025-10-13 06:04:49] 2025-10-13 10:04:12,347 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:04:49] 2025-10-13 10:04:12,347 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:04:49] 2025-10-13 10:04:12,347 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:04:49] 2025-10-13 10:04:12,347 | INFO     | job 6841069257 has finished - writing final server update
[2025-10-13 06:04:49] 2025-10-13 10:04:12,348 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:04:49] 2025-10-13 10:04:12,349 | INFO     | executing command: lscpu
[2025-10-13 06:04:49] 2025-10-13 10:04:12,375 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:04:49] 2025-10-13 10:04:12,439 | INFO     | time since job start (4607s) is within the limit (172800.0s)
[2025-10-13 06:04:49] 2025-10-13 10:04:13,831 | INFO     | monitor loop #346: job 0:6841069257 is in state 'finished'
[2025-10-13 06:04:49] 2025-10-13 10:04:13,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:04:49] 2025-10-13 10:04:14,445 | INFO     | time since job start (4609s) is within the limit (172800.0s)
[2025-10-13 06:04:49] 2025-10-13 10:04:16,334 | INFO     | monitor loop #347: job 0:6841069257 is in state 'finished'
[2025-10-13 06:04:49] 2025-10-13 10:04:16,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:04:49] 2025-10-13 10:04:16,450 | INFO     | time since job start (4611s) is within the limit (172800.0s)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,146 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:04:49] 2025-10-13 10:04:17,149 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-13 06:04:49] 2025-10-13 10:04:17,151 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069257/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,153 | INFO     | extracted standard info from prmon json
[2025-10-13 06:04:49] 2025-10-13 10:04:17,153 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:04:49] 2025-10-13 10:04:17,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:04:49] 2025-10-13 10:04:17,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:04:49] 2025-10-13 10:04:17,154 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:04:49] 2025-10-13 10:04:17,156 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:04:49] 2025-10-13 10:04:17,156 | INFO     | sum of square deviations: 97479037.0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,157 | INFO     | sum of deviations: -8092315571.0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,157 | INFO     | mean x: 1760347622.5
[2025-10-13 06:04:49] 2025-10-13 10:04:17,157 | INFO     | mean y: 2780016.382352941
[2025-10-13 06:04:49] 2025-10-13 10:04:17,157 | INFO     | -- intersect: 146139723038.59933
[2025-10-13 06:04:49] 2025-10-13 10:04:17,158 | INFO     | intersect: 146139723038.59933
[2025-10-13 06:04:49] 2025-10-13 10:04:17,158 | INFO     | chi2: 0.052273406441374265
[2025-10-13 06:04:49] 2025-10-13 10:04:17,158 | INFO     | -- intersect: 146139723038.59933
[2025-10-13 06:04:49] 2025-10-13 10:04:17,158 | INFO     | current memory leak: -83.02 B/s (using 68 data points, chi2=0.05)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,159 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,159 | INFO     | ..............................
[2025-10-13 06:04:49] 2025-10-13 10:04:17,159 | INFO     | . Timing measurements:
[2025-10-13 06:04:49] 2025-10-13 10:04:17,159 | INFO     | . get job = 0 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,159 | INFO     | . initial setup = 2 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | . payload setup = 7 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | . stage-in = 0 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | . payload execution = 4577 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | . stage-out = 0 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | . log creation = 0 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,160 | INFO     | ..............................
[2025-10-13 06:04:49] 2025-10-13 10:04:17,241 | INFO     | 
[2025-10-13 06:04:49] 2025-10-13 10:04:17,241 | INFO     | job summary report
[2025-10-13 06:04:49] 2025-10-13 10:04:17,241 | INFO     | --------------------------------------------------
[2025-10-13 06:04:49] 2025-10-13 10:04:17,242 | INFO     | PanDA job id: 6841069257
[2025-10-13 06:04:49] 2025-10-13 10:04:17,242 | INFO     | task id: 46676269
[2025-10-13 06:04:49] 2025-10-13 10:04:17,242 | INFO     | errors: (none)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,242 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:04:49] 2025-10-13 10:04:17,242 | INFO     | pilot state: finished 
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | transexitcode: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | exeerrorcode: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | exeerrordiag: 
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | exitcode: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | exitmsg: OK
[2025-10-13 06:04:49] 2025-10-13 10:04:17,243 | INFO     | cpuconsumptiontime: 49783 s
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | nevents: 400
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | neventsw: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | pid: 28666
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | pgrp: 28666
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | corecount: 12
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | event service: False
[2025-10-13 06:04:49] 2025-10-13 10:04:17,244 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4587: 2375336, 4588: 2384389, 4590: 2384389, 4595: 2384711}
[2025-10-13 06:04:49] 2025-10-13 10:04:17,245 | INFO     | --------------------------------------------------
[2025-10-13 06:04:49] 2025-10-13 10:04:17,245 | INFO     | 
[2025-10-13 06:04:49] 2025-10-13 10:04:17,245 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:04:49] 2025-10-13 10:04:17,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:04:49] 2025-10-13 10:04:17,272 | INFO     | job 6841069257 has completed (purged errors)
[2025-10-13 06:04:49] 2025-10-13 10:04:17,273 | INFO     | overall cleanup function is called
[2025-10-13 06:04:49] 2025-10-13 10:04:18,281 | INFO     | --- collectZombieJob: --- 10, [28666]
[2025-10-13 06:04:49] 2025-10-13 10:04:18,281 | INFO     | zombie collector waiting for pid 28666
[2025-10-13 06:04:49] 2025-10-13 10:04:18,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:04:49] 2025-10-13 10:04:18,281 | INFO     | collected zombie processes
[2025-10-13 06:04:49] 2025-10-13 10:04:18,282 | INFO     | will attempt to kill all subprocesses of pid=28666
[2025-10-13 06:04:49] 2025-10-13 10:04:18,372 | INFO     | process IDs to be killed: [28666] (in reverse order)
[2025-10-13 06:04:49] 2025-10-13 10:04:18,424 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:04:49] 2025-10-13 10:04:18,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:04:49] 2025-10-13 10:04:18,428 | INFO     | did not find any defunct processes belonging to 28666
[2025-10-13 06:04:49] 2025-10-13 10:04:18,431 | INFO     | did not find any defunct processes belonging to 28666
[2025-10-13 06:04:49] 2025-10-13 10:04:18,431 | INFO     | ready for new job
[2025-10-13 06:04:49] 2025-10-13 10:04:18,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:04:49] 2025-10-13 10:04:18,432 | INFO     | ***************************************
[2025-10-13 06:04:49] 2025-10-13 10:04:18,432 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:04:49] 2025-10-13 10:04:18,433 | INFO     | ***************************************
[2025-10-13 06:04:49] 2025-10-13 10:04:18,433 | INFO     | 
[2025-10-13 06:04:49] 2025-10-13 10:04:18,433 | INFO     | architecture information:
[2025-10-13 06:04:49] 2025-10-13 10:04:18,434 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:04:49] 2025-10-13 10:04:18,448 | INFO     | cat /etc/os-release:
[2025-10-13 06:04:49] NAME="CentOS Linux"
[2025-10-13 06:04:49] VERSION="7 (Core)"
[2025-10-13 06:04:49] ID="centos"
[2025-10-13 06:04:49] ID_LIKE="rhel fedora"
[2025-10-13 06:04:49] VERSION_ID="7"
[2025-10-13 06:04:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:04:49] ANSI_COLOR="0;31"
[2025-10-13 06:04:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:04:49] HOME_URL="https://www.centos.org/"
[2025-10-13 06:04:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:04:49] 
[2025-10-13 06:04:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:04:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:04:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:04:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:04:49] 
[2025-10-13 06:04:49] 2025-10-13 10:04:18,448 | INFO     | ***************************************
[2025-10-13 06:04:49] 2025-10-13 10:04:18,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:04:49] 2025-10-13 10:04:18,966 | INFO     | sufficient remaining disk space (29416751104 B)
[2025-10-13 06:04:49] 2025-10-13 10:04:18,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:04:49] 2025-10-13 10:04:18,966 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:04:49] 2025-10-13 10:04:18,966 | INFO     | update_server=False
[2025-10-13 06:04:49] 2025-10-13 10:04:18,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:04:49] 2025-10-13 10:04:18,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:04:49] 2025-10-13 10:04:18,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:04:49] 2025-10-13 10:04:18,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:04:49] 2025-10-13 10:04:19,356 | INFO     | all job control threads have been joined
[2025-10-13 06:04:49] 2025-10-13 10:04:19,629 | INFO     | all payload control threads have been joined
[2025-10-13 06:04:49] 2025-10-13 10:04:19,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:04:49] 2025-10-13 10:04:19,845 | INFO     | aborting loop
[2025-10-13 06:04:49] 2025-10-13 10:04:19,956 | INFO     | all data control threads have been joined
[2025-10-13 06:04:49] 2025-10-13 10:04:19,972 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:19,973 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,053 | INFO     | [job] validate thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,100 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,101 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,158 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,361 | INFO     | [job] control thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,621 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,630 | INFO     | [payload] control thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,747 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,850 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,925 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,962 | INFO     | [data] control thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:20,973 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:22,974 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:29,778 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:04:49] 2025-10-13 10:04:30,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:04:49] 2025-10-13 10:04:32,155 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:04:49] 2025-10-13 10:04:33,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239696201536)>', '<ExcThread(monitor, started 140239095965440)>']
[2025-10-13 06:04:49] 2025-10-13 10:04:38,476 | INFO     | all workflow threads have been joined
[2025-10-13 06:04:49] 2025-10-13 10:04:38,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:04:49] 2025-10-13 10:04:38,476 | INFO     | traces error code: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:38,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:04:49] 2025-10-13 10:04:49,655 | INFO     | PID=21563 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:04:49] 2025-10-13 10:04:49,655 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:04:49] 2025-10-13 10:04:49,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:04:49] 2025-10-13 10:04:49,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:04:49] 2025-10-13 10:04:49,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:04:49] 2025-10-13 10:04:49,656 | INFO     | [monitor] control thread has ended
[2025-10-13 06:04:49] 2025-10-13 10:04:49,742 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:04:49] 2025-10-13 10:04:49,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:04:49] 2025-10-13 10:04:49,750 [wrapper] pilotpid: 21563
[2025-10-13 06:04:49] 2025-10-13 10:04:49,754 [wrapper] Pilot exit status: 0
[2025-10-13 06:04:49] 2025-10-13 10:04:49,770 [wrapper] pandaids: 6841069257
[2025-10-13 06:04:49] 2025-10-13 10:04:49,815 [wrapper] cleanup supervisor_pilot 19509 21564
[2025-10-13 06:04:49] 2025-10-13 10:04:49,819 [wrapper] Test setup, not cleaning
[2025-10-13 06:04:49] 2025-10-13 10:04:49,822 [wrapper] apfmon messages muted
[2025-10-13 06:04:49] 2025-10-13 10:04:49,826 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:04:49] 2025-10-13 10:04:49,829 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:04:49]  *** Error codes and diagnostics ***
[2025-10-13 06:04:49]     "exeErrorCode": 0,
[2025-10-13 06:04:49]     "exeErrorDiag": "",
[2025-10-13 06:04:49]     "pilotErrorCode": 0,
[2025-10-13 06:04:49]     "pilotErrorDiag": "",
[2025-10-13 06:04:49]  *** Listing of results directory ***
[2025-10-13 06:04:49] total 426116
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:43 queuedata.json
[2025-10-13 06:04:49] -rwx------ 1 boincer umatlas     36292 Oct 12 20:44 runpilot2-wrapper.sh
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:04:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:47 run_atlas
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:47 job.xml
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas 223337953 Oct 13 04:47 EVNT.46676267._004702.pool.root.1
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:47 start_atlas.sh
[2025-10-13 06:04:49] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:47 shared
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 04:47 input.tar.gz
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:47 boinc_lockfile
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:47 pandaJob.out
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas    972857 Oct 13 04:47 agis_schedconf.cvmfs.json
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas   1560580 Oct 13 04:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:04:49] drwx------ 5 boincer umatlas      4096 Oct 13 04:47 pilot3
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 06:02 init_data.xml
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas 206996373 Oct 13 06:03 HITS.46676269._093389.pool.root.1
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:03 boinc_task_state.xml
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas      1049 Oct 13 06:04 memory_monitor_summary.json
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas    386373 Oct 13 06:04 log.46676269._093389.job.log.tgz.1
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas      7848 Oct 13 06:04 heartbeat.json
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas        95 Oct 13 06:04 pilot_heartbeat.json
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas       745 Oct 13 06:04 pilotlog.txt
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas    669487 Oct 13 06:04 log.46676269._093389.job.log.1
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas       357 Oct 13 06:04 output.list
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:04 runtime_log
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas   1075200 Oct 13 06:04 result.tar.gz
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 06:04 runtime_log.err
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas       658 Oct 13 06:04 DmkLDmuqLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSPVMDmd6ZuIn.diag
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:04 boinc_mmap_file
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:04 wrapper_checkpoint.txt
[2025-10-13 06:04:49] -rw-r--r-- 1 boincer umatlas     21816 Oct 13 06:04 stderr.txt
[2025-10-13 06:04:49] HITS file was successfully produced:
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas 206996373 Oct 13 06:03 shared/HITS.pool.root.1
[2025-10-13 06:04:49]  *** Contents of shared directory: ***
[2025-10-13 06:04:49] total 421884
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas 223337953 Oct 13 04:47 ATLAS.root_0
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:47 start_atlas.sh
[2025-10-13 06:04:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 04:47 input.tar.gz
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas 206996373 Oct 13 06:03 HITS.pool.root.1
[2025-10-13 06:04:49] -rw------- 1 boincer umatlas   1075200 Oct 13 06:04 result.tar.gz
06:04:51 (17860): run_atlas exited; CPU time 49755.525991
06:04:51 (17860): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN