Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:10 (21818): wrapper (7.7.26015): starting
04:53:10 (21818): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:53:10] Arguments: --nthreads 8
[2025-10-13 04:53:10] Threads: 8
[2025-10-13 04:53:10] Checking for CVMFS
[2025-10-13 04:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:53:10] 2.11.2.0 2791 195266 81216 151654 1 59 13949469 20275201 1 130560 1 69235478 99.977 8686453 24232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:53:10] CVMFS is ok
[2025-10-13 04:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:53:10] Further information can be found at the LHC@home message board.
[2025-10-13 04:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:53:10] Checking for apptainer binary...
[2025-10-13 04:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:53:10] Running /usr/bin/apptainer --version
[2025-10-13 04:53:10] apptainer version 1.3.2-1.el7
[2025-10-13 04:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:53:12] c-204-3.aglt2.org
[2025-10-13 04:53:12] apptainer works
[2025-10-13 04:53:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:53:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:53:12] Starting ATLAS job with PandaID=6842427591
[2025-10-13 04:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:05:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:05:48] 2025-10-13 11:04:44,978 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:05:48] 2025-10-13 11:04:44,979 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:05:48] 2025-10-13 11:04:44,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:05:48] 2025-10-13 11:04:44,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:05:48] 2025-10-13 11:04:44,983 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:05:48] 2025-10-13 11:04:44,983 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,984 | INFO     | sum of deviations: 1765248744.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,984 | INFO     | mean x: 1760349546.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,984 | INFO     | mean y: 2475942.4418604653
[2025-10-13 07:05:48] 2025-10-13 11:04:44,984 | INFO     | -- intersect: -4666088602.9186325
[2025-10-13 07:05:48] 2025-10-13 11:04:44,985 | INFO     | intersect: -4666088602.9186325
[2025-10-13 07:05:48] 2025-10-13 11:04:44,985 | INFO     | chi2: 2.2673385234294434
[2025-10-13 07:05:48] 2025-10-13 11:04:44,985 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | sum of deviations: 10058053258.999998
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | mean x: 1760349393.5
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | mean y: 2492381.8870967743
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | -- intersect: -29947559037.87726
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | intersect: -29947559037.87726
[2025-10-13 07:05:48] 2025-10-13 11:04:44,986 | INFO     | chi2: 1.4969128815653665
[2025-10-13 07:05:48] 2025-10-13 11:04:44,987 | INFO     | current chi2=1.4969128815653665 (change=33.97929483854825 %)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,987 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,987 | INFO     | sum of deviations: 9635016245.999996
[2025-10-13 07:05:48] 2025-10-13 11:04:44,987 | INFO     | mean x: 1760349241.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | mean y: 2491441.974789916
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | -- intersect: -32458565008.722954
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | intersect: -32458565008.722954
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | chi2: 1.4993178078311593
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | current chi2=1.4993178078311593 (change=-0.1606590667639858 %)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,988 | INFO     | right removable region: 118
[2025-10-13 07:05:48] 2025-10-13 11:04:44,989 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,989 | INFO     | sum of deviations: -16320109427.500002
[2025-10-13 07:05:48] 2025-10-13 11:04:44,989 | INFO     | mean x: 1760349698.5
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | mean y: 2512286.540322581
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | -- intersect: 48599212724.60795
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | intersect: 48599212724.60795
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | chi2: 0.9035504861047542
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | current chi2=0.9035504861047542 (change=60.14929059917807 %)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,990 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,991 | INFO     | sum of deviations: -15836179317.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,991 | INFO     | mean x: 1760349851.0
[2025-10-13 07:05:48] 2025-10-13 11:04:44,991 | INFO     | mean y: 2511092.277310924
[2025-10-13 07:05:48] 2025-10-13 11:04:44,991 | INFO     | -- intersect: 53355746393.64895
[2025-10-13 07:05:48] 2025-10-13 11:04:44,992 | INFO     | intersect: 53355746393.64895
[2025-10-13 07:05:48] 2025-10-13 11:04:44,992 | INFO     | chi2: 0.8879821951020919
[2025-10-13 07:05:48] 2025-10-13 11:04:44,992 | INFO     | current chi2=0.8879821951020919 (change=1.723012852306451 %)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,992 | INFO     | left removable region: 20
[2025-10-13 07:05:48] 2025-10-13 11:04:44,992 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | sum of deviations: 318032162.0000001
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | mean x: 1760349820.5
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | mean y: 2508035.2040816327
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | -- intersect: -1915977784.0068698
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | intersect: -1915977784.0068698
[2025-10-13 07:05:48] 2025-10-13 11:04:44,993 | INFO     | chi2: 0.013183584967568034
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | -- intersect: -1915977784.0068698
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | current memory leak: 1.09 B/s (using 98 data points, chi2=0.01)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | ..............................
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | . Timing measurements:
[2025-10-13 07:05:48] 2025-10-13 11:04:44,994 | INFO     | . get job = 0 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . initial setup = 2 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . payload setup = 8 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . stage-in = 0 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . payload execution = 7835 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . stage-out = 0 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | . log creation = 0 s
[2025-10-13 07:05:48] 2025-10-13 11:04:44,995 | INFO     | ..............................
[2025-10-13 07:05:48] 2025-10-13 11:04:45,086 | INFO     | 
[2025-10-13 07:05:48] 2025-10-13 11:04:45,087 | INFO     | job summary report
[2025-10-13 07:05:48] 2025-10-13 11:04:45,087 | INFO     | --------------------------------------------------
[2025-10-13 07:05:48] 2025-10-13 11:04:45,087 | INFO     | PanDA job id: 6842427591
[2025-10-13 07:05:48] 2025-10-13 11:04:45,087 | INFO     | task id: 46676269
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | errors: (none)
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | pilot state: finished 
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | transexitcode: 0
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | exeerrorcode: 0
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | exeerrordiag: 
[2025-10-13 07:05:48] 2025-10-13 11:04:45,088 | INFO     | exitcode: 0
[2025-10-13 07:05:48] 2025-10-13 11:04:45,089 | INFO     | exitmsg: OK
[2025-10-13 07:05:48] 2025-10-13 11:04:45,089 | INFO     | cpuconsumptiontime: 58032 s
[2025-10-13 07:05:48] 2025-10-13 11:04:45,089 | INFO     | nevents: 400
[2025-10-13 07:05:48] 2025-10-13 11:04:45,089 | INFO     | neventsw: 0
[2025-10-13 07:05:48] 2025-10-13 11:04:45,089 | INFO     | pid: 490
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | pgrp: 490
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | corecount: 8
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | event service: False
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | sizes: {0: 2348807, 1: 2348807, 6: 2349097, 11: 2349125, 7847: 2376781, 7848: 2376780, 7849: 2385962, 7851: 2386018, 7857: 2386212}
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | --------------------------------------------------
[2025-10-13 07:05:48] 2025-10-13 11:04:45,090 | INFO     | 
[2025-10-13 07:05:48] 2025-10-13 11:04:45,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:05:48] 2025-10-13 11:04:45,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:05:48] 2025-10-13 11:04:45,126 | INFO     | job 6842427591 has completed (purged errors)
[2025-10-13 07:05:48] 2025-10-13 11:04:45,126 | INFO     | overall cleanup function is called
[2025-10-13 07:05:48] 2025-10-13 11:04:46,134 | INFO     | --- collectZombieJob: --- 10, [490]
[2025-10-13 07:05:48] 2025-10-13 11:04:46,134 | INFO     | zombie collector waiting for pid 490
[2025-10-13 07:05:48] 2025-10-13 11:04:46,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:05:48] 2025-10-13 11:04:46,139 | INFO     | collected zombie processes
[2025-10-13 07:05:48] 2025-10-13 11:04:46,139 | INFO     | will attempt to kill all subprocesses of pid=490
[2025-10-13 07:05:48] 2025-10-13 11:04:46,229 | INFO     | process IDs to be killed: [490] (in reverse order)
[2025-10-13 07:05:48] 2025-10-13 11:04:46,285 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:05:48] 2025-10-13 11:04:46,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:05:48] 2025-10-13 11:04:46,289 | INFO     | did not find any defunct processes belonging to 490
[2025-10-13 07:05:48] 2025-10-13 11:04:46,293 | INFO     | did not find any defunct processes belonging to 490
[2025-10-13 07:05:48] 2025-10-13 11:04:46,293 | INFO     | ready for new job
[2025-10-13 07:05:48] 2025-10-13 11:04:46,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:05:48] 2025-10-13 11:04:46,295 | INFO     | ***************************************
[2025-10-13 07:05:48] 2025-10-13 11:04:46,295 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:05:48] 2025-10-13 11:04:46,296 | INFO     | ***************************************
[2025-10-13 07:05:48] 2025-10-13 11:04:46,296 | INFO     | 
[2025-10-13 07:05:48] 2025-10-13 11:04:46,296 | INFO     | architecture information:
[2025-10-13 07:05:48] 2025-10-13 11:04:46,297 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:05:48] 2025-10-13 11:04:46,313 | INFO     | cat /etc/os-release:
[2025-10-13 07:05:48] NAME="CentOS Linux"
[2025-10-13 07:05:48] VERSION="7 (Core)"
[2025-10-13 07:05:48] ID="centos"
[2025-10-13 07:05:48] ID_LIKE="rhel fedora"
[2025-10-13 07:05:48] VERSION_ID="7"
[2025-10-13 07:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:05:48] ANSI_COLOR="0;31"
[2025-10-13 07:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:05:48] HOME_URL="https://www.centos.org/"
[2025-10-13 07:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:05:48] 
[2025-10-13 07:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:05:48] 
[2025-10-13 07:05:48] 2025-10-13 11:04:46,314 | INFO     | ***************************************
[2025-10-13 07:05:48] 2025-10-13 11:04:46,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:05:48] 2025-10-13 11:04:46,837 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-10-13 07:05:48] 2025-10-13 11:04:46,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:05:48] 2025-10-13 11:04:46,838 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:05:48] 2025-10-13 11:04:46,838 | INFO     | update_server=False
[2025-10-13 07:05:48] 2025-10-13 11:04:46,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:05:48] 2025-10-13 11:04:46,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:05:48] 2025-10-13 11:04:46,839 | INFO     | aborting loop
[2025-10-13 07:05:48] 2025-10-13 11:04:46,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:05:48] 2025-10-13 11:04:46,939 | INFO     | all payload control threads have been joined
[2025-10-13 07:05:48] 2025-10-13 11:04:47,304 | INFO     | all data control threads have been joined
[2025-10-13 07:05:48] 2025-10-13 11:04:47,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:05:48] 2025-10-13 11:04:47,829 | INFO     | all job control threads have been joined
[2025-10-13 07:05:48] 2025-10-13 11:04:47,842 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,844 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,844 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,922 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,939 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,942 | INFO     | [payload] control thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:47,945 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,310 | INFO     | [data] control thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,315 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,823 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,835 | INFO     | [job] control thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,870 | INFO     | [job] validate thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:48,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:49,292 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:49,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:05:48] 2025-10-13 11:04:49,410 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:04:53,381 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:05:48] 2025-10-13 11:05:16,498 | INFO     | PID=26447 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:05:48] 2025-10-13 11:05:16,498 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:05:48] 2025-10-13 11:05:16,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:05:48] 2025-10-13 11:05:16,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:05:48] 2025-10-13 11:05:42,906 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:05:48] 2025-10-13 11:05:43,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539019028288)>', '<ExcThread(monitor, started 140537696872192)>']
[2025-10-13 07:05:48] 2025-10-13 11:05:43,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:05:48] 2025-10-13 11:05:43,639 | INFO     | [monitor] control thread has ended
[2025-10-13 07:05:48] 2025-10-13 11:05:48,064 | INFO     | all workflow threads have been joined
[2025-10-13 07:05:48] 2025-10-13 11:05:48,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:05:48] 2025-10-13 11:05:48,069 | INFO     | traces error code: 0
[2025-10-13 07:05:48] 2025-10-13 11:05:48,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:05:48] 2025-10-13 11:05:48,183 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:05:48] 2025-10-13 11:05:48,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:05:48] 2025-10-13 11:05:48,191 [wrapper] pilotpid: 26447
[2025-10-13 07:05:48] 2025-10-13 11:05:48,195 [wrapper] Pilot exit status: 0
[2025-10-13 07:05:48] 2025-10-13 11:05:48,212 [wrapper] pandaids: 6842427591
[2025-10-13 07:05:48] 2025-10-13 11:05:48,264 [wrapper] cleanup supervisor_pilot 15745 26448
[2025-10-13 07:05:48] 2025-10-13 11:05:48,269 [wrapper] Test setup, not cleaning
[2025-10-13 07:05:48] 2025-10-13 11:05:48,274 [wrapper] apfmon messages muted
[2025-10-13 07:05:48] 2025-10-13 11:05:48,278 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:05:48] 2025-10-13 11:05:48,282 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:05:48]  *** Error codes and diagnostics ***
[2025-10-13 07:05:48]     "exeErrorCode": 0,
[2025-10-13 07:05:48]     "exeErrorDiag": "",
[2025-10-13 07:05:48]     "pilotErrorCode": 0,
[2025-10-13 07:05:48]     "pilotErrorDiag": "",
[2025-10-13 07:05:48]  *** Listing of results directory ***
[2025-10-13 07:05:48] total 420816
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 07:05:48] -rwx------ 1 boincer umatlas     36292 Oct 12 23:55 runpilot2-wrapper.sh
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:55 queuedata.json
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:05:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:53 run_atlas
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:53 job.xml
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas 221681259 Oct 13 04:53 EVNT.46676267._004574.pool.root.1
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:53 start_atlas.sh
[2025-10-13 07:05:48] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:53 shared
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:53 input.tar.gz
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:53 boinc_lockfile
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:53 pandaJob.out
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas    972857 Oct 13 04:53 agis_schedconf.cvmfs.json
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas   1560580 Oct 13 04:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:05:48] drwx------ 5 boincer umatlas      4096 Oct 13 04:53 pilot3
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 07:03 init_data.xml
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas 202356871 Oct 13 07:04 HITS.46676269._096192.pool.root.1
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas       530 Oct 13 07:04 boinc_task_state.xml
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas        95 Oct 13 07:04 pilot_heartbeat.json
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas      1051 Oct 13 07:04 memory_monitor_summary.json
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas    385741 Oct 13 07:04 log.46676269._096192.job.log.tgz.1
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas      7843 Oct 13 07:04 heartbeat.json
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:05 boinc_mmap_file
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:05 wrapper_checkpoint.txt
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas      4746 Oct 13 07:05 pilotlog.txt
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas   1102103 Oct 13 07:05 log.46676269._096192.job.log.1
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas       357 Oct 13 07:05 output.list
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:05 runtime_log
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas   1505280 Oct 13 07:05 result.tar.gz
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 07:05 runtime_log.err
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas       659 Oct 13 07:05 0yVNDm2pOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHgmNDmQVJEEn.diag
[2025-10-13 07:05:48] -rw-r--r-- 1 boincer umatlas     20873 Oct 13 07:05 stderr.txt
[2025-10-13 07:05:48] HITS file was successfully produced:
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas 202356871 Oct 13 07:04 shared/HITS.pool.root.1
[2025-10-13 07:05:48]  *** Contents of shared directory: ***
[2025-10-13 07:05:48] total 416156
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas 221681259 Oct 13 04:53 ATLAS.root_0
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:53 start_atlas.sh
[2025-10-13 07:05:48] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:53 input.tar.gz
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas 202356871 Oct 13 07:04 HITS.pool.root.1
[2025-10-13 07:05:48] -rw------- 1 boincer umatlas   1505280 Oct 13 07:05 result.tar.gz
07:05:50 (21818): run_atlas exited; CPU time 57977.811381
07:05:50 (21818): called boinc_finish(0)

</stderr_txt>
]]>

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