Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:35:13 (2006894): wrapper (7.7.26015): starting
05:35:13 (2006894): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:35:13] Arguments: --nthreads 8
[2025-10-13 05:35:13] Threads: 8
[2025-10-13 05:35:13] Checking for CVMFS
[2025-10-13 05:35:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:35:15] 2.13.2.0 2059728 130510 396360 151656 0 110 30405818 32935936 38619 16776704 0 307688172 99.637 289598778 20208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:35:15] CVMFS is ok
[2025-10-13 05:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:35:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:35:15] Further information can be found at the LHC@home message board.
[2025-10-13 05:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:35:15] Checking for apptainer binary...
[2025-10-13 05:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:35:15] Running /usr/bin/apptainer --version
[2025-10-13 05:35:15] apptainer version 1.4.3-1.el9
[2025-10-13 05:35:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:35:16] c6-12-29-1.aglt2.org
[2025-10-13 05:35:16] apptainer works
[2025-10-13 05:35:16] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:35:16] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:35:16] Starting ATLAS job with PandaID=6842427589
[2025-10-13 05:35:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:03:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:03:39] 2025-10-13 15:02:30,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:03:39] 2025-10-13 15:02:30,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:03:39] 2025-10-13 15:02:30,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:03:39] 2025-10-13 15:02:30,530 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:03:39] 2025-10-13 15:02:30,548 | INFO     | sum of square deviations: 9971399855.97798
[2025-10-13 11:03:39] 2025-10-13 15:02:30,550 | INFO     | sum of deviations: 108867787728.49683
[2025-10-13 11:03:39] 2025-10-13 15:02:30,551 | INFO     | mean x: 1760358013.9025156
[2025-10-13 11:03:39] 2025-10-13 15:02:30,551 | INFO     | mean y: 2088363.6289308176
[2025-10-13 11:03:39] 2025-10-13 15:02:30,551 | INFO     | -- intersect: -19217508217.768112
[2025-10-13 11:03:39] 2025-10-13 15:02:30,551 | INFO     | intersect: -19217508217.768112
[2025-10-13 11:03:39] 2025-10-13 15:02:30,563 | INFO     | chi2: 3.517969552981353
[2025-10-13 11:03:39] 2025-10-13 15:02:30,564 | INFO     | sum of square deviations: 9508444167.654934
[2025-10-13 11:03:39] 2025-10-13 15:02:30,567 | INFO     | sum of deviations: 131347442631.23643
[2025-10-13 11:03:39] 2025-10-13 15:02:30,567 | INFO     | mean x: 1760357861.4089458
[2025-10-13 11:03:39] 2025-10-13 15:02:30,567 | INFO     | mean y: 2095704.2012779552
[2025-10-13 11:03:39] 2025-10-13 15:02:30,586 | INFO     | -- intersect: -24315079549.180153
[2025-10-13 11:03:39] 2025-10-13 15:02:30,586 | INFO     | intersect: -24315079549.180153
[2025-10-13 11:03:39] 2025-10-13 15:02:30,586 | INFO     | chi2: 2.8018648885450683
[2025-10-13 11:03:39] 2025-10-13 15:02:30,586 | INFO     | current chi2=2.8018648885450683 (change=20.35562427848222 %)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,587 | INFO     | right removable region: 312
[2025-10-13 11:03:39] 2025-10-13 15:02:30,587 | INFO     | sum of square deviations: 9508366087.654936
[2025-10-13 11:03:39] 2025-10-13 15:02:30,602 | INFO     | sum of deviations: 45160110687.89458
[2025-10-13 11:03:39] 2025-10-13 15:02:30,603 | INFO     | mean x: 1760358166.4089458
[2025-10-13 11:03:39] 2025-10-13 15:02:30,603 | INFO     | mean y: 2109287.680511182
[2025-10-13 11:03:39] 2025-10-13 15:02:30,603 | INFO     | -- intersect: -8358735142.63463
[2025-10-13 11:03:39] 2025-10-13 15:02:30,603 | INFO     | intersect: -8358735142.63463
[2025-10-13 11:03:39] 2025-10-13 15:02:30,604 | INFO     | chi2: 1.2974309716811634
[2025-10-13 11:03:39] 2025-10-13 15:02:30,604 | INFO     | current chi2=1.2974309716811634 (change=63.11989196775063 %)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,605 | INFO     | sum of square deviations: 9059948254.26949
[2025-10-13 11:03:39] 2025-10-13 15:02:30,627 | INFO     | sum of deviations: 17511466333.373375
[2025-10-13 11:03:39] 2025-10-13 15:02:30,627 | INFO     | mean x: 1760358318.9058442
[2025-10-13 11:03:39] 2025-10-13 15:02:30,627 | INFO     | mean y: 2118676.737012987
[2025-10-13 11:03:39] 2025-10-13 15:02:30,627 | INFO     | -- intersect: -3400379281.4236765
[2025-10-13 11:03:39] 2025-10-13 15:02:30,627 | INFO     | intersect: -3400379281.4236765
[2025-10-13 11:03:39] 2025-10-13 15:02:30,628 | INFO     | chi2: 0.9269751552405513
[2025-10-13 11:03:39] 2025-10-13 15:02:30,628 | INFO     | current chi2=0.9269751552405513 (change=28.55302706089936 %)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,649 | INFO     | sum of square deviations: 8625837361.069239
[2025-10-13 11:03:39] 2025-10-13 15:02:30,652 | INFO     | sum of deviations: 3899283039.8613796
[2025-10-13 11:03:39] 2025-10-13 15:02:30,652 | INFO     | mean x: 1760358471.4059405
[2025-10-13 11:03:39] 2025-10-13 15:02:30,652 | INFO     | mean y: 2123466.1881188117
[2025-10-13 11:03:39] 2025-10-13 15:02:30,659 | INFO     | -- intersect: -793641123.8804592
[2025-10-13 11:03:39] 2025-10-13 15:02:30,660 | INFO     | intersect: -793641123.8804592
[2025-10-13 11:03:39] 2025-10-13 15:02:30,660 | INFO     | chi2: 0.8385255403370468
[2025-10-13 11:03:39] 2025-10-13 15:02:30,660 | INFO     | current chi2=0.8385255403370468 (change=9.541746011580175 %)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,661 | INFO     | left removable region: 30
[2025-10-13 11:03:39] 2025-10-13 15:02:30,661 | INFO     | sum of square deviations: 6953842207.602846
[2025-10-13 11:03:39] 2025-10-13 15:02:30,682 | INFO     | sum of deviations: 31506372582.801437
[2025-10-13 11:03:39] 2025-10-13 15:02:30,682 | INFO     | mean x: 1760358745.9078014
[2025-10-13 11:03:39] 2025-10-13 15:02:30,682 | INFO     | mean y: 2130053.9539007093
[2025-10-13 11:03:39] 2025-10-13 15:02:30,682 | INFO     | -- intersect: -7973679127.814048
[2025-10-13 11:03:39] 2025-10-13 15:02:30,682 | INFO     | intersect: -7973679127.814048
[2025-10-13 11:03:39] 2025-10-13 15:02:30,683 | INFO     | chi2: 0.0966050331093785
[2025-10-13 11:03:39] 2025-10-13 15:02:30,683 | INFO     | -- intersect: -7973679127.814048
[2025-10-13 11:03:39] 2025-10-13 15:02:30,683 | INFO     | current memory leak: 4.53 B/s (using 282 data points, chi2=0.10)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,684 | INFO     | could have reported an average CPU frequency of 2543 MHz (14 samples)
[2025-10-13 11:03:39] 2025-10-13 15:02:30,684 | INFO     | ..............................
[2025-10-13 11:03:39] 2025-10-13 15:02:30,684 | INFO     | . Timing measurements:
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . get job = 0 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . initial setup = 7 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . payload setup = 46 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . stage-in = 0 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . payload execution = 19406 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . stage-out = 4 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | . log creation = 0 s
[2025-10-13 11:03:39] 2025-10-13 15:02:30,685 | INFO     | ..............................
[2025-10-13 11:03:39] 2025-10-13 15:02:31,029 | INFO     | 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | job summary report
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | --------------------------------------------------
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | PanDA job id: 6842427589
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | task id: 46676269
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | errors: (none)
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | pilot state: finished 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | transexitcode: 0
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | exeerrorcode: 0
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | exeerrordiag: 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | exitcode: 0
[2025-10-13 11:03:39] 2025-10-13 15:02:31,030 | INFO     | exitmsg: OK
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | cpuconsumptiontime: 46487 s
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | nevents: 400
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | neventsw: 0
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | pid: 2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | pgrp: 2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | corecount: 8
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | event service: False
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | sizes: {0: 2348636, 1: 2348636, 2: 2348664, 3: 2348891, 15: 2348891, 26: 2348919, 36: 2349337, 38: 2349365, 19456: 2382371, 19461: 2391369, 19464: 2391425, 19485: 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | --------------------------------------------------
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | 
[2025-10-13 11:03:39] 2025-10-13 15:02:31,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:03:39] 2025-10-13 15:02:31,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | job 6842427589 has completed (purged errors)
[2025-10-13 11:03:39] 2025-10-13 15:02:31,057 | INFO     | overall cleanup function is called
[2025-10-13 11:03:39] 2025-10-13 15:02:32,066 | INFO     | --- collectZombieJob: --- 10, [2040153]
[2025-10-13 11:03:39] 2025-10-13 15:02:32,067 | INFO     | zombie collector waiting for pid 2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:32,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:03:39] 2025-10-13 15:02:32,067 | INFO     | collected zombie processes
[2025-10-13 11:03:39] 2025-10-13 15:02:32,067 | INFO     | will attempt to kill all subprocesses of pid=2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:33,327 | INFO     | process IDs to be killed: [2040153] (in reverse order)
[2025-10-13 11:03:39] 2025-10-13 15:02:33,509 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:03:39] 2025-10-13 15:02:33,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:03:39] 2025-10-13 15:02:33,584 | INFO     | did not find any defunct processes belonging to 2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:33,632 | INFO     | did not find any defunct processes belonging to 2040153
[2025-10-13 11:03:39] 2025-10-13 15:02:33,632 | INFO     | ready for new job
[2025-10-13 11:03:39] 2025-10-13 15:02:33,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:03:39] 2025-10-13 15:02:33,642 | INFO     | ***************************************
[2025-10-13 11:03:39] 2025-10-13 15:02:33,642 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:03:39] 2025-10-13 15:02:33,642 | INFO     | ***************************************
[2025-10-13 11:03:39] 2025-10-13 15:02:33,642 | INFO     | 
[2025-10-13 11:03:39] 2025-10-13 15:02:33,663 | INFO     | architecture information:
[2025-10-13 11:03:39] 2025-10-13 15:02:33,666 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:03:39] 2025-10-13 15:02:33,783 | INFO     | cat /etc/os-release:
[2025-10-13 11:03:39] NAME="CentOS Linux"
[2025-10-13 11:03:39] VERSION="7 (Core)"
[2025-10-13 11:03:39] ID="centos"
[2025-10-13 11:03:39] ID_LIKE="rhel fedora"
[2025-10-13 11:03:39] VERSION_ID="7"
[2025-10-13 11:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:03:39] ANSI_COLOR="0;31"
[2025-10-13 11:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:03:39] HOME_URL="https://www.centos.org/"
[2025-10-13 11:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:03:39] 
[2025-10-13 11:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:03:39] 
[2025-10-13 11:03:39] 2025-10-13 15:02:33,783 | INFO     | ***************************************
[2025-10-13 11:03:39] 2025-10-13 15:02:34,287 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:03:39] 2025-10-13 15:02:34,375 | INFO     | sufficient remaining disk space (95493816320 B)
[2025-10-13 11:03:39] 2025-10-13 15:02:34,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:03:39] 2025-10-13 15:02:34,375 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:03:39] 2025-10-13 15:02:34,375 | INFO     | update_server=False
[2025-10-13 11:03:39] 2025-10-13 15:02:34,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:03:39] 2025-10-13 15:02:34,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:39] 2025-10-13 15:02:34,429 | INFO     | aborting loop
[2025-10-13 11:03:39] 2025-10-13 15:02:34,761 | INFO     | all job control threads have been joined
[2025-10-13 11:03:39] 2025-10-13 15:02:34,962 | INFO     | all data control threads have been joined
[2025-10-13 11:03:39] 2025-10-13 15:02:34,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:03:39] 2025-10-13 15:02:35,381 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,435 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,576 | INFO     | all payload control threads have been joined
[2025-10-13 11:03:39] 2025-10-13 15:02:35,768 | INFO     | [job] control thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,784 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,789 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,823 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:35,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:39] 2025-10-13 15:02:35,968 | INFO     | [data] control thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,229 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,250 | INFO     | [job] validate thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,320 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,430 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,582 | INFO     | [payload] control thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,955 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:36,990 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:02:37,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:03:39] 2025-10-13 15:02:41,701 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:03:39] 2025-10-13 15:03:03,523 | INFO     | PID=2024534 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:03:39] 2025-10-13 15:03:03,523 | INFO     | .. there are 46 such processes running
[2025-10-13 11:03:39] 2025-10-13 15:03:03,523 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:03:39] 2025-10-13 15:03:03,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:03:39] 2025-10-13 15:03:03,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:03:39] 2025-10-13 15:03:11,258 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:03:39] 2025-10-13 15:03:12,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450619643712)>', '<ExcThread(monitor, started 140450346276608)>']
[2025-10-13 11:03:39] 2025-10-13 15:03:12,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:03:39] 2025-10-13 15:03:12,577 | INFO     | [monitor] control thread has ended
[2025-10-13 11:03:39] 2025-10-13 15:03:17,523 | INFO     | all workflow threads have been joined
[2025-10-13 11:03:39] 2025-10-13 15:03:17,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:03:39] 2025-10-13 15:03:17,524 | INFO     | traces error code: 0
[2025-10-13 11:03:39] 2025-10-13 15:03:17,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:03:39] 2025-10-13 15:03:18,452 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:03:39] 2025-10-13 15:03:18,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:03:39] 2025-10-13 15:03:18,528 [wrapper] pilotpid: 2024534
[2025-10-13 11:03:39] 2025-10-13 15:03:18,560 [wrapper] Pilot exit status: 0
[2025-10-13 11:03:39] 2025-10-13 15:03:18,639 [wrapper] pandaids: 6842427589
[2025-10-13 11:03:39] 2025-10-13 15:03:18,760 [wrapper] cleanup supervisor_pilot 3021850 2024536
[2025-10-13 11:03:39] 2025-10-13 15:03:18,769 [wrapper] Test setup, not cleaning
[2025-10-13 11:03:39] 2025-10-13 15:03:18,794 [wrapper] apfmon messages muted
[2025-10-13 11:03:39] 2025-10-13 15:03:18,844 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:03:39] 2025-10-13 15:03:18,884 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:03:39]  *** Error codes and diagnostics ***
[2025-10-13 11:03:39]     "exeErrorCode": 0,
[2025-10-13 11:03:39]     "exeErrorDiag": "",
[2025-10-13 11:03:39]     "pilotErrorCode": 0,
[2025-10-13 11:03:39]     "pilotErrorDiag": "",
[2025-10-13 11:03:39]  *** Listing of results directory ***
[2025-10-13 11:03:39] total 407696
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 11:03:39] -rwx------. 1 boincer umatlas     36292 Oct 12 23:55 runpilot2-wrapper.sh
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:55 queuedata.json
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:03:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:35 run_atlas
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:35 job.xml
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas 219509596 Oct 13 05:35 EVNT.46676267._003761.pool.root.1
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:35 start_atlas.sh
[2025-10-13 11:03:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:35 shared
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 05:35 input.tar.gz
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:35 boinc_lockfile
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:35 pandaJob.out
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas    972849 Oct 13 05:36 agis_schedconf.cvmfs.json
[2025-10-13 11:03:39] drwx------. 5 boincer umatlas      4096 Oct 13 05:36 pilot3
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas 188477008 Oct 13 11:00 HITS.46676269._096190.pool.root.1
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas       531 Oct 13 11:01 boinc_task_state.xml
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas      1050 Oct 13 11:01 memory_monitor_summary.json
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas    514282 Oct 13 11:02 log.46676269._096190.job.log.tgz.1
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas      6862 Oct 13 11:02 init_data.xml
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas        95 Oct 13 11:02 pilot_heartbeat.json
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas      7839 Oct 13 11:02 heartbeat.json
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas      4824 Oct 13 11:03 pilotlog.txt
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas   2281006 Oct 13 11:03 log.46676269._096190.job.log.1
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas       357 Oct 13 11:03 output.list
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:03 runtime_log
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas   2816000 Oct 13 11:03 result.tar.gz
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 11:03 runtime_log.err
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas       658 Oct 13 11:03 gzSNDm2pOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFgmNDmGUFn6m.diag
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:03 wrapper_checkpoint.txt
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:03 boinc_mmap_file
[2025-10-13 11:03:39] -rw-r--r--. 1 boincer umatlas     21035 Oct 13 11:03 stderr.txt
[2025-10-13 11:03:39] HITS file was successfully produced:
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas 188477008 Oct 13 11:00 shared/HITS.pool.root.1
[2025-10-13 11:03:39]  *** Contents of shared directory: ***
[2025-10-13 11:03:39] total 401764
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas 219509596 Oct 13 05:35 ATLAS.root_0
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:35 start_atlas.sh
[2025-10-13 11:03:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 05:35 input.tar.gz
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas 188477008 Oct 13 11:00 HITS.pool.root.1
[2025-10-13 11:03:39] -rw-------. 1 boincer umatlas   2816000 Oct 13 11:03 result.tar.gz
11:03:41 (2006894): run_atlas exited; CPU time 47517.569250
11:03:41 (2006894): called boinc_finish(0)

</stderr_txt>
]]>

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