Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:59:42 (27264): wrapper (7.7.26015): starting
04:59:42 (27264): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:59:42] Arguments: --nthreads 8
[2025-10-13 04:59:42] Threads: 8
[2025-10-13 04:59:42] Checking for CVMFS
[2025-10-13 04:59:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:59:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:59:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:59:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:59:43] 2.11.2.0 2756 9732 78636 151654 2 59 15725969 20275201 1 130560 0 6684331 99.990 324091 38869 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:59:43] CVMFS is ok
[2025-10-13 04:59:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:59:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:59:43] Further information can be found at the LHC@home message board.
[2025-10-13 04:59:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:59:43] Checking for apptainer binary...
[2025-10-13 04:59:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:59:43] Running /usr/bin/apptainer --version
[2025-10-13 04:59:43] apptainer version 1.3.2-1.el7
[2025-10-13 04:59:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:59:45] c-115-14.aglt2.org
[2025-10-13 04:59:45] apptainer works
[2025-10-13 04:59:45] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:59:45] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:59:45] Starting ATLAS job with PandaID=6840750200
[2025-10-13 04:59:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:47:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:47:32] 2025-10-13 10:46:58,989 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750200/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:47:32] 2025-10-13 10:46:59,084 | INFO     | number of running child processes to parent process 5211: 1
[2025-10-13 06:47:32] 2025-10-13 10:46:59,085 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:47:32] 2025-10-13 10:47:00,195 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:47:32] 2025-10-13 10:47:00,198 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-10-13 06:47:32] 2025-10-13 10:47:00,200 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750200/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,201 | INFO     | extracted standard info from prmon json
[2025-10-13 06:47:32] 2025-10-13 10:47:00,201 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:47:32] 2025-10-13 10:47:00,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:47:32] 2025-10-13 10:47:00,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:47:32] 2025-10-13 10:47:00,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:47:32] 2025-10-13 10:47:00,205 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:47:32] 2025-10-13 10:47:00,205 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,205 | INFO     | sum of deviations: 7222367120.999997
[2025-10-13 06:47:32] 2025-10-13 10:47:00,206 | INFO     | mean x: 1760349204.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,206 | INFO     | mean y: 2516238.8476190474
[2025-10-13 06:47:32] 2025-10-13 10:47:00,206 | INFO     | -- intersect: -35419351812.358345
[2025-10-13 06:47:32] 2025-10-13 10:47:00,206 | INFO     | intersect: -35419351812.358345
[2025-10-13 06:47:32] 2025-10-13 10:47:00,206 | INFO     | chi2: 1.4360757692987378
[2025-10-13 06:47:32] 2025-10-13 10:47:00,207 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,207 | INFO     | sum of deviations: 6850421420.5
[2025-10-13 06:47:32] 2025-10-13 10:47:00,207 | INFO     | mean x: 1760349051.5
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | mean y: 2515077.43
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | -- intersect: -38891348563.01346
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | intersect: -38891348563.01346
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | chi2: 1.438996307774192
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | current chi2=1.438996307774192 (change=-0.20336938606522217 %)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,208 | INFO     | right removable region: 99
[2025-10-13 06:47:32] 2025-10-13 10:47:00,209 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,209 | INFO     | sum of deviations: -7313036972.000001
[2025-10-13 06:47:32] 2025-10-13 10:47:00,209 | INFO     | mean x: 1760349356.5
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | mean y: 2560531.82
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | -- intersect: 41522971409.95455
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | intersect: 41522971409.95455
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | chi2: 0.07827420455195182
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | current chi2=0.07827420455195182 (change=94.54943769504763 %)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,210 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | sum of deviations: -4440032925.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | mean x: 1760349509.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | mean y: 2550584.1157894735
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | -- intersect: 29405031597.67396
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | intersect: 29405031597.67396
[2025-10-13 06:47:32] 2025-10-13 10:47:00,211 | INFO     | chi2: 0.065592764554321
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | current chi2=0.065592764554321 (change=16.201301655149933 %)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | left removable region: 20
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | sum of square deviations: 152858680.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | sum of deviations: 800821907.9999999
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | mean x: 1760349631.0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,212 | INFO     | mean y: 2528426.0379746836
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | -- intersect: -9219888974.42967
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | intersect: -9219888974.42967
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | chi2: 0.0003008547976594548
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | -- intersect: -9219888974.42967
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | current memory leak: 5.24 B/s (using 79 data points, chi2=0.00)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,213 | INFO     | could have reported an average CPU frequency of 2076 MHz (7 samples)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | ..............................
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . Timing measurements:
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . get job = 0 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . initial setup = 2 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . payload setup = 8 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . stage-in = 0 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . payload execution = 6382 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . stage-out = 0 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,214 | INFO     | . log creation = 0 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,215 | INFO     | ..............................
[2025-10-13 06:47:32] 2025-10-13 10:47:00,318 | INFO     | 
[2025-10-13 06:47:32] 2025-10-13 10:47:00,318 | INFO     | job summary report
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | --------------------------------------------------
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | PanDA job id: 6840750200
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | task id: 46676269
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | errors: (none)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:47:32] 2025-10-13 10:47:00,319 | INFO     | pilot state: finished 
[2025-10-13 06:47:32] 2025-10-13 10:47:00,320 | INFO     | transexitcode: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,320 | INFO     | exeerrorcode: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,320 | INFO     | exeerrordiag: 
[2025-10-13 06:47:32] 2025-10-13 10:47:00,320 | INFO     | exitcode: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,320 | INFO     | exitmsg: OK
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | cpuconsumptiontime: 47677 s
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | nevents: 400
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | neventsw: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | pid: 5211
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | pgrp: 5211
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | corecount: 8
[2025-10-13 06:47:32] 2025-10-13 10:47:00,321 | INFO     | event service: False
[2025-10-13 06:47:32] 2025-10-13 10:47:00,322 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 6393: 2376201, 6394: 2376200, 6396: 2385438, 6401: 2385576}
[2025-10-13 06:47:32] 2025-10-13 10:47:00,322 | INFO     | --------------------------------------------------
[2025-10-13 06:47:32] 2025-10-13 10:47:00,322 | INFO     | 
[2025-10-13 06:47:32] 2025-10-13 10:47:00,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:47:32] 2025-10-13 10:47:00,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:47:32] 2025-10-13 10:47:00,355 | INFO     | job 6840750200 has completed (purged errors)
[2025-10-13 06:47:32] 2025-10-13 10:47:00,355 | INFO     | overall cleanup function is called
[2025-10-13 06:47:32] 2025-10-13 10:47:01,363 | INFO     | --- collectZombieJob: --- 10, [5211]
[2025-10-13 06:47:32] 2025-10-13 10:47:01,364 | INFO     | zombie collector waiting for pid 5211
[2025-10-13 06:47:32] 2025-10-13 10:47:01,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:47:32] 2025-10-13 10:47:01,364 | INFO     | collected zombie processes
[2025-10-13 06:47:32] 2025-10-13 10:47:01,364 | INFO     | will attempt to kill all subprocesses of pid=5211
[2025-10-13 06:47:32] 2025-10-13 10:47:01,447 | INFO     | process IDs to be killed: [5211] (in reverse order)
[2025-10-13 06:47:32] 2025-10-13 10:47:01,506 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:47:32] 2025-10-13 10:47:01,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:47:32] 2025-10-13 10:47:01,511 | INFO     | did not find any defunct processes belonging to 5211
[2025-10-13 06:47:32] 2025-10-13 10:47:01,514 | INFO     | did not find any defunct processes belonging to 5211
[2025-10-13 06:47:32] 2025-10-13 10:47:01,514 | INFO     | ready for new job
[2025-10-13 06:47:32] 2025-10-13 10:47:01,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:47:32] 2025-10-13 10:47:01,516 | INFO     | ***************************************
[2025-10-13 06:47:32] 2025-10-13 10:47:01,516 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:47:32] 2025-10-13 10:47:01,516 | INFO     | ***************************************
[2025-10-13 06:47:32] 2025-10-13 10:47:01,516 | INFO     | 
[2025-10-13 06:47:32] 2025-10-13 10:47:01,517 | INFO     | architecture information:
[2025-10-13 06:47:32] 2025-10-13 10:47:01,517 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:47:32] 2025-10-13 10:47:01,537 | INFO     | cat /etc/os-release:
[2025-10-13 06:47:32] NAME="CentOS Linux"
[2025-10-13 06:47:32] VERSION="7 (Core)"
[2025-10-13 06:47:32] ID="centos"
[2025-10-13 06:47:32] ID_LIKE="rhel fedora"
[2025-10-13 06:47:32] VERSION_ID="7"
[2025-10-13 06:47:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:47:32] ANSI_COLOR="0;31"
[2025-10-13 06:47:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:47:32] HOME_URL="https://www.centos.org/"
[2025-10-13 06:47:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:47:32] 
[2025-10-13 06:47:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:47:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:47:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:47:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:47:32] 
[2025-10-13 06:47:32] 2025-10-13 10:47:01,537 | INFO     | ***************************************
[2025-10-13 06:47:32] 2025-10-13 10:47:02,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:47:32] 2025-10-13 10:47:02,064 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-13 06:47:32] 2025-10-13 10:47:02,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:47:32] 2025-10-13 10:47:02,065 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:47:32] 2025-10-13 10:47:02,065 | INFO     | update_server=False
[2025-10-13 06:47:32] 2025-10-13 10:47:02,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:47:32] 2025-10-13 10:47:02,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:47:32] 2025-10-13 10:47:02,101 | INFO     | all data control threads have been joined
[2025-10-13 06:47:32] 2025-10-13 10:47:02,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:47:32] 2025-10-13 10:47:02,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:47:32] 2025-10-13 10:47:02,590 | INFO     | aborting loop
[2025-10-13 06:47:32] 2025-10-13 10:47:03,058 | INFO     | all payload control threads have been joined
[2025-10-13 06:47:32] 2025-10-13 10:47:03,067 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,070 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,071 | INFO     | [job] validate thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,097 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,107 | INFO     | [data] control thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,204 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,213 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,578 | INFO     | all job control threads have been joined
[2025-10-13 06:47:32] 2025-10-13 10:47:03,596 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:03,829 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:04,064 | INFO     | [payload] control thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:04,147 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:04,503 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:04,583 | INFO     | [job] control thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:05,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:47:32] 2025-10-13 10:47:09,083 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:47:32] 2025-10-13 10:47:11,904 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:47:32] 2025-10-13 10:47:12,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952170661696)>', '<ExcThread(monitor, started 139951366727424)>']
[2025-10-13 06:47:32] 2025-10-13 10:47:17,433 | INFO     | all workflow threads have been joined
[2025-10-13 06:47:32] 2025-10-13 10:47:17,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:47:32] 2025-10-13 10:47:17,434 | INFO     | traces error code: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:17,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:47:32] 2025-10-13 10:47:32,000 | INFO     | PID=30932 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 06:47:32] 2025-10-13 10:47:32,001 | INFO     | [monitor] control thread has ended
[2025-10-13 06:47:32] 2025-10-13 10:47:32,108 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:47:32] 2025-10-13 10:47:32,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:47:32] 2025-10-13 10:47:32,117 [wrapper] pilotpid: 30932
[2025-10-13 06:47:32] 2025-10-13 10:47:32,122 [wrapper] Pilot exit status: 0
[2025-10-13 06:47:32] 2025-10-13 10:47:32,143 [wrapper] pandaids: 6840750200
[2025-10-13 06:47:32] 2025-10-13 10:47:32,182 [wrapper] cleanup supervisor_pilot 10242 30933
[2025-10-13 06:47:32] 2025-10-13 10:47:32,187 [wrapper] Test setup, not cleaning
[2025-10-13 06:47:32] 2025-10-13 10:47:32,191 [wrapper] apfmon messages muted
[2025-10-13 06:47:32] 2025-10-13 10:47:32,196 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:47:32] 2025-10-13 10:47:32,201 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:47:32]  *** Error codes and diagnostics ***
[2025-10-13 06:47:32]     "exeErrorCode": 0,
[2025-10-13 06:47:32]     "exeErrorDiag": "",
[2025-10-13 06:47:32]     "pilotErrorCode": 0,
[2025-10-13 06:47:32]     "pilotErrorDiag": "",
[2025-10-13 06:47:32]  *** Listing of results directory ***
[2025-10-13 06:47:32] total 408360
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:10 queuedata.json
[2025-10-13 06:47:32] -rwx------ 1 boincer umatlas     36292 Oct 12 17:11 runpilot2-wrapper.sh
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:47:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:59 run_atlas
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:59 job.xml
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas 220019635 Oct 13 04:59 EVNT.46676267._004773.pool.root.1
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:59 start_atlas.sh
[2025-10-13 06:47:32] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:59 shared
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 04:59 input.tar.gz
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:59 boinc_lockfile
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:59 pandaJob.out
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas    972857 Oct 13 04:59 agis_schedconf.cvmfs.json
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas   1560580 Oct 13 05:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:47:32] drwx------ 5 boincer umatlas      4096 Oct 13 05:00 pilot3
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 06:46 init_data.xml
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas 191722928 Oct 13 06:46 HITS.46676269._089579.pool.root.1
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:46 boinc_task_state.xml
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas      1049 Oct 13 06:46 memory_monitor_summary.json
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas    346022 Oct 13 06:46 log.46676269._089579.job.log.tgz.1
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas      7844 Oct 13 06:47 heartbeat.json
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:47 wrapper_checkpoint.txt
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:47 boinc_mmap_file
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas        95 Oct 13 06:47 pilot_heartbeat.json
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas       815 Oct 13 06:47 pilotlog.txt
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas    910077 Oct 13 06:47 log.46676269._089579.job.log.1
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas       357 Oct 13 06:47 output.list
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:47 runtime_log
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas   1280000 Oct 13 06:47 result.tar.gz
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 06:47 runtime_log.err
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas       658 Oct 13 06:47 ITENDmmWIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmx3UMDmaiUlNm.diag
[2025-10-13 06:47:32] -rw-r--r-- 1 boincer umatlas     21047 Oct 13 06:47 stderr.txt
[2025-10-13 06:47:32] HITS file was successfully produced:
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas 191722928 Oct 13 06:46 shared/HITS.pool.root.1
[2025-10-13 06:47:32]  *** Contents of shared directory: ***
[2025-10-13 06:47:32] total 403932
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas 220019635 Oct 13 04:59 ATLAS.root_0
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:59 start_atlas.sh
[2025-10-13 06:47:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 04:59 input.tar.gz
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas 191722928 Oct 13 06:46 HITS.pool.root.1
[2025-10-13 06:47:32] -rw------- 1 boincer umatlas   1280000 Oct 13 06:47 result.tar.gz
06:47:34 (27264): run_atlas exited; CPU time 47687.055617
06:47:34 (27264): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN