Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:12:10 (1798564): wrapper (7.7.26015): starting
09:12:10 (1798564): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 09:12:10] Arguments: --nthreads 12
[2025-10-13 09:12:10] Threads: 12
[2025-10-13 09:12:10] Checking for CVMFS
[2025-10-13 09:12:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:12:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:12:11] 2.11.0.0 3299214 4306 92764 151654 1 188 5519028 6144001 14768 130560 0 84537600 100.000 152806 168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 09:12:11] CVMFS is ok
[2025-10-13 09:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:12:11] Checking for apptainer binary...
[2025-10-13 09:12:11] apptainer is not installed, using version from CVMFS
[2025-10-13 09:12:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:12:11] radiat0r
[2025-10-13 09:12:11] apptainer works
[2025-10-13 09:12:11] Set ATHENA_PROC_NUMBER=12
[2025-10-13 09:12:11] Set ATHENA_CORE_NUMBER=12
[2025-10-13 09:12:11] Starting ATLAS job with PandaID=6842528891
[2025-10-13 09:12:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:02:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:02:39]  storage_token=
[2025-10-13 10:02:39]  surl=/var/lib/boinc/slots/22/PanDA_Pilot-6842528891/log.46676269._096305.job.log.tgz.1
[2025-10-13 10:02:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/d7/log.46676269._096305.job.log.tgz.1
[2025-10-13 10:02:39]  workdir=None
[2025-10-13 10:02:39] ]
[2025-10-13 10:02:39] 2025-10-13 10:01:31,156 | INFO     | transferring file log.46676269._096305.job.log.tgz.1 from /var/lib/boinc/slots/22/PanDA_Pilot-6842528891/log.46676269._096305.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-13 10:02:39] 2025-10-13 10:01:31,156 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/22/PanDA_Pilot-6842528891/log.46676269._096305.job.log.tgz.1 /var/lib/boinc/slots/22/log.46676269._096305.j
[2025-10-13 10:02:39] 2025-10-13 10:01:31,183 | INFO     | adding to output.list: log.46676269._096305.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/d7/log.46676269._096305.job.log.tg
[2025-10-13 10:02:39] 2025-10-13 10:01:31,184 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:02:39] 2025-10-13 10:01:31,184 | INFO     | summary of transferred files:
[2025-10-13 10:02:39] 2025-10-13 10:01:31,184 | INFO     |  -- lfn=log.46676269._096305.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:02:39] 2025-10-13 10:01:31,184 | INFO     | stage-out finished correctly
[2025-10-13 10:02:39] 2025-10-13 10:01:31,219 | INFO     | time since job start (2943s) is within the limit (172800.0s)
[2025-10-13 10:02:39] 2025-10-13 10:01:31,285 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:02:39] 2025-10-13 10:01:31,383 | INFO     | job 6842528891 has state=finished
[2025-10-13 10:02:39] 2025-10-13 10:01:31,387 | INFO     | preparing for final server update for job 6842528891 in state='finished'
[2025-10-13 10:02:39] 2025-10-13 10:01:31,387 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:02:39] 2025-10-13 10:01:31,387 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:02:39] 2025-10-13 10:01:31,388 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:02:39] 2025-10-13 10:01:31,388 | INFO     | job 6842528891 has finished - writing final server update
[2025-10-13 10:02:39] 2025-10-13 10:01:31,388 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:02:39] 2025-10-13 10:01:31,391 | INFO     | executing command: lscpu
[2025-10-13 10:02:39] 2025-10-13 10:01:31,594 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:02:39] 2025-10-13 10:01:33,711 | INFO     | PID=1803273 has CPU usage=18.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 10:02:39] 2025-10-13 10:01:33,711 | INFO     | .. there are 17 such processes running
[2025-10-13 10:02:39] 2025-10-13 10:01:34,235 | WARNING  | process 1811426 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 10:02:39] 2025-10-13 10:01:34,235 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6842528891/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:02:39] 2025-10-13 10:01:34,712 | INFO     | time since job start (2946s) is within the limit (172800.0s)
[2025-10-13 10:02:39] 2025-10-13 10:01:35,080 | INFO     | number of running child processes to parent process 1811426: 1
[2025-10-13 10:02:39] 2025-10-13 10:01:35,080 | INFO     | maximum number of monitored processes: 6
[2025-10-13 10:02:39] 2025-10-13 10:01:36,715 | INFO     | time since job start (2948s) is within the limit (172800.0s)
[2025-10-13 10:02:39] 2025-10-13 10:01:37,582 | INFO     | monitor loop #206: job 0:6842528891 is in state 'finished'
[2025-10-13 10:02:39] 2025-10-13 10:01:37,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:02:39] 2025-10-13 10:01:38,719 | INFO     | time since job start (2950s) is within the limit (172800.0s)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,314 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:02:39] 2025-10-13 10:01:39,377 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2379.1150546875
[2025-10-13 10:02:39] 2025-10-13 10:01:39,474 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6842528891/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,475 | INFO     | extracted standard info from prmon json
[2025-10-13 10:02:39] 2025-10-13 10:01:39,475 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:02:39] 2025-10-13 10:01:39,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:02:39] 2025-10-13 10:01:39,475 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:02:39] 2025-10-13 10:01:39,475 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:02:39] 2025-10-13 10:01:39,477 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:02:39] 2025-10-13 10:01:39,477 | INFO     | sum of square deviations: 21358540.0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,477 | INFO     | sum of deviations: -568833052.0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,477 | INFO     | mean x: 1760348309.0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,477 | INFO     | mean y: 2681910.8536585364
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | -- intersect: 46885301284.252266
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | intersect: 46885301284.252266
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | chi2: 0.003543701829684905
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | -- intersect: 46885301284.252266
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | current memory leak: -26.63 B/s (using 41 data points, chi2=0.00)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,478 | INFO     | could have reported an average CPU frequency of 2396 MHz (5 samples)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | ..............................
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . Timing measurements:
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . get job = 0 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . initial setup = 4 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . payload setup = 9 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . stage-in = 0 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . payload execution = 2910 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . stage-out = 0 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | . log creation = 0 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,479 | INFO     | ..............................
[2025-10-13 10:02:39] 2025-10-13 10:01:39,576 | INFO     | 
[2025-10-13 10:02:39] 2025-10-13 10:01:39,576 | INFO     | job summary report
[2025-10-13 10:02:39] 2025-10-13 10:01:39,576 | INFO     | --------------------------------------------------
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | PanDA job id: 6842528891
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | task id: 46676269
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | errors: (none)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | pilot state: finished 
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | transexitcode: 0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | exeerrorcode: 0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | exeerrordiag: 
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | exitcode: 0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,577 | INFO     | exitmsg: OK
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | cpuconsumptiontime: 30730 s
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | nevents: 400
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | neventsw: 0
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | pid: 1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | pgrp: 1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | corecount: 12
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | event service: False
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | sizes: {0: 2348636, 1: 2348835, 8: 2349097, 11: 2349125, 2923: 2374516, 2924: 2383700, 2932: 2383870}
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | --------------------------------------------------
[2025-10-13 10:02:39] 2025-10-13 10:01:39,578 | INFO     | 
[2025-10-13 10:02:39] 2025-10-13 10:01:39,579 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2025-10-13 10:02:39] 2025-10-13 10:01:39,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:02:39] 2025-10-13 10:01:39,610 | INFO     | job 6842528891 has completed (purged errors)
[2025-10-13 10:02:39] 2025-10-13 10:01:39,610 | INFO     | overall cleanup function is called
[2025-10-13 10:02:39] 2025-10-13 10:01:40,618 | INFO     | --- collectZombieJob: --- 10, [1811426]
[2025-10-13 10:02:39] 2025-10-13 10:01:40,619 | INFO     | zombie collector waiting for pid 1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:40,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:02:39] 2025-10-13 10:01:40,619 | INFO     | collected zombie processes
[2025-10-13 10:02:39] 2025-10-13 10:01:40,619 | INFO     | will attempt to kill all subprocesses of pid=1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:41,292 | INFO     | process IDs to be killed: [1811426] (in reverse order)
[2025-10-13 10:02:39] 2025-10-13 10:01:41,570 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:02:39] 2025-10-13 10:01:41,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:02:39] 2025-10-13 10:01:41,599 | INFO     | did not find any defunct processes belonging to 1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:41,625 | INFO     | did not find any defunct processes belonging to 1811426
[2025-10-13 10:02:39] 2025-10-13 10:01:41,625 | INFO     | ready for new job
[2025-10-13 10:02:39] 2025-10-13 10:01:41,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:02:39] 2025-10-13 10:01:41,628 | INFO     | ***************************************
[2025-10-13 10:02:39] 2025-10-13 10:01:41,628 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:02:39] 2025-10-13 10:01:41,628 | INFO     | ***************************************
[2025-10-13 10:02:39] 2025-10-13 10:01:41,629 | INFO     | 
[2025-10-13 10:02:39] 2025-10-13 10:01:41,666 | INFO     | architecture information:
[2025-10-13 10:02:39] 2025-10-13 10:01:41,667 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:02:39] 2025-10-13 10:01:41,690 | INFO     | cat /etc/os-release:
[2025-10-13 10:02:39] NAME="CentOS Linux"
[2025-10-13 10:02:39] VERSION="7 (Core)"
[2025-10-13 10:02:39] ID="centos"
[2025-10-13 10:02:39] ID_LIKE="rhel fedora"
[2025-10-13 10:02:39] VERSION_ID="7"
[2025-10-13 10:02:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:02:39] ANSI_COLOR="0;31"
[2025-10-13 10:02:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:02:39] HOME_URL="https://www.centos.org/"
[2025-10-13 10:02:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:02:39] 
[2025-10-13 10:02:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:02:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:02:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:02:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:02:39] 
[2025-10-13 10:02:39] 2025-10-13 10:01:41,691 | INFO     | ***************************************
[2025-10-13 10:02:39] 2025-10-13 10:01:42,194 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2025-10-13 10:02:39] 2025-10-13 10:01:42,224 | INFO     | sufficient remaining disk space (1724377989120 B)
[2025-10-13 10:02:39] 2025-10-13 10:01:42,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:02:39] 2025-10-13 10:01:42,225 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:02:39] 2025-10-13 10:01:42,225 | INFO     | update_server=False
[2025-10-13 10:02:39] 2025-10-13 10:01:42,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:02:39] 2025-10-13 10:01:42,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:02:39] 2025-10-13 10:01:42,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:02:39] 2025-10-13 10:01:42,598 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:02:39] 2025-10-13 10:01:42,599 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:02:39] 2025-10-13 10:01:42,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:02:39] 2025-10-13 10:01:42,599 | INFO     | will abort loop
[2025-10-13 10:02:39] 2025-10-13 10:01:42,834 | INFO     | all job control threads have been joined
[2025-10-13 10:02:39] 2025-10-13 10:01:43,158 | INFO     | all payload control threads have been joined
[2025-10-13 10:02:39] 2025-10-13 10:01:43,227 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,230 | INFO     | all data control threads have been joined
[2025-10-13 10:02:39] 2025-10-13 10:01:43,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,488 | INFO     | [job] validate thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,604 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,738 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,838 | INFO     | [job] control thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,872 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:43,930 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:44,146 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:44,162 | INFO     | [payload] control thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:44,232 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:44,236 | INFO     | [data] control thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:44,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:02:39] 2025-10-13 10:01:44,698 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:45,586 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:01:46,228 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:02:39] 2025-10-13 10:02:12,808 | INFO     | PID=1803273 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 10:02:39] 2025-10-13 10:02:12,808 | INFO     | .. there are 17 such processes running
[2025-10-13 10:02:39] 2025-10-13 10:02:12,809 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:02:39] 2025-10-13 10:02:12,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:02:39] 2025-10-13 10:02:12,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:02:39] 2025-10-13 10:02:32,890 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:02:39] 2025-10-13 10:02:33,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539184121664)>', '<ExcThread(monitor, started 140538737043200)>']
[2025-10-13 10:02:39] 2025-10-13 10:02:33,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:02:39] 2025-10-13 10:02:33,893 | INFO     | [monitor] control thread has ended
[2025-10-13 10:02:39] 2025-10-13 10:02:38,888 | INFO     | all workflow threads have been joined
[2025-10-13 10:02:39] 2025-10-13 10:02:38,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:02:39] 2025-10-13 10:02:38,889 | INFO     | traces error code: 0
[2025-10-13 10:02:39] 2025-10-13 10:02:38,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:02:39] 2025-10-13 10:02:39,049 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:02:39] 2025-10-13 10:02:39,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:02:39] 2025-10-13 10:02:39,056 [wrapper] pilotpid: 1803273
[2025-10-13 10:02:39] 2025-10-13 10:02:39,061 [wrapper] Pilot exit status: 0
[2025-10-13 10:02:39] 2025-10-13 10:02:39,075 [wrapper] pandaids: 6842528891
[2025-10-13 10:02:39] 2025-10-13 10:02:39,257 [wrapper] cleanup supervisor_pilot 2214362 1803274
[2025-10-13 10:02:39] 2025-10-13 10:02:39,261 [wrapper] Test setup, not cleaning
[2025-10-13 10:02:39] 2025-10-13 10:02:39,264 [wrapper] apfmon messages muted
[2025-10-13 10:02:39] 2025-10-13 10:02:39,267 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:02:39] 2025-10-13 10:02:39,271 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:02:39]  *** Error codes and diagnostics ***
[2025-10-13 10:02:39]     "exeErrorCode": 0,
[2025-10-13 10:02:39]     "exeErrorDiag": "",
[2025-10-13 10:02:39]     "pilotErrorCode": 0,
[2025-10-13 10:02:39]     "pilotErrorDiag": "",
[2025-10-13 10:02:39]  *** Listing of results directory ***
[2025-10-13 10:02:39] total 401832
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:01 pilot3.tar.gz
[2025-10-13 10:02:39] -rwx------ 1 boinc boinc     36292 Oct 13 04:32 runpilot2-wrapper.sh
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:32 queuedata.json
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:02:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:12 run_atlas
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:12 job.xml
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc 219920271 Oct 13 09:12 EVNT.46676267._001564.pool.root.1
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:12 start_atlas.sh
[2025-10-13 10:02:39] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:12 shared
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc    569683 Oct 13 09:12 input.tar.gz
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc      9397 Oct 13 09:12 init_data.xml
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:12 boinc_setup_complete
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:12 boinc_lockfile
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc      2549 Oct 13 09:12 pandaJob.out
[2025-10-13 10:02:39] -rw------- 1 boinc boinc    972857 Oct 13 09:12 agis_schedconf.cvmfs.json
[2025-10-13 10:02:39] -rw------- 1 boinc boinc   1560580 Oct 13 09:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:02:39] drwx------ 5 boinc boinc      4096 Oct 13 09:12 pilot3
[2025-10-13 10:02:39] -rw------- 1 boinc boinc 186044723 Oct 13 10:00 HITS.46676269._096305.pool.root.1
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:01 boinc_task_state.xml
[2025-10-13 10:02:39] -rw------- 1 boinc boinc      1027 Oct 13 10:01 memory_monitor_summary.json
[2025-10-13 10:02:39] -rw------- 1 boinc boinc    362305 Oct 13 10:01 log.46676269._096305.job.log.tgz.1
[2025-10-13 10:02:39] -rw------- 1 boinc boinc      7748 Oct 13 10:01 heartbeat.json
[2025-10-13 10:02:39] -rw------- 1 boinc boinc        95 Oct 13 10:02 pilot_heartbeat.json
[2025-10-13 10:02:39] -rw------- 1 boinc boinc      5014 Oct 13 10:02 pilotlog.txt
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:02 boinc_mmap_file
[2025-10-13 10:02:39] -rw------- 1 boinc boinc    441654 Oct 13 10:02 log.46676269._096305.job.log.1
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:02 wrapper_checkpoint.txt
[2025-10-13 10:02:39] -rw------- 1 boinc boinc       357 Oct 13 10:02 output.list
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:02 runtime_log
[2025-10-13 10:02:39] -rw------- 1 boinc boinc    819200 Oct 13 10:02 result.tar.gz
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc      8672 Oct 13 10:02 runtime_log.err
[2025-10-13 10:02:39] -rw------- 1 boinc boinc       644 Oct 13 10:02 EXHKDmfPPS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbhmNDmfZ0kEo.diag
[2025-10-13 10:02:39] -rw-r--r-- 1 boinc boinc     21966 Oct 13 10:02 stderr.txt
[2025-10-13 10:02:39] HITS file was successfully produced:
[2025-10-13 10:02:39] -rw------- 1 boinc boinc 186044723 Oct 13 10:00 shared/HITS.pool.root.1
[2025-10-13 10:02:39]  *** Contents of shared directory: ***
[2025-10-13 10:02:39] total 397840
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc 219920271 Oct 13 09:12 ATLAS.root_0
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:12 start_atlas.sh
[2025-10-13 10:02:39] -rw-r--r-- 2 boinc boinc    569683 Oct 13 09:12 input.tar.gz
[2025-10-13 10:02:39] -rw------- 1 boinc boinc 186044723 Oct 13 10:00 HITS.pool.root.1
[2025-10-13 10:02:39] -rw------- 1 boinc boinc    819200 Oct 13 10:02 result.tar.gz
10:02:41 (1798564): run_atlas exited; CPU time 30914.141250
10:02:41 (1798564): called boinc_finish(0)

</stderr_txt>
]]>

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