Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:03 (2478368): wrapper (7.7.26015): starting
05:12:03 (2478368): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:12:03] Arguments: --nthreads 8
[2025-10-13 05:12:03] Threads: 8
[2025-10-13 05:12:03] Checking for CVMFS
[2025-10-13 05:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:12:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:12:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:12:03] 2.13.2.0 1630706 125055 166648 151654 0 545 23138544 40960000 19056 16776704 1 355164982 99.726 254129806 33860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:12:03] CVMFS is ok
[2025-10-13 05:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:12:03] Further information can be found at the LHC@home message board.
[2025-10-13 05:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:12:03] Checking for apptainer binary...
[2025-10-13 05:12:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:12:03] Running /usr/bin/apptainer --version
[2025-10-13 05:12:03] apptainer version 1.4.3-1.el9
[2025-10-13 05:12:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:12:03] c-212-16.aglt2.org
[2025-10-13 05:12:03] apptainer works
[2025-10-13 05:12:03] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:12:03] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:12:03] Starting ATLAS job with PandaID=6841125999
[2025-10-13 05:12:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:05:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:05:41] 2025-10-13 12:04:45,775 | INFO     | mean x: 1760351917.5235295
[2025-10-13 08:05:41] 2025-10-13 12:04:45,775 | INFO     | mean y: 2479749.605882353
[2025-10-13 08:05:41] 2025-10-13 12:04:45,775 | INFO     | -- intersect: -7341901332.616847
[2025-10-13 08:05:41] 2025-10-13 12:04:45,776 | INFO     | intersect: -7341901332.616847
[2025-10-13 08:05:41] 2025-10-13 12:04:45,776 | INFO     | chi2: 1.8636608907977106
[2025-10-13 08:05:41] 2025-10-13 12:04:45,776 | INFO     | sum of square deviations: 1392883641.9030313
[2025-10-13 08:05:41] 2025-10-13 12:04:45,777 | INFO     | sum of deviations: 17183614634.76364
[2025-10-13 08:05:41] 2025-10-13 12:04:45,777 | INFO     | mean x: 1760351765.0242424
[2025-10-13 08:05:41] 2025-10-13 12:04:45,777 | INFO     | mean y: 2492086.309090909
[2025-10-13 08:05:41] 2025-10-13 12:04:45,777 | INFO     | -- intersect: -21714473668.61536
[2025-10-13 08:05:41] 2025-10-13 12:04:45,778 | INFO     | intersect: -21714473668.61536
[2025-10-13 08:05:41] 2025-10-13 12:04:45,778 | INFO     | chi2: 1.0775079709634452
[2025-10-13 08:05:41] 2025-10-13 12:04:45,778 | INFO     | current chi2=1.0775079709634452 (change=42.18326004028367 %)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,778 | INFO     | sum of square deviations: 1270054651.9000003
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | sum of deviations: 16453279384.374994
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | mean x: 1760351612.525
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | mean y: 2491179.28125
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | -- intersect: -22802477766.17272
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | intersect: -22802477766.17272
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | chi2: 1.0783015281688464
[2025-10-13 08:05:41] 2025-10-13 12:04:45,779 | INFO     | current chi2=1.0783015281688464 (change=-0.07364745568347336 %)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,780 | INFO     | right removable region: 159
[2025-10-13 08:05:41] 2025-10-13 12:04:45,780 | INFO     | sum of square deviations: 1392881201.9030313
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | sum of deviations: -11403593809.951515
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | mean x: 1760352070.0242424
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | mean y: 2500128.987878788
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | -- intersect: 14414597830.957806
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | intersect: 14414597830.957806
[2025-10-13 08:05:41] 2025-10-13 12:04:45,781 | INFO     | chi2: 0.8089412769705864
[2025-10-13 08:05:41] 2025-10-13 12:04:45,782 | INFO     | current chi2=0.8089412769705864 (change=56.59396615741977 %)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,782 | INFO     | sum of square deviations: 1270049771.9000003
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | sum of deviations: -11758863697.750013
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | mean x: 1760352222.525
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | mean y: 2500563.9375
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | -- intersect: 16300871149.631844
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | intersect: 16300871149.631844
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | chi2: 0.8084757691214056
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | current chi2=0.8084757691214056 (change=0.057545320338213315 %)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | left removable region: 20
[2025-10-13 08:05:41] 2025-10-13 12:04:45,783 | INFO     | sum of square deviations: 832720885.884891
[2025-10-13 08:05:41] 2025-10-13 12:04:45,784 | INFO     | sum of deviations: -556726119.8920861
[2025-10-13 08:05:41] 2025-10-13 12:04:45,784 | INFO     | mean x: 1760352192.028777
[2025-10-13 08:05:41] 2025-10-13 12:04:45,784 | INFO     | mean y: 2512998.2230215827
[2025-10-13 08:05:41] 2025-10-13 12:04:45,784 | INFO     | -- intersect: 1179418804.386723
[2025-10-13 08:05:41] 2025-10-13 12:04:45,784 | INFO     | intersect: 1179418804.386723
[2025-10-13 08:05:41] 2025-10-13 12:04:45,785 | INFO     | chi2: 0.0022624582112089533
[2025-10-13 08:05:41] 2025-10-13 12:04:45,785 | INFO     | -- intersect: 1179418804.386723
[2025-10-13 08:05:41] 2025-10-13 12:04:45,785 | INFO     | current memory leak: -0.67 B/s (using 139 data points, chi2=0.00)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,785 | INFO     | could have reported an average CPU frequency of 3174 MHz (9 samples)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | ..............................
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . Timing measurements:
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . get job = 0 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . initial setup = 2 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . payload setup = 5 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . stage-in = 0 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . payload execution = 10317 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . stage-out = 0 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | . log creation = 0 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,786 | INFO     | ..............................
[2025-10-13 08:05:41] 2025-10-13 12:04:45,861 | INFO     | 
[2025-10-13 08:05:41] 2025-10-13 12:04:45,862 | INFO     | job summary report
[2025-10-13 08:05:41] 2025-10-13 12:04:45,862 | INFO     | --------------------------------------------------
[2025-10-13 08:05:41] 2025-10-13 12:04:45,862 | INFO     | PanDA job id: 6841125999
[2025-10-13 08:05:41] 2025-10-13 12:04:45,862 | INFO     | task id: 46676269
[2025-10-13 08:05:41] 2025-10-13 12:04:45,862 | INFO     | errors: (none)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | pilot state: finished 
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | transexitcode: 0
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | exeerrorcode: 0
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | exeerrordiag: 
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | exitcode: 0
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | exitmsg: OK
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | cpuconsumptiontime: 33110 s
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | nevents: 400
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | neventsw: 0
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | pid: 2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:45,863 | INFO     | pgrp: 2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | corecount: 8
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | event service: False
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 10327: 2377975, 10328: 2386973, 10329: 2387029, 10334: 2387415}
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | --------------------------------------------------
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | 
[2025-10-13 08:05:41] 2025-10-13 12:04:45,864 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 08:05:41] 2025-10-13 12:04:45,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | job 6841125999 has completed (purged errors)
[2025-10-13 08:05:41] 2025-10-13 12:04:45,892 | INFO     | overall cleanup function is called
[2025-10-13 08:05:41] 2025-10-13 12:04:45,895 | WARNING  | process 2500852 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 08:05:41] 2025-10-13 12:04:46,142 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:05:41] 2025-10-13 12:04:46,476 | INFO     | number of running child processes to parent process 2500852: 1
[2025-10-13 08:05:41] 2025-10-13 12:04:46,476 | INFO     | maximum number of monitored processes: 6
[2025-10-13 08:05:41] 2025-10-13 12:04:46,476 | INFO     | aborting job monitoring since job object (job id=6841125999) has expired
[2025-10-13 08:05:41] 2025-10-13 12:04:46,901 | INFO     | --- collectZombieJob: --- 10, [2500852]
[2025-10-13 08:05:41] 2025-10-13 12:04:46,901 | INFO     | zombie collector waiting for pid 2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:46,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:05:41] 2025-10-13 12:04:46,901 | INFO     | collected zombie processes
[2025-10-13 08:05:41] 2025-10-13 12:04:46,901 | INFO     | will attempt to kill all subprocesses of pid=2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:47,196 | INFO     | process IDs to be killed: [2500852] (in reverse order)
[2025-10-13 08:05:41] 2025-10-13 12:04:47,314 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:05:41] 2025-10-13 12:04:47,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:05:41] 2025-10-13 12:04:47,329 | INFO     | did not find any defunct processes belonging to 2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:47,344 | INFO     | did not find any defunct processes belonging to 2500852
[2025-10-13 08:05:41] 2025-10-13 12:04:47,345 | INFO     | ready for new job
[2025-10-13 08:05:41] 2025-10-13 12:04:47,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:05:41] 2025-10-13 12:04:47,347 | INFO     | ***************************************
[2025-10-13 08:05:41] 2025-10-13 12:04:47,347 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:05:41] 2025-10-13 12:04:47,347 | INFO     | ***************************************
[2025-10-13 08:05:41] 2025-10-13 12:04:47,347 | INFO     | 
[2025-10-13 08:05:41] 2025-10-13 12:04:47,352 | INFO     | architecture information:
[2025-10-13 08:05:41] 2025-10-13 12:04:47,352 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:05:41] 2025-10-13 12:04:47,370 | INFO     | cat /etc/os-release:
[2025-10-13 08:05:41] NAME="CentOS Linux"
[2025-10-13 08:05:41] VERSION="7 (Core)"
[2025-10-13 08:05:41] ID="centos"
[2025-10-13 08:05:41] ID_LIKE="rhel fedora"
[2025-10-13 08:05:41] VERSION_ID="7"
[2025-10-13 08:05:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:05:41] ANSI_COLOR="0;31"
[2025-10-13 08:05:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:05:41] HOME_URL="https://www.centos.org/"
[2025-10-13 08:05:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:05:41] 
[2025-10-13 08:05:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:05:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:05:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:05:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:05:41] 
[2025-10-13 08:05:41] 2025-10-13 12:04:47,370 | INFO     | ***************************************
[2025-10-13 08:05:41] 2025-10-13 12:04:47,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 08:05:41] 2025-10-13 12:04:47,894 | INFO     | sufficient remaining disk space (128211484672 B)
[2025-10-13 08:05:41] 2025-10-13 12:04:47,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:05:41] 2025-10-13 12:04:47,895 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:05:41] 2025-10-13 12:04:47,895 | INFO     | update_server=False
[2025-10-13 08:05:41] 2025-10-13 12:04:47,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:05:41] 2025-10-13 12:04:47,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:05:41] 2025-10-13 12:04:47,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:05:41] 2025-10-13 12:04:47,896 | INFO     | aborting loop
[2025-10-13 08:05:41] 2025-10-13 12:04:47,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:05:41] 2025-10-13 12:04:48,442 | INFO     | all data control threads have been joined
[2025-10-13 08:05:41] 2025-10-13 12:04:48,489 | INFO     | all job control threads have been joined
[2025-10-13 08:05:41] 2025-10-13 12:04:48,900 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:48,901 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:48,970 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,010 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,038 | INFO     | all payload control threads have been joined
[2025-10-13 08:05:41] 2025-10-13 12:04:49,116 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,132 | INFO     | [job] validate thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,448 | INFO     | [data] control thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,494 | INFO     | [job] control thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,689 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,733 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,914 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:49,918 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:50,043 | INFO     | [payload] control thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:50,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:05:41] 2025-10-13 12:04:51,877 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:51,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:04:58,587 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:05:41] 2025-10-13 12:04:59,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:05:41] 2025-10-13 12:05:18,815 | INFO     | PID=2488656 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:05:41] 2025-10-13 12:05:18,815 | INFO     | .. there are 18 such processes running
[2025-10-13 08:05:41] 2025-10-13 12:05:18,816 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:05:41] 2025-10-13 12:05:18,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:05:41] 2025-10-13 12:05:18,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:05:41] 2025-10-13 12:05:34,420 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:05:41] 2025-10-13 12:05:35,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352185100096)>', '<ExcThread(monitor, started 140351293593344)>']
[2025-10-13 08:05:41] 2025-10-13 12:05:35,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:05:41] 2025-10-13 12:05:35,899 | INFO     | [monitor] control thread has ended
[2025-10-13 08:05:41] 2025-10-13 12:05:40,838 | INFO     | all workflow threads have been joined
[2025-10-13 08:05:41] 2025-10-13 12:05:40,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:05:41] 2025-10-13 12:05:40,838 | INFO     | traces error code: 0
[2025-10-13 08:05:41] 2025-10-13 12:05:40,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:05:41] 2025-10-13 12:05:40,952 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:05:41] 2025-10-13 12:05:40,955 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:05:41] 2025-10-13 12:05:40,957 [wrapper] pilotpid: 2488656
[2025-10-13 08:05:41] 2025-10-13 12:05:40,959 [wrapper] Pilot exit status: 0
[2025-10-13 08:05:41] 2025-10-13 12:05:40,969 [wrapper] pandaids: 6841125999
[2025-10-13 08:05:41] 2025-10-13 12:05:41,050 [wrapper] cleanup supervisor_pilot 2904528 2488657
[2025-10-13 08:05:41] 2025-10-13 12:05:41,053 [wrapper] Test setup, not cleaning
[2025-10-13 08:05:41] 2025-10-13 12:05:41,055 [wrapper] apfmon messages muted
[2025-10-13 08:05:41] 2025-10-13 12:05:41,058 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:05:41] 2025-10-13 12:05:41,060 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:05:41]  *** Error codes and diagnostics ***
[2025-10-13 08:05:41]     "exeErrorCode": 0,
[2025-10-13 08:05:41]     "exeErrorDiag": "",
[2025-10-13 08:05:41]     "pilotErrorCode": 0,
[2025-10-13 08:05:41]     "pilotErrorDiag": "",
[2025-10-13 08:05:41]  *** Listing of results directory ***
[2025-10-13 08:05:41] total 410880
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:18 queuedata.json
[2025-10-13 08:05:41] -rwx------. 1 boincer umatlas     36292 Oct 12 22:18 runpilot2-wrapper.sh
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:05:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:12 run_atlas
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:12 job.xml
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas 223760823 Oct 13 05:12 EVNT.46676267._004371.pool.root.1
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:12 start_atlas.sh
[2025-10-13 08:05:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:12 shared
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 05:12 input.tar.gz
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:12 boinc_lockfile
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:12 pandaJob.out
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas    972857 Oct 13 05:12 agis_schedconf.cvmfs.json
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:05:41] drwx------. 5 boincer umatlas      4096 Oct 13 05:12 pilot3
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 08:02 init_data.xml
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas 189487186 Oct 13 08:04 HITS.46676269._094772.pool.root.1
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:04 boinc_task_state.xml
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas        95 Oct 13 08:04 pilot_heartbeat.json
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas      1046 Oct 13 08:04 memory_monitor_summary.json
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas    403170 Oct 13 08:04 log.46676269._094772.job.log.tgz.1
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas      7791 Oct 13 08:04 heartbeat.json
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:05 wrapper_checkpoint.txt
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:05 boinc_mmap_file
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas      4897 Oct 13 08:05 pilotlog.txt
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas   1392671 Oct 13 08:05 log.46676269._094772.job.log.1
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas       357 Oct 13 08:05 output.list
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:05 runtime_log
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas   1812480 Oct 13 08:05 result.tar.gz
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas       658 Oct 13 08:05 xj0LDmlJNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJUmNDmOtFbkm.diag
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 08:05 runtime_log.err
[2025-10-13 08:05:41] -rw-r--r--. 1 boincer umatlas     21105 Oct 13 08:05 stderr.txt
[2025-10-13 08:05:41] HITS file was successfully produced:
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas 189487186 Oct 13 08:04 shared/HITS.pool.root.1
[2025-10-13 08:05:41]  *** Contents of shared directory: ***
[2025-10-13 08:05:41] total 405920
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas 223760823 Oct 13 05:12 ATLAS.root_0
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:12 start_atlas.sh
[2025-10-13 08:05:41] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 05:12 input.tar.gz
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas 189487186 Oct 13 08:04 HITS.pool.root.1
[2025-10-13 08:05:41] -rw-------. 1 boincer umatlas   1812480 Oct 13 08:05 result.tar.gz
08:05:42 (2478368): run_atlas exited; CPU time 33404.343799
08:05:42 (2478368): called boinc_finish(0)

</stderr_txt>
]]>

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