Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:58:29 (652): wrapper (7.7.26015): starting
04:58:29 (652): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 04:58:29] Arguments: --nthreads 12
[2025-10-13 04:58:29] Threads: 12
[2025-10-13 04:58:29] Checking for CVMFS
[2025-10-13 04:58:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:58:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:58:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:58:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:58:30] 2.11.2.0 30551 54053 87932 151654 2 59 15295647 20275200 1 130560 0 31740927 99.959 2436256 39898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:58:30] CVMFS is ok
[2025-10-13 04:58:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:58:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:58:30] Further information can be found at the LHC@home message board.
[2025-10-13 04:58:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:58:30] Checking for apptainer binary...
[2025-10-13 04:58:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:58:30] Running /usr/bin/apptainer --version
[2025-10-13 04:58:30] apptainer version 1.3.2-1.el7
[2025-10-13 04:58:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:58:31] c-205-16.aglt2.org
[2025-10-13 04:58:31] apptainer works
[2025-10-13 04:58:31] Set ATHENA_PROC_NUMBER=12
[2025-10-13 04:58:31] Set ATHENA_CORE_NUMBER=12
[2025-10-13 04:58:31] Starting ATLAS job with PandaID=6841069369
[2025-10-13 04:58:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:13:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:13:00]  workdir=None
[2025-10-13 06:13:00] ]
[2025-10-13 06:13:00] 2025-10-13 10:11:58,965 | INFO     | time since job start (4391s) is within the limit (172800.0s)
[2025-10-13 06:13:00] 2025-10-13 10:11:58,971 | INFO     | transferring file log.46676269._093501.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841069369/log.46676269._093501.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:13:00] 2025-10-13 10:11:58,971 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841069369/log.46676269._093501.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093501.job
[2025-10-13 06:13:00] 2025-10-13 10:11:58,994 | INFO     | adding to output.list: log.46676269._093501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/6e/log.46676269._093501.job.log.tg
[2025-10-13 06:13:00] 2025-10-13 10:11:58,995 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:13:00] 2025-10-13 10:11:58,995 | INFO     | summary of transferred files:
[2025-10-13 06:13:00] 2025-10-13 10:11:58,995 | INFO     |  -- lfn=log.46676269._093501.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:13:00] 2025-10-13 10:11:58,996 | INFO     | stage-out finished correctly
[2025-10-13 06:13:00] 2025-10-13 10:11:59,522 | INFO     | monitor loop #326: job 0:6841069369 is in state 'finished'
[2025-10-13 06:13:00] 2025-10-13 10:11:59,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:00] 2025-10-13 10:12:00,976 | INFO     | time since job start (4393s) is within the limit (172800.0s)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,025 | INFO     | monitor loop #327: job 0:6841069369 is in state 'finished'
[2025-10-13 06:13:00] 2025-10-13 10:12:02,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,095 | INFO     | PID=4488 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 06:13:00] 2025-10-13 10:12:02,239 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:13:00] 2025-10-13 10:12:02,320 | INFO     | job 6841069369 has state=finished
[2025-10-13 06:13:00] 2025-10-13 10:12:02,320 | INFO     | preparing for final server update for job 6841069369 in state='finished'
[2025-10-13 06:13:00] 2025-10-13 10:12:02,379 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,379 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,380 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:13:00] 2025-10-13 10:12:02,380 | INFO     | job 6841069369 has finished - writing final server update
[2025-10-13 06:13:00] 2025-10-13 10:12:02,380 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:13:00] 2025-10-13 10:12:02,381 | INFO     | executing command: lscpu
[2025-10-13 06:13:00] 2025-10-13 10:12:02,408 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:13:00] 2025-10-13 10:12:03,096 | INFO     | time since job start (4396s) is within the limit (172800.0s)
[2025-10-13 06:13:00] 2025-10-13 10:12:04,536 | INFO     | monitor loop #328: job 0:6841069369 is in state 'finished'
[2025-10-13 06:13:00] 2025-10-13 10:12:04,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:00] 2025-10-13 10:12:05,102 | INFO     | time since job start (4398s) is within the limit (172800.0s)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,039 | INFO     | monitor loop #329: job 0:6841069369 is in state 'finished'
[2025-10-13 06:13:00] 2025-10-13 10:12:07,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,107 | INFO     | time since job start (4400s) is within the limit (172800.0s)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,232 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:13:00] 2025-10-13 10:12:07,235 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1917.5
[2025-10-13 06:13:00] 2025-10-13 10:12:07,237 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069369/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,238 | INFO     | extracted standard info from prmon json
[2025-10-13 06:13:00] 2025-10-13 10:12:07,238 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:13:00] 2025-10-13 10:12:07,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:13:00] 2025-10-13 10:12:07,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:13:00] 2025-10-13 10:12:07,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:13:00] 2025-10-13 10:12:07,241 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:13:00] 2025-10-13 10:12:07,241 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,241 | INFO     | sum of deviations: -4742298478.0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,241 | INFO     | mean x: 1760348213.0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | mean y: 2718960.446153846
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | -- intersect: 98058178280.1164
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | intersect: 98058178280.1164
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | chi2: 0.057239613106972224
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | -- intersect: 98058178280.1164
[2025-10-13 06:13:00] 2025-10-13 10:12:07,242 | INFO     | current memory leak: -55.70 B/s (using 65 data points, chi2=0.06)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | could have reported an average CPU frequency of 2074 MHz (6 samples)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | ..............................
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | . Timing measurements:
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | . get job = 0 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | . initial setup = 2 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | . payload setup = 7 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,243 | INFO     | . stage-in = 0 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,244 | INFO     | . payload execution = 4364 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,244 | INFO     | . stage-out = 0 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,244 | INFO     | . log creation = 0 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,244 | INFO     | ..............................
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | 
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | job summary report
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | --------------------------------------------------
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | PanDA job id: 6841069369
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | task id: 46676269
[2025-10-13 06:13:00] 2025-10-13 10:12:07,329 | INFO     | errors: (none)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | pilot state: finished 
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | transexitcode: 0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | exeerrorcode: 0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | exeerrordiag: 
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | exitcode: 0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | exitmsg: OK
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | cpuconsumptiontime: 48141 s
[2025-10-13 06:13:00] 2025-10-13 10:12:07,330 | INFO     | nevents: 400
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | neventsw: 0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | pid: 10999
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | pgrp: 10999
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | corecount: 12
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | event service: False
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | sizes: {0: 2348624, 1: 2348879, 6: 2349141, 12: 2349169, 4375: 2375243, 4376: 2384241, 4379: 2384425, 4384: 2384619}
[2025-10-13 06:13:00] 2025-10-13 10:12:07,331 | INFO     | --------------------------------------------------
[2025-10-13 06:13:00] 2025-10-13 10:12:07,332 | INFO     | 
[2025-10-13 06:13:00] 2025-10-13 10:12:07,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:13:00] 2025-10-13 10:12:07,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | job 6841069369 has completed (purged errors)
[2025-10-13 06:13:00] 2025-10-13 10:12:07,355 | INFO     | overall cleanup function is called
[2025-10-13 06:13:00] 2025-10-13 10:12:08,363 | INFO     | --- collectZombieJob: --- 10, [10999]
[2025-10-13 06:13:00] 2025-10-13 10:12:08,363 | INFO     | zombie collector waiting for pid 10999
[2025-10-13 06:13:00] 2025-10-13 10:12:08,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:13:00] 2025-10-13 10:12:08,364 | INFO     | collected zombie processes
[2025-10-13 06:13:00] 2025-10-13 10:12:08,364 | INFO     | will attempt to kill all subprocesses of pid=10999
[2025-10-13 06:13:00] 2025-10-13 10:12:08,458 | INFO     | process IDs to be killed: [10999] (in reverse order)
[2025-10-13 06:13:00] 2025-10-13 10:12:08,514 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:13:00] 2025-10-13 10:12:08,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:13:00] 2025-10-13 10:12:08,518 | INFO     | did not find any defunct processes belonging to 10999
[2025-10-13 06:13:00] 2025-10-13 10:12:08,521 | INFO     | did not find any defunct processes belonging to 10999
[2025-10-13 06:13:00] 2025-10-13 10:12:08,521 | INFO     | ready for new job
[2025-10-13 06:13:00] 2025-10-13 10:12:08,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:13:00] 2025-10-13 10:12:08,523 | INFO     | ***************************************
[2025-10-13 06:13:00] 2025-10-13 10:12:08,523 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:13:00] 2025-10-13 10:12:08,523 | INFO     | ***************************************
[2025-10-13 06:13:00] 2025-10-13 10:12:08,523 | INFO     | 
[2025-10-13 06:13:00] 2025-10-13 10:12:08,524 | INFO     | architecture information:
[2025-10-13 06:13:00] 2025-10-13 10:12:08,524 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:13:00] 2025-10-13 10:12:08,540 | INFO     | cat /etc/os-release:
[2025-10-13 06:13:00] NAME="CentOS Linux"
[2025-10-13 06:13:00] VERSION="7 (Core)"
[2025-10-13 06:13:00] ID="centos"
[2025-10-13 06:13:00] ID_LIKE="rhel fedora"
[2025-10-13 06:13:00] VERSION_ID="7"
[2025-10-13 06:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:13:00] ANSI_COLOR="0;31"
[2025-10-13 06:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:13:00] HOME_URL="https://www.centos.org/"
[2025-10-13 06:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:13:00] 
[2025-10-13 06:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:13:00] 
[2025-10-13 06:13:00] 2025-10-13 10:12:08,540 | INFO     | ***************************************
[2025-10-13 06:13:00] 2025-10-13 10:12:09,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:13:00] 2025-10-13 10:12:09,060 | INFO     | sufficient remaining disk space (29493297152 B)
[2025-10-13 06:13:00] 2025-10-13 10:12:09,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:13:00] 2025-10-13 10:12:09,061 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:13:00] 2025-10-13 10:12:09,061 | INFO     | update_server=False
[2025-10-13 06:13:00] 2025-10-13 10:12:09,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:13:00] 2025-10-13 10:12:09,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:13:00] 2025-10-13 10:12:09,061 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 06:13:00] 2025-10-13 10:12:09,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:00] 2025-10-13 10:12:09,062 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:13:00] 2025-10-13 10:12:09,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:13:00] 2025-10-13 10:12:09,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:13:00] 2025-10-13 10:12:09,181 | INFO     | all data control threads have been joined
[2025-10-13 06:13:00] 2025-10-13 10:12:09,371 | INFO     | all payload control threads have been joined
[2025-10-13 06:13:00] 2025-10-13 10:12:09,552 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:13:00] 2025-10-13 10:12:09,552 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:13:00] 2025-10-13 10:12:09,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:00] 2025-10-13 10:12:09,552 | INFO     | will abort loop
[2025-10-13 06:13:00] 2025-10-13 10:12:09,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:13:00] 2025-10-13 10:12:10,066 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,068 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,187 | INFO     | [data] control thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,376 | INFO     | [payload] control thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,450 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,502 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,522 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,558 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:10,580 | INFO     | all job control threads have been joined
[2025-10-13 06:13:00] 2025-10-13 10:12:11,081 | INFO     | [job] validate thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:11,174 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:11,298 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:11,532 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:11,585 | INFO     | [job] control thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:11,600 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:13,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:19,114 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:13:00] 2025-10-13 10:12:20,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:13:00] 2025-10-13 10:12:53,624 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:13:00] 2025-10-13 10:12:55,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826755352384)>', '<ExcThread(monitor, started 139825772472064)>']
[2025-10-13 06:13:00] 2025-10-13 10:12:56,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:13:00] 2025-10-13 10:12:56,262 | INFO     | [monitor] control thread has ended
[2025-10-13 06:13:00] 2025-10-13 10:13:00,438 | INFO     | all workflow threads have been joined
[2025-10-13 06:13:00] 2025-10-13 10:13:00,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:13:00] 2025-10-13 10:13:00,440 | INFO     | traces error code: 0
[2025-10-13 06:13:00] 2025-10-13 10:13:00,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:13:00] 2025-10-13 10:13:00,533 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:13:00] 2025-10-13 10:13:00,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:13:00] 2025-10-13 10:13:00,541 [wrapper] pilotpid: 4488
[2025-10-13 06:13:00] 2025-10-13 10:13:00,544 [wrapper] Pilot exit status: 0
[2025-10-13 06:13:00] 2025-10-13 10:13:00,560 [wrapper] pandaids: 6841069369
[2025-10-13 06:13:00] 2025-10-13 10:13:00,609 [wrapper] cleanup supervisor_pilot 21298 4489
[2025-10-13 06:13:00] 2025-10-13 10:13:00,613 [wrapper] Test setup, not cleaning
[2025-10-13 06:13:00] 2025-10-13 10:13:00,617 [wrapper] apfmon messages muted
[2025-10-13 06:13:00] 2025-10-13 10:13:00,621 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:13:00] 2025-10-13 10:13:00,625 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:13:00]  *** Error codes and diagnostics ***
[2025-10-13 06:13:00]     "exeErrorCode": 0,
[2025-10-13 06:13:00]     "exeErrorDiag": "",
[2025-10-13 06:13:00]     "pilotErrorCode": 0,
[2025-10-13 06:13:00]     "pilotErrorDiag": "",
[2025-10-13 06:13:00]  *** Listing of results directory ***
[2025-10-13 06:13:00] total 416604
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 06:13:00] -rwx------ 1 boincer umatlas     36292 Oct 12 20:50 runpilot2-wrapper.sh
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:50 queuedata.json
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:13:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:58 run_atlas
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:58 job.xml
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas 222300497 Oct 13 04:58 EVNT.46676267._004707.pool.root.1
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:58 start_atlas.sh
[2025-10-13 06:13:00] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:58 shared
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 04:58 input.tar.gz
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:58 boinc_lockfile
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas      2547 Oct 13 04:58 pandaJob.out
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas    972857 Oct 13 04:58 agis_schedconf.cvmfs.json
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas   1560580 Oct 13 04:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:13:00] drwx------ 5 boincer umatlas      4096 Oct 13 04:58 pilot3
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 06:09 init_data.xml
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas 198397742 Oct 13 06:11 HITS.46676269._093501.pool.root.1
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas       529 Oct 13 06:11 boinc_task_state.xml
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas        95 Oct 13 06:11 pilot_heartbeat.json
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas      1048 Oct 13 06:11 memory_monitor_summary.json
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas    364876 Oct 13 06:11 log.46676269._093501.job.log.tgz.1
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas      7848 Oct 13 06:12 heartbeat.json
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:12 boinc_mmap_file
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:12 wrapper_checkpoint.txt
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas      4810 Oct 13 06:13 pilotlog.txt
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas    638963 Oct 13 06:13 log.46676269._093501.job.log.1
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas       357 Oct 13 06:13 output.list
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:13 runtime_log
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas   1024000 Oct 13 06:13 result.tar.gz
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 06:13 runtime_log.err
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas       659 Oct 13 06:13 3mgLDmVwLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdFmNDmN1MuRo.diag
[2025-10-13 06:13:00] -rw-r--r-- 1 boincer umatlas     22241 Oct 13 06:13 stderr.txt
[2025-10-13 06:13:00] HITS file was successfully produced:
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas 198397742 Oct 13 06:11 shared/HITS.pool.root.1
[2025-10-13 06:13:00]  *** Contents of shared directory: ***
[2025-10-13 06:13:00] total 412420
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas 222300497 Oct 13 04:58 ATLAS.root_0
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:58 start_atlas.sh
[2025-10-13 06:13:00] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 04:58 input.tar.gz
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas 198397742 Oct 13 06:11 HITS.pool.root.1
[2025-10-13 06:13:00] -rw------- 1 boincer umatlas   1024000 Oct 13 06:13 result.tar.gz
06:13:02 (652): run_atlas exited; CPU time 48112.932690
06:13:02 (652): called boinc_finish(0)

</stderr_txt>
]]>

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