Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:26:36 (3616887): wrapper (7.7.26015): starting
19:26:36 (3616887): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:26:36] Arguments: --nthreads 3
[2025-10-13 19:26:36] Threads: 3
[2025-10-13 19:26:36] Checking for CVMFS
[2025-10-13 19:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:26:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:26:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:26:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:26:37] 2.9.2.0 2127501 4820 83112 151668 2 57 29189608 36864000 0 130560 0 3912963 99.988 290979 1209 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:26:37] CVMFS is ok
[2025-10-13 19:26:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:26:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:26:37] Further information can be found at the LHC@home message board.
[2025-10-13 19:26:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:26:37] Checking for apptainer binary...
[2025-10-13 19:26:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:26:37] Running /usr/bin/apptainer --version
[2025-10-13 19:26:37] apptainer version 1.4.1-1.1
[2025-10-13 19:26:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:26:37] thA385
[2025-10-13 19:26:37] apptainer works
[2025-10-13 19:26:37] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:26:37] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:26:37] Starting ATLAS job with PandaID=6841068769
[2025-10-13 19:26:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:50:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:50:54] 2025-10-13 18:49:58,504 | INFO     | all data control threads have been joined
[2025-10-13 20:50:54] 2025-10-13 18:49:58,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:50:54] 2025-10-13 18:49:58,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:50:54] 2025-10-13 18:49:58,600 | INFO     | aborting loop
[2025-10-13 20:50:54] 2025-10-13 18:49:58,847 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:58,847 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:58,952 | INFO     | [job] control thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,203 | INFO     | [payload] control thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,274 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,510 | INFO     | [data] control thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,605 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,982 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:49:59,982 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:00,048 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:00,079 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:00,258 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:00,307 | INFO     | [job] validate thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:00,583 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:01,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:50:54] 2025-10-13 18:50:05,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:08,046 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:50:54] 2025-10-13 18:50:09,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:50:54] 2025-10-13 18:50:48,149 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:50:54] 2025-10-13 18:50:49,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791203886912)>', '<ExcThread(monitor, started 139790582281984)>']
[2025-10-13 20:50:54] 2025-10-13 18:50:50,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:50:54] 2025-10-13 18:50:50,108 | INFO     | [monitor] control thread has ended
[2025-10-13 20:50:54] 2025-10-13 18:50:54,176 | INFO     | all workflow threads have been joined
[2025-10-13 20:50:54] 2025-10-13 18:50:54,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:50:54] 2025-10-13 18:50:54,177 | INFO     | traces error code: 0
[2025-10-13 20:50:54] 2025-10-13 18:50:54,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:50:54] 2025-10-13 18:50:54,227 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:50:54] 2025-10-13 18:50:54,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:50:54] 2025-10-13 18:50:54,231 [wrapper] pilotpid: 3620606
[2025-10-13 20:50:54] 2025-10-13 18:50:54,234 [wrapper] Pilot exit status: 0
[2025-10-13 20:50:54] 2025-10-13 18:50:54,242 [wrapper] pandaids: 6841068769
[2025-10-13 20:50:54] 2025-10-13 18:50:54,260 [wrapper] cleanup supervisor_pilot 3640328 3620607
[2025-10-13 20:50:54] 2025-10-13 18:50:54,262 [wrapper] Test setup, not cleaning
[2025-10-13 20:50:54] 2025-10-13 18:50:54,265 [wrapper] apfmon messages muted
[2025-10-13 20:50:54] 2025-10-13 18:50:54,267 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:50:54] 2025-10-13 18:50:54,270 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:50:54]  *** Error codes and diagnostics ***
[2025-10-13 20:50:54]     "exeErrorCode": 0,
[2025-10-13 20:50:54]     "exeErrorDiag": "",
[2025-10-13 20:50:54]     "pilotErrorCode": 0,
[2025-10-13 20:50:54]     "pilotErrorDiag": "",
[2025-10-13 20:50:54]  *** Listing of results directory ***
[2025-10-13 20:50:54] total 408336
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:11 pilot3.tar.gz
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:19 queuedata.json
[2025-10-13 20:50:54] -rwx------ 1 boinc boinc     36292 Oct 13 02:20 runpilot2-wrapper.sh
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:50:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:26 run_atlas
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:26 job.xml
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc 219318402 Oct 13 19:26 EVNT.46676267._004687.pool.root.1
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc    569681 Oct 13 19:26 input.tar.gz
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:26 start_atlas.sh
[2025-10-13 20:50:54] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:26 shared
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:26 boinc_setup_complete
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      6446 Oct 13 19:26 init_data.xml
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:26 boinc_lockfile
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:26 pandaJob.out
[2025-10-13 20:50:54] -rw------- 1 boinc boinc    972791 Oct 13 19:26 agis_schedconf.cvmfs.json
[2025-10-13 20:50:54] -rw------- 1 boinc boinc   1560580 Oct 13 19:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:50:54] drwx------ 5 boinc boinc      4096 Oct 13 19:26 pilot3
[2025-10-13 20:50:54] -rw------- 1 boinc boinc        95 Oct 13 20:49 pilot_heartbeat.json
[2025-10-13 20:50:54] -rw------- 1 boinc boinc 192982963 Oct 13 20:49 HITS.46676269._093005.pool.root.1
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:49 boinc_task_state.xml
[2025-10-13 20:50:54] -rw------- 1 boinc boinc      1019 Oct 13 20:49 memory_monitor_summary.json
[2025-10-13 20:50:54] -rw------- 1 boinc boinc    245204 Oct 13 20:49 log.46676269._093005.job.log.tgz.1
[2025-10-13 20:50:54] -rw------- 1 boinc boinc      7756 Oct 13 20:49 heartbeat.json
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:50 wrapper_checkpoint.txt
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:50 boinc_mmap_file
[2025-10-13 20:50:54] -rw------- 1 boinc boinc      4628 Oct 13 20:50 pilotlog.txt
[2025-10-13 20:50:54] -rw------- 1 boinc boinc    732660 Oct 13 20:50 log.46676269._093005.job.log.1
[2025-10-13 20:50:54] -rw------- 1 boinc boinc       357 Oct 13 20:50 output.list
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:50 runtime_log
[2025-10-13 20:50:54] -rw------- 1 boinc boinc    993280 Oct 13 20:50 result.tar.gz
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      8777 Oct 13 20:50 runtime_log.err
[2025-10-13 20:50:54] -rw------- 1 boinc boinc       658 Oct 13 20:50 qABODmhTLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEMVMDmF7w83m.diag
[2025-10-13 20:50:54] -rw-r--r-- 1 boinc boinc      6401 Oct 13 20:50 stderr.txt
[2025-10-13 20:50:54] HITS file was successfully produced:
[2025-10-13 20:50:54] -rw------- 1 boinc boinc 192982963 Oct 13 20:49 shared/HITS.pool.root.1
[2025-10-13 20:50:54]  *** Contents of shared directory: ***
[2025-10-13 20:50:54] total 404196
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc 219318402 Oct 13 19:26 ATLAS.root_0
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc    569681 Oct 13 19:26 input.tar.gz
[2025-10-13 20:50:54] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:26 start_atlas.sh
[2025-10-13 20:50:54] -rw------- 1 boinc boinc 192982963 Oct 13 20:49 HITS.pool.root.1
[2025-10-13 20:50:54] -rw------- 1 boinc boinc    993280 Oct 13 20:50 result.tar.gz
20:50:55 (3616887): run_atlas exited; CPU time 14177.781109
20:50:55 (3616887): called boinc_finish(0)

</stderr_txt>
]]>

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