Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:08 (3990078): wrapper (7.7.26015): starting
20:46:08 (3990078): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 20:46:08] Arguments: --nthreads 4
[2025-10-13 20:46:08] Threads: 4
[2025-10-13 20:46:08] Checking for CVMFS
[2025-10-13 20:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:46:08] 2.9.2.0 1879657 6048 98644 151670 2 57 26908722 36864000 0 130560 0 5499758 99.992 208384 810 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 20:46:08] CVMFS is ok
[2025-10-13 20:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:46:08] Further information can be found at the LHC@home message board.
[2025-10-13 20:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:46:08] Checking for apptainer binary...
[2025-10-13 20:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:46:08] Running /usr/bin/apptainer --version
[2025-10-13 20:46:08] apptainer version 1.4.1-1.1
[2025-10-13 20:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:46:08] iaxoA393
[2025-10-13 20:46:08] apptainer works
[2025-10-13 20:46:08] Set ATHENA_PROC_NUMBER=4
[2025-10-13 20:46:08] Set ATHENA_CORE_NUMBER=4
[2025-10-13 20:46:08] Starting ATLAS job with PandaID=6841124227
[2025-10-13 20:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:54:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:54:35] VERSION="7 (Core)"
[2025-10-13 21:54:35] ID="centos"
[2025-10-13 21:54:35] ID_LIKE="rhel fedora"
[2025-10-13 21:54:35] VERSION_ID="7"
[2025-10-13 21:54:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:54:35] ANSI_COLOR="0;31"
[2025-10-13 21:54:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:54:35] HOME_URL="https://www.centos.org/"
[2025-10-13 21:54:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:54:35] 
[2025-10-13 21:54:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:54:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:54:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:54:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:54:35] 
[2025-10-13 21:54:35] 2025-10-13 19:54:04,766 | INFO     | ***************************************
[2025-10-13 21:54:35] 2025-10-13 19:54:05,269 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 21:54:35] 2025-10-13 19:54:05,284 | INFO     | sufficient remaining disk space (334754742272 B)
[2025-10-13 21:54:35] 2025-10-13 19:54:05,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:54:35] 2025-10-13 19:54:05,285 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:54:35] 2025-10-13 19:54:05,285 | INFO     | update_server=False
[2025-10-13 21:54:35] 2025-10-13 19:54:05,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:54:35] 2025-10-13 19:54:05,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-13 19:54:05,366 | INFO     | all payload control threads have been joined
[2025-10-13 21:54:35] 2025-10-13 19:54:05,467 | INFO     | all data control threads have been joined
[2025-10-13 21:54:35] 2025-10-13 19:54:05,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-13 19:54:05,924 | INFO     | all job control threads have been joined
[2025-10-13 21:54:35] 2025-10-13 19:54:06,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-13 19:54:06,290 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,291 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,307 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,327 | WARNING  | process 4000415 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 21:54:35] 2025-10-13 19:54:06,360 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:54:35] 2025-10-13 19:54:06,371 | INFO     | [payload] control thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,403 | INFO     | number of running child processes to parent process 4000415: 1
[2025-10-13 21:54:35] 2025-10-13 19:54:06,403 | INFO     | maximum number of monitored processes: 6
[2025-10-13 21:54:35] 2025-10-13 19:54:06,403 | INFO     | aborting job monitoring since job object (job id=6841124227) has expired
[2025-10-13 21:54:35] 2025-10-13 19:54:06,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-13 19:54:06,403 | INFO     | will abort loop
[2025-10-13 21:54:35] 2025-10-13 19:54:06,473 | INFO     | [data] control thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,889 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,930 | INFO     | [job] control thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:06,939 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:07,101 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:07,409 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:07,425 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:07,578 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:07,702 | INFO     | [job] validate thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:10,107 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:16,221 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:54:35] 2025-10-13 19:54:17,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:54:35] 2025-10-13 19:54:20,425 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:54:35] 2025-10-13 19:54:20,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455879075648)>', '<ExcThread(monitor, started 140454909679360)>']
[2025-10-13 21:54:35] 2025-10-13 19:54:25,732 | INFO     | all workflow threads have been joined
[2025-10-13 21:54:35] 2025-10-13 19:54:25,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:54:35] 2025-10-13 19:54:25,733 | INFO     | traces error code: 0
[2025-10-13 21:54:35] 2025-10-13 19:54:25,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | INFO     | PID=3993859 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:54:35] 2025-10-13 19:54:35,202 | INFO     | [monitor] control thread has ended
[2025-10-13 21:54:35] 2025-10-13 19:54:35,267 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:54:35] 2025-10-13 19:54:35,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:54:35] 2025-10-13 19:54:35,274 [wrapper] pilotpid: 3993859
[2025-10-13 21:54:35] 2025-10-13 19:54:35,277 [wrapper] Pilot exit status: 0
[2025-10-13 21:54:35] 2025-10-13 19:54:35,288 [wrapper] pandaids: 6841124227
[2025-10-13 21:54:35] 2025-10-13 19:54:35,308 [wrapper] cleanup supervisor_pilot 4010776 3993860
[2025-10-13 21:54:35] 2025-10-13 19:54:35,312 [wrapper] Test setup, not cleaning
[2025-10-13 21:54:35] 2025-10-13 19:54:35,316 [wrapper] apfmon messages muted
[2025-10-13 21:54:35] 2025-10-13 19:54:35,319 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:54:35] 2025-10-13 19:54:35,322 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:54:35]  *** Error codes and diagnostics ***
[2025-10-13 21:54:35]     "exeErrorCode": 0,
[2025-10-13 21:54:35]     "exeErrorDiag": "",
[2025-10-13 21:54:35]     "pilotErrorCode": 0,
[2025-10-13 21:54:35]     "pilotErrorDiag": "",
[2025-10-13 21:54:35]  *** Listing of results directory ***
[2025-10-13 21:54:35] total 404856
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-13 21:54:35] -rwx------ 1 boinc boinc     36292 Oct 13 03:27 runpilot2-wrapper.sh
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:27 queuedata.json
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:54:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 20:46 run_atlas
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 20:46 job.xml
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc 221119336 Oct 13 20:46 EVNT.46676267._001339.pool.root.1
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 20:46 input.tar.gz
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:46 start_atlas.sh
[2025-10-13 21:54:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 20:46 shared
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:46 boinc_setup_complete
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      6372 Oct 13 20:46 init_data.xml
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:46 boinc_lockfile
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 20:46 pandaJob.out
[2025-10-13 21:54:35] -rw------- 1 boinc boinc    972799 Oct 13 20:46 agis_schedconf.cvmfs.json
[2025-10-13 21:54:35] -rw------- 1 boinc boinc   1560580 Oct 13 20:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:54:35] drwx------ 5 boinc boinc      4096 Oct 13 20:46 pilot3
[2025-10-13 21:54:35] -rw------- 1 boinc boinc        95 Oct 13 21:53 pilot_heartbeat.json
[2025-10-13 21:54:35] -rw------- 1 boinc boinc 187805794 Oct 13 21:53 HITS.46676269._094135.pool.root.1
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:53 boinc_task_state.xml
[2025-10-13 21:54:35] -rw------- 1 boinc boinc      1024 Oct 13 21:53 memory_monitor_summary.json
[2025-10-13 21:54:35] -rw------- 1 boinc boinc    270181 Oct 13 21:53 log.46676269._094135.job.log.tgz.1
[2025-10-13 21:54:35] -rw------- 1 boinc boinc      7771 Oct 13 21:54 heartbeat.json
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:54 boinc_mmap_file
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:54 wrapper_checkpoint.txt
[2025-10-13 21:54:35] -rw------- 1 boinc boinc       747 Oct 13 21:54 pilotlog.txt
[2025-10-13 21:54:35] -rw------- 1 boinc boinc    607412 Oct 13 21:54 log.46676269._094135.job.log.1
[2025-10-13 21:54:35] -rw------- 1 boinc boinc       357 Oct 13 21:54 output.list
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:54 runtime_log
[2025-10-13 21:54:35] -rw------- 1 boinc boinc    901120 Oct 13 21:54 result.tar.gz
[2025-10-13 21:54:35] -rw------- 1 boinc boinc       660 Oct 13 21:54 t1KNDmSWMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqMmNDm5tWAIn.diag
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      8787 Oct 13 21:54 runtime_log.err
[2025-10-13 21:54:35] -rw-r--r-- 1 boinc boinc      9394 Oct 13 21:54 stderr.txt
[2025-10-13 21:54:35] HITS file was successfully produced:
[2025-10-13 21:54:35] -rw------- 1 boinc boinc 187805794 Oct 13 21:53 shared/HITS.pool.root.1
[2025-10-13 21:54:35]  *** Contents of shared directory: ***
[2025-10-13 21:54:35] total 400812
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc 221119336 Oct 13 20:46 ATLAS.root_0
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 20:46 input.tar.gz
[2025-10-13 21:54:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:46 start_atlas.sh
[2025-10-13 21:54:35] -rw------- 1 boinc boinc 187805794 Oct 13 21:53 HITS.pool.root.1
[2025-10-13 21:54:35] -rw------- 1 boinc boinc    901120 Oct 13 21:54 result.tar.gz
21:54:36 (3990078): run_atlas exited; CPU time 15245.285409
21:54:36 (3990078): called boinc_finish(0)

</stderr_txt>
]]>

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