Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:17:06 (180188): wrapper (7.7.26015): starting
01:17:06 (180188): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 01:17:06] Arguments: --nthreads 6
[2025-10-14 01:17:06] Threads: 6
[2025-10-14 01:17:06] Checking for CVMFS
[2025-10-14 01:17:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 01:17:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 01:17:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 01:17:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 01:17:07] 2.12.7.0 249871 7539 98668 151667 1 56 14081235 20971521 929 130560 0 12822432 99.996 260797 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-14 01:17:07] CVMFS is ok
[2025-10-14 01:17:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 01:17:07] Checking for apptainer binary...
[2025-10-14 01:17:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 01:17:07] Running /usr/bin/apptainer --version
[2025-10-14 01:17:07] apptainer version 1.4.0-1.el9
[2025-10-14 01:17:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 01:17:07] testio005
[2025-10-14 01:17:07] apptainer works
[2025-10-14 01:17:07] Set ATHENA_PROC_NUMBER=6
[2025-10-14 01:17:07] Set ATHENA_CORE_NUMBER=6
[2025-10-14 01:17:07] Starting ATLAS job with PandaID=6842457287
[2025-10-14 01:17:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 02:49:07]  *** The last 200 lines of the pilot log: ***
[2025-10-14 02:49:07] 2025-10-13 17:48:10,503 | INFO     | monitor loop #420: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:10,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:11,525 | INFO     | time since job start (5436s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:13,006 | INFO     | monitor loop #421: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:13,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:13,531 | INFO     | time since job start (5438s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:15,509 | INFO     | monitor loop #422: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:15,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:15,536 | INFO     | time since job start (5440s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:16,649 | INFO     | PID=183982 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 02:49:07] 2025-10-13 17:48:16,649 | INFO     | .. there are 2 such processes running
[2025-10-14 02:49:07] 2025-10-13 17:48:17,649 | INFO     | time since job start (5442s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:18,012 | INFO     | monitor loop #423: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:18,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:19,655 | INFO     | time since job start (5444s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:20,515 | INFO     | monitor loop #424: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:20,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:21,661 | INFO     | time since job start (5446s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:23,018 | INFO     | monitor loop #425: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:23,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:23,666 | INFO     | time since job start (5448s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:25,520 | INFO     | monitor loop #426: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:25,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:25,671 | INFO     | time since job start (5450s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:27,677 | INFO     | time since job start (5452s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:27,677 | INFO     | 5457s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-14 02:49:07] 2025-10-13 17:48:28,023 | INFO     | monitor loop #427: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:28,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:29,682 | INFO     | time since job start (5454s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:30,526 | INFO     | monitor loop #428: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:30,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:31,685 | INFO     | time since job start (5456s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:33,029 | INFO     | monitor loop #429: job 0:6842457287 is in state 'finished'
[2025-10-14 02:49:07] 2025-10-13 17:48:33,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 02:49:07] 2025-10-13 17:48:33,691 | INFO     | time since job start (5458s) is within the limit (172800.0s)
[2025-10-14 02:49:07] 2025-10-13 17:48:33,998 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 02:49:07] 2025-10-13 17:48:34,000 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3329.6994374999995
[2025-10-14 02:49:07] 2025-10-13 17:48:34,002 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6842457287/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,002 | INFO     | extracted standard info from prmon json
[2025-10-14 02:49:07] 2025-10-13 17:48:34,003 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 02:49:07] 2025-10-13 17:48:34,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 02:49:07] 2025-10-13 17:48:34,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 02:49:07] 2025-10-13 17:48:34,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 02:49:07] 2025-10-13 17:48:34,004 | INFO     | fitting pss+swap vs Time
[2025-10-14 02:49:07] 2025-10-13 17:48:34,004 | INFO     | sum of square deviations: 164765880.0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,004 | INFO     | sum of deviations: -10673203611.000002
[2025-10-14 02:49:07] 2025-10-13 17:48:34,004 | INFO     | mean x: 1760375024.0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,004 | INFO     | mean y: 2600609.4197530863
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | -- intersect: 114036167892.10605
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | intersect: 114036167892.10605
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | chi2: 0.08116022243383843
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | -- intersect: 114036167892.10605
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | current memory leak: -64.78 B/s (using 81 data points, chi2=0.08)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | could have reported an average CPU frequency of 3325 MHz (6 samples)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | ..............................
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . Timing measurements:
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . get job = 0 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . initial setup = 6 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . payload setup = 5 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . stage-in = 0 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,005 | INFO     | . payload execution = 5356 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,006 | INFO     | . stage-out = 0 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,006 | INFO     | . log creation = 0 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,006 | INFO     | ..............................
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | 
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | job summary report
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | --------------------------------------------------
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | PanDA job id: 6842457287
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | task id: 46676269
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | errors: (none)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 02:49:07] 2025-10-13 17:48:34,457 | INFO     | pilot state: finished 
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | transexitcode: 0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | exeerrorcode: 0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | exeerrordiag: 
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | exitcode: 0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | exitmsg: OK
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | cpuconsumptiontime: 29397 s
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | nevents: 400
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | neventsw: 0
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | pid: 190757
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | pgrp: 190757
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | corecount: 6
[2025-10-14 02:49:07] 2025-10-13 17:48:34,458 | INFO     | event service: False
[2025-10-14 02:49:07] 2025-10-13 17:48:34,459 | INFO     | sizes: {0: 2348807, 4: 2349069, 11: 2349097, 5365: 2375667, 5366: 2384665, 5369: 2384721, 5444: 2385043}
[2025-10-14 02:49:07] 2025-10-13 17:48:34,459 | INFO     | --------------------------------------------------
[2025-10-14 02:49:07] 2025-10-13 17:48:34,459 | INFO     | 
[2025-10-14 02:49:07] 2025-10-13 17:48:34,459 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-14 02:49:07] 2025-10-13 17:48:34,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,476 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 02:49:07] 2025-10-13 17:48:34,476 | INFO     | job 6842457287 has completed (purged errors)
[2025-10-14 02:49:07] 2025-10-13 17:48:34,476 | INFO     | overall cleanup function is called
[2025-10-14 02:49:07] 2025-10-13 17:48:35,482 | INFO     | --- collectZombieJob: --- 10, [190757]
[2025-10-14 02:49:07] 2025-10-13 17:48:35,482 | INFO     | zombie collector waiting for pid 190757
[2025-10-14 02:49:07] 2025-10-13 17:48:35,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 02:49:07] 2025-10-13 17:48:35,483 | INFO     | collected zombie processes
[2025-10-14 02:49:07] 2025-10-13 17:48:35,483 | INFO     | will attempt to kill all subprocesses of pid=190757
[2025-10-14 02:49:07] 2025-10-13 17:48:35,579 | INFO     | process IDs to be killed: [190757] (in reverse order)
[2025-10-14 02:49:07] 2025-10-13 17:48:35,616 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 02:49:07] 2025-10-13 17:48:35,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 02:49:07] 2025-10-13 17:48:35,620 | INFO     | did not find any defunct processes belonging to 190757
[2025-10-14 02:49:07] 2025-10-13 17:48:35,623 | INFO     | did not find any defunct processes belonging to 190757
[2025-10-14 02:49:07] 2025-10-13 17:48:35,623 | INFO     | ready for new job
[2025-10-14 02:49:07] 2025-10-13 17:48:35,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 02:49:07] 2025-10-13 17:48:35,625 | INFO     | ***************************************
[2025-10-14 02:49:07] 2025-10-13 17:48:35,625 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 02:49:07] 2025-10-13 17:48:35,625 | INFO     | ***************************************
[2025-10-14 02:49:07] 2025-10-13 17:48:35,625 | INFO     | 
[2025-10-14 02:49:07] 2025-10-13 17:48:35,626 | INFO     | architecture information:
[2025-10-14 02:49:07] 2025-10-13 17:48:35,627 | INFO     | executing command: cat /etc/os-release
[2025-10-14 02:49:07] 2025-10-13 17:48:35,638 | INFO     | cat /etc/os-release:
[2025-10-14 02:49:07] NAME="CentOS Linux"
[2025-10-14 02:49:07] VERSION="7 (Core)"
[2025-10-14 02:49:07] ID="centos"
[2025-10-14 02:49:07] ID_LIKE="rhel fedora"
[2025-10-14 02:49:07] VERSION_ID="7"
[2025-10-14 02:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 02:49:07] ANSI_COLOR="0;31"
[2025-10-14 02:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 02:49:07] HOME_URL="https://www.centos.org/"
[2025-10-14 02:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 02:49:07] 
[2025-10-14 02:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 02:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 02:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 02:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 02:49:07] 
[2025-10-14 02:49:07] 2025-10-13 17:48:35,638 | INFO     | ***************************************
[2025-10-14 02:49:07] 2025-10-13 17:48:36,141 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 02:49:07] 2025-10-13 17:48:36,152 | INFO     | sufficient remaining disk space (98259959808 B)
[2025-10-14 02:49:07] 2025-10-13 17:48:36,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 02:49:07] 2025-10-13 17:48:36,153 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 02:49:07] 2025-10-13 17:48:36,153 | INFO     | update_server=False
[2025-10-14 02:49:07] 2025-10-13 17:48:36,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 02:49:07] 2025-10-13 17:48:36,384 | INFO     | all job control threads have been joined
[2025-10-14 02:49:07] 2025-10-13 17:48:36,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:49:07] 2025-10-13 17:48:36,543 | INFO     | aborting loop
[2025-10-14 02:49:07] 2025-10-13 17:48:36,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 02:49:07] 2025-10-13 17:48:36,816 | INFO     | all data control threads have been joined
[2025-10-14 02:49:07] 2025-10-13 17:48:36,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 02:49:07] 2025-10-13 17:48:37,158 | INFO     | [job] retrieve thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,169 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,301 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,327 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,355 | INFO     | all payload control threads have been joined
[2025-10-14 02:49:07] 2025-10-13 17:48:37,389 | INFO     | [job] control thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,548 | INFO     | [job] job monitor thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,735 | INFO     | [payload] failed_post thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,818 | INFO     | [data] copytool_in thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:37,821 | INFO     | [data] control thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:38,278 | INFO     | [payload] validate_post thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:38,361 | INFO     | [payload] control thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:38,510 | INFO     | [job] validate thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:38,717 | INFO     | [data] copytool_out thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:39,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:49:07] 2025-10-13 17:48:40,077 | INFO     | [job] queue monitor thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:40,924 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:43,500 | INFO     | [monitor] cgroup control has ended
[2025-10-14 02:49:07] 2025-10-13 17:48:46,808 | INFO     | job.realtimelogging is not enabled
[2025-10-14 02:49:07] 2025-10-13 17:48:47,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 02:49:07] 2025-10-13 17:48:48,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909968799552)>', '<ExcThread(monitor, started 139909482403584)>']
[2025-10-14 02:49:07] 2025-10-13 17:48:53,749 | INFO     | all workflow threads have been joined
[2025-10-14 02:49:07] 2025-10-13 17:48:53,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 02:49:07] 2025-10-13 17:48:53,749 | INFO     | traces error code: 0
[2025-10-14 02:49:07] 2025-10-13 17:48:53,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | INFO     | PID=183982 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | INFO     | .. there are 2 such processes running
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 02:49:07] 2025-10-13 17:49:06,868 | INFO     | [monitor] control thread has ended
[2025-10-14 02:49:07] 2025-10-13 17:49:06,943 [wrapper] ==== pilot stdout END ====
[2025-10-14 02:49:07] 2025-10-13 17:49:06,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 02:49:07] 2025-10-13 17:49:06,947 [wrapper] pilotpid: 183982
[2025-10-14 02:49:07] 2025-10-13 17:49:06,949 [wrapper] Pilot exit status: 0
[2025-10-14 02:49:07] 2025-10-13 17:49:06,957 [wrapper] pandaids: 6842457287
[2025-10-14 02:49:07] 2025-10-13 17:49:06,987 [wrapper] cleanup supervisor_pilot  228034 183983
[2025-10-14 02:49:07] 2025-10-13 17:49:06,989 [wrapper] Test setup, not cleaning
[2025-10-14 02:49:07] 2025-10-13 17:49:06,991 [wrapper] apfmon messages muted
[2025-10-14 02:49:07] 2025-10-13 17:49:06,993 [wrapper] ==== wrapper stdout END ====
[2025-10-14 02:49:07] 2025-10-13 17:49:06,995 [wrapper] ==== wrapper stderr END ====
[2025-10-14 02:49:07]  *** Error codes and diagnostics ***
[2025-10-14 02:49:07]     "exeErrorCode": 0,
[2025-10-14 02:49:07]     "exeErrorDiag": "",
[2025-10-14 02:49:07]     "pilotErrorCode": 0,
[2025-10-14 02:49:07]     "pilotErrorDiag": "",
[2025-10-14 02:49:07]  *** Listing of results directory ***
[2025-10-14 02:49:07] total 417556
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc    557409 Oct 13 13:01 pilot3.tar.gz
[2025-10-14 02:49:07] -rwx------. 1 boinc boinc     36292 Oct 13 13:01 runpilot2-wrapper.sh
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc      5112 Oct 13 13:01 queuedata.json
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc       100 Oct 14 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 02:49:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 01:17 run_atlas
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc       105 Oct 14 01:17 job.xml
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc 222382289 Oct 14 01:17 EVNT.46676267._004445.pool.root.1
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc     15120 Oct 14 01:17 start_atlas.sh
[2025-10-14 02:49:07] drwxrwx--x. 2 boinc boinc        68 Oct 14 01:17 shared
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc    569682 Oct 14 01:17 input.tar.gz
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc      9362 Oct 14 01:17 init_data.xml
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc         0 Oct 14 01:17 boinc_lockfile
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc      2550 Oct 14 01:17 pandaJob.out
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc    972783 Oct 14 01:17 agis_schedconf.cvmfs.json
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc   1560580 Oct 14 01:17 agis_ddmendpoints.agis.ALL.json
[2025-10-14 02:49:07] drwx------. 5 boinc boinc      4096 Oct 14 01:17 pilot3
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc 199096104 Oct 14 02:46 HITS.46676269._096241.pool.root.1
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc       529 Oct 14 02:46 boinc_task_state.xml
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc      1018 Oct 14 02:47 memory_monitor_summary.json
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc    310399 Oct 14 02:47 log.46676269._096241.job.log.tgz.1
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc        95 Oct 14 02:48 pilot_heartbeat.json
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc      7756 Oct 14 02:48 heartbeat.json
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc      8192 Oct 14 02:48 boinc_mmap_file
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc        27 Oct 14 02:48 wrapper_checkpoint.txt
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc       821 Oct 14 02:49 pilotlog.txt
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc    795947 Oct 14 02:49 log.46676269._096241.job.log.1
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc       357 Oct 14 02:49 output.list
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc       620 Oct 14 02:49 runtime_log
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc   1126400 Oct 14 02:49 result.tar.gz
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc      8661 Oct 14 02:49 runtime_log.err
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc       641 Oct 14 02:49 lLLMDm4vOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4gmNDmHuP8Yn.diag
[2025-10-14 02:49:07] -rw-r--r--. 1 boinc boinc     21948 Oct 14 02:49 stderr.txt
[2025-10-14 02:49:07] HITS file was successfully produced:
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc 199096104 Oct 14 02:46 shared/HITS.pool.root.1
[2025-10-14 02:49:07]  *** Contents of shared directory: ***
[2025-10-14 02:49:07] total 413280
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc 222382289 Oct 14 01:17 ATLAS.root_0
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc     15120 Oct 14 01:17 start_atlas.sh
[2025-10-14 02:49:07] -rw-r--r--. 2 boinc boinc    569682 Oct 14 01:17 input.tar.gz
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc 199096104 Oct 14 02:46 HITS.pool.root.1
[2025-10-14 02:49:07] -rw-------. 1 boinc boinc   1126400 Oct 14 02:49 result.tar.gz
02:49:08 (180188): run_atlas exited; CPU time 29456.016796
02:49:08 (180188): called boinc_finish(0)

</stderr_txt>
]]>

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