Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:43:47 (14524): wrapper (7.7.26015): starting
04:43:47 (14524): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:43:47] Arguments: --nthreads 8
[2025-10-13 04:43:47] Threads: 8
[2025-10-13 04:43:47] Checking for CVMFS
[2025-10-13 04:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:43:48] 2.11.2.0 2932 202623 119040 151654 0 59 14306394 20275200 1 130560 1 73572133 99.973 10296709 13781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:43:48] CVMFS is ok
[2025-10-13 04:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:43:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:43:48] Further information can be found at the LHC@home message board.
[2025-10-13 04:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:43:48] Checking for apptainer binary...
[2025-10-13 04:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:43:48] Running /usr/bin/apptainer --version
[2025-10-13 04:43:48] apptainer version 1.3.2-1.el7
[2025-10-13 04:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:43:49] c-204-17.aglt2.org
[2025-10-13 04:43:49] apptainer works
[2025-10-13 04:43:49] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:43:49] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:43:49] Starting ATLAS job with PandaID=6841069811
[2025-10-13 04:43:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:52:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:52:25] 2025-10-13 10:51:24,702 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:52:25] 2025-10-13 10:51:24,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:52:25] 2025-10-13 10:51:24,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:52:25] 2025-10-13 10:51:24,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:52:25] 2025-10-13 10:51:24,706 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:52:25] 2025-10-13 10:51:24,707 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,707 | INFO     | sum of deviations: -6302420875.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,708 | INFO     | mean x: 1760348861.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,708 | INFO     | mean y: 2494065.792
[2025-10-13 06:52:25] 2025-10-13 10:51:24,708 | INFO     | -- intersect: 18322494443.68436
[2025-10-13 06:52:25] 2025-10-13 10:51:24,708 | INFO     | intersect: 18322494443.68436
[2025-10-13 06:52:25] 2025-10-13 10:51:24,708 | INFO     | chi2: 2.4271345794091204
[2025-10-13 06:52:25] 2025-10-13 10:51:24,709 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,709 | INFO     | sum of deviations: 2615191176.500001
[2025-10-13 06:52:25] 2025-10-13 10:51:24,709 | INFO     | mean x: 1760348708.5
[2025-10-13 06:52:25] 2025-10-13 10:51:24,709 | INFO     | mean y: 2512938.8583333334
[2025-10-13 06:52:25] 2025-10-13 10:51:24,710 | INFO     | -- intersect: -8589801197.950399
[2025-10-13 06:52:25] 2025-10-13 10:51:24,710 | INFO     | intersect: -8589801197.950399
[2025-10-13 06:52:25] 2025-10-13 10:51:24,710 | INFO     | chi2: 1.5865902092262671
[2025-10-13 06:52:25] 2025-10-13 10:51:24,710 | INFO     | current chi2=1.5865902092262671 (change=34.63113983516652 %)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,710 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,711 | INFO     | sum of deviations: 2759120280.0000005
[2025-10-13 06:52:25] 2025-10-13 10:51:24,711 | INFO     | mean x: 1760348556.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,711 | INFO     | mean y: 2513280.834782609
[2025-10-13 06:52:25] 2025-10-13 10:51:24,711 | INFO     | -- intersect: -10297320042.849737
[2025-10-13 06:52:25] 2025-10-13 10:51:24,711 | INFO     | intersect: -10297320042.849737
[2025-10-13 06:52:25] 2025-10-13 10:51:24,712 | INFO     | chi2: 1.588579190516146
[2025-10-13 06:52:25] 2025-10-13 10:51:24,712 | INFO     | current chi2=1.588579190516146 (change=-0.12536200452470683 %)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,712 | INFO     | right removable region: 114
[2025-10-13 06:52:25] 2025-10-13 10:51:24,712 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | sum of deviations: -24224032598.5
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | mean x: 1760349013.5
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | mean y: 2532465.3916666666
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | -- intersect: 79591564303.5251
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | intersect: 79591564303.5251
[2025-10-13 06:52:25] 2025-10-13 10:51:24,713 | INFO     | chi2: 1.0219364825426958
[2025-10-13 06:52:25] 2025-10-13 10:51:24,714 | INFO     | current chi2=1.0219364825426958 (change=57.8953515304667 %)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,714 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,714 | INFO     | sum of deviations: -24214808270.000004
[2025-10-13 06:52:25] 2025-10-13 10:51:24,714 | INFO     | mean x: 1760349166.0
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | mean y: 2532317.8521739133
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | -- intersect: 90396770430.4351
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | intersect: 90396770430.4351
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | chi2: 0.9979732156109745
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | current chi2=0.9979732156109745 (change=2.344888096381281 %)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,715 | INFO     | left removable region: 20
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | sum of square deviations: 257521107.5
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | sum of deviations: -8001128257.000001
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | mean x: 1760349135.5
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | mean y: 2536248.9574468085
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | -- intersect: 54696224649.75998
[2025-10-13 06:52:25] 2025-10-13 10:51:24,716 | INFO     | intersect: 54696224649.75998
[2025-10-13 06:52:25] 2025-10-13 10:51:24,717 | INFO     | chi2: 0.0915096362552737
[2025-10-13 06:52:25] 2025-10-13 10:51:24,717 | INFO     | -- intersect: 54696224649.75998
[2025-10-13 06:52:25] 2025-10-13 10:51:24,717 | INFO     | current memory leak: -31.07 B/s (using 94 data points, chi2=0.09)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,717 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-13 06:52:25] 2025-10-13 10:51:24,717 | INFO     | ..............................
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . Timing measurements:
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . get job = 0 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . initial setup = 2 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . payload setup = 8 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . stage-in = 0 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . payload execution = 7596 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . stage-out = 0 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | . log creation = 0 s
[2025-10-13 06:52:25] 2025-10-13 10:51:24,718 | INFO     | ..............................
[2025-10-13 06:52:25] 2025-10-13 10:51:25,204 | INFO     | 
[2025-10-13 06:52:25] 2025-10-13 10:51:25,204 | INFO     | job summary report
[2025-10-13 06:52:25] 2025-10-13 10:51:25,204 | INFO     | --------------------------------------------------
[2025-10-13 06:52:25] 2025-10-13 10:51:25,204 | INFO     | PanDA job id: 6841069811
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | task id: 46676269
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | errors: (none)
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | pilot state: finished 
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | transexitcode: 0
[2025-10-13 06:52:25] 2025-10-13 10:51:25,205 | INFO     | exeerrorcode: 0
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | exeerrordiag: 
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | exitcode: 0
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | exitmsg: OK
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | cpuconsumptiontime: 55825 s
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | nevents: 400
[2025-10-13 06:52:25] 2025-10-13 10:51:25,206 | INFO     | neventsw: 0
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | pid: 25814
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | pgrp: 25814
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | corecount: 8
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | event service: False
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | sizes: {0: 2348851, 6: 2349113, 11: 2349141, 7608: 2376712, 7611: 2385710, 7612: 2385766, 7620: 2386088}
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | --------------------------------------------------
[2025-10-13 06:52:25] 2025-10-13 10:51:25,207 | INFO     | 
[2025-10-13 06:52:25] 2025-10-13 10:51:25,208 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:52:25] 2025-10-13 10:51:25,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:52:25] 2025-10-13 10:51:25,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:52:25] 2025-10-13 10:51:25,240 | INFO     | job 6841069811 has completed (purged errors)
[2025-10-13 06:52:25] 2025-10-13 10:51:25,240 | INFO     | overall cleanup function is called
[2025-10-13 06:52:25] 2025-10-13 10:51:26,249 | INFO     | --- collectZombieJob: --- 10, [25814]
[2025-10-13 06:52:25] 2025-10-13 10:51:26,249 | INFO     | zombie collector waiting for pid 25814
[2025-10-13 06:52:25] 2025-10-13 10:51:26,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:52:25] 2025-10-13 10:51:26,249 | INFO     | collected zombie processes
[2025-10-13 06:52:25] 2025-10-13 10:51:26,249 | INFO     | will attempt to kill all subprocesses of pid=25814
[2025-10-13 06:52:25] 2025-10-13 10:51:26,339 | INFO     | process IDs to be killed: [25814] (in reverse order)
[2025-10-13 06:52:25] 2025-10-13 10:51:26,400 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:52:25] 2025-10-13 10:51:26,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:52:25] 2025-10-13 10:51:26,405 | INFO     | did not find any defunct processes belonging to 25814
[2025-10-13 06:52:25] 2025-10-13 10:51:26,409 | INFO     | did not find any defunct processes belonging to 25814
[2025-10-13 06:52:25] 2025-10-13 10:51:26,409 | INFO     | ready for new job
[2025-10-13 06:52:25] 2025-10-13 10:51:26,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:52:25] 2025-10-13 10:51:26,411 | INFO     | ***************************************
[2025-10-13 06:52:25] 2025-10-13 10:51:26,411 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:52:25] 2025-10-13 10:51:26,411 | INFO     | ***************************************
[2025-10-13 06:52:25] 2025-10-13 10:51:26,411 | INFO     | 
[2025-10-13 06:52:25] 2025-10-13 10:51:26,412 | INFO     | architecture information:
[2025-10-13 06:52:25] 2025-10-13 10:51:26,413 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:52:25] 2025-10-13 10:51:26,433 | INFO     | cat /etc/os-release:
[2025-10-13 06:52:25] NAME="CentOS Linux"
[2025-10-13 06:52:25] VERSION="7 (Core)"
[2025-10-13 06:52:25] ID="centos"
[2025-10-13 06:52:25] ID_LIKE="rhel fedora"
[2025-10-13 06:52:25] VERSION_ID="7"
[2025-10-13 06:52:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:52:25] ANSI_COLOR="0;31"
[2025-10-13 06:52:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:52:25] HOME_URL="https://www.centos.org/"
[2025-10-13 06:52:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:52:25] 
[2025-10-13 06:52:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:52:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:52:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:52:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:52:25] 
[2025-10-13 06:52:25] 2025-10-13 10:51:26,433 | INFO     | ***************************************
[2025-10-13 06:52:25] 2025-10-13 10:51:26,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:52:25] 2025-10-13 10:51:26,958 | INFO     | sufficient remaining disk space (18548260864 B)
[2025-10-13 06:52:25] 2025-10-13 10:51:26,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:52:25] 2025-10-13 10:51:26,958 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:52:25] 2025-10-13 10:51:26,959 | INFO     | update_server=False
[2025-10-13 06:52:25] 2025-10-13 10:51:26,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:52:25] 2025-10-13 10:51:26,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:52:25] 2025-10-13 10:51:26,959 | INFO     | aborting loop
[2025-10-13 06:52:25] 2025-10-13 10:51:26,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:52:25] 2025-10-13 10:51:27,063 | INFO     | all data control threads have been joined
[2025-10-13 06:52:25] 2025-10-13 10:51:27,082 | INFO     | all payload control threads have been joined
[2025-10-13 06:52:25] 2025-10-13 10:51:27,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:52:25] 2025-10-13 10:51:27,964 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:27,965 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,039 | INFO     | [job] validate thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,069 | INFO     | [data] control thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,088 | INFO     | [payload] control thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,209 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,269 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,342 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,349 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,388 | INFO     | all job control threads have been joined
[2025-10-13 06:52:25] 2025-10-13 10:51:28,850 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:28,961 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:29,356 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:29,389 | INFO     | [job] control thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:29,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:52:25] 2025-10-13 10:51:30,828 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:31,448 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:52:25] 2025-10-13 10:51:56,512 | INFO     | PID=19402 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:52:25] 2025-10-13 10:51:56,513 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:52:25] 2025-10-13 10:51:56,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:52:25] 2025-10-13 10:51:56,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:52:25] 2025-10-13 10:52:19,127 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:52:25] 2025-10-13 10:52:19,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081834587968)>', '<ExcThread(monitor, started 140080979089152)>']
[2025-10-13 06:52:25] 2025-10-13 10:52:20,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:52:25] 2025-10-13 10:52:20,632 | INFO     | [monitor] control thread has ended
[2025-10-13 06:52:25] 2025-10-13 10:52:24,720 | INFO     | all workflow threads have been joined
[2025-10-13 06:52:25] 2025-10-13 10:52:24,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:52:25] 2025-10-13 10:52:24,721 | INFO     | traces error code: 0
[2025-10-13 06:52:25] 2025-10-13 10:52:24,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:52:25] 2025-10-13 10:52:24,829 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:52:25] 2025-10-13 10:52:24,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:52:25] 2025-10-13 10:52:24,839 [wrapper] pilotpid: 19402
[2025-10-13 06:52:25] 2025-10-13 10:52:24,844 [wrapper] Pilot exit status: 0
[2025-10-13 06:52:25] 2025-10-13 10:52:24,863 [wrapper] pandaids: 6841069811
[2025-10-13 06:52:25] 2025-10-13 10:52:24,916 [wrapper] cleanup supervisor_pilot 13935 19403
[2025-10-13 06:52:25] 2025-10-13 10:52:24,921 [wrapper] Test setup, not cleaning
[2025-10-13 06:52:25] 2025-10-13 10:52:24,926 [wrapper] apfmon messages muted
[2025-10-13 06:52:25] 2025-10-13 10:52:24,931 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:52:25] 2025-10-13 10:52:24,936 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:52:25]  *** Error codes and diagnostics ***
[2025-10-13 06:52:25]     "exeErrorCode": 0,
[2025-10-13 06:52:25]     "exeErrorDiag": "",
[2025-10-13 06:52:25]     "pilotErrorCode": 0,
[2025-10-13 06:52:25]     "pilotErrorDiag": "",
[2025-10-13 06:52:25]  *** Listing of results directory ***
[2025-10-13 06:52:25] total 412332
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:06 queuedata.json
[2025-10-13 06:52:25] -rwx------ 1 boincer umatlas     36292 Oct 12 21:07 runpilot2-wrapper.sh
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:52:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:43 run_atlas
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:43 job.xml
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas 220791694 Oct 13 04:43 EVNT.46676267._004721.pool.root.1
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:43 start_atlas.sh
[2025-10-13 06:52:25] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:43 shared
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 04:43 input.tar.gz
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:43 boinc_lockfile
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas      2547 Oct 13 04:43 pandaJob.out
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas    972857 Oct 13 04:44 agis_schedconf.cvmfs.json
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas   1560580 Oct 13 04:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:52:25] drwx------ 5 boincer umatlas      4096 Oct 13 04:44 pilot3
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 06:47 init_data.xml
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas 194684565 Oct 13 06:50 HITS.46676269._093851.pool.root.1
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:50 boinc_task_state.xml
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas      1051 Oct 13 06:51 memory_monitor_summary.json
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas    352952 Oct 13 06:51 log.46676269._093851.job.log.tgz.1
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas      7849 Oct 13 06:51 heartbeat.json
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas        95 Oct 13 06:51 pilot_heartbeat.json
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:52 wrapper_checkpoint.txt
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:52 boinc_mmap_file
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas      4746 Oct 13 06:52 pilotlog.txt
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas   1073036 Oct 13 06:52 log.46676269._093851.job.log.1
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas       357 Oct 13 06:52 output.list
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:52 runtime_log
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas   1443840 Oct 13 06:52 result.tar.gz
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas       659 Oct 13 06:52 xigKDmsCMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLQVMDmu6Z00m.diag
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 06:52 runtime_log.err
[2025-10-13 06:52:25] -rw-r--r-- 1 boincer umatlas     20846 Oct 13 06:52 stderr.txt
[2025-10-13 06:52:25] HITS file was successfully produced:
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas 194684565 Oct 13 06:50 shared/HITS.pool.root.1
[2025-10-13 06:52:25]  *** Contents of shared directory: ***
[2025-10-13 06:52:25] total 407736
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas 220791694 Oct 13 04:43 ATLAS.root_0
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:43 start_atlas.sh
[2025-10-13 06:52:25] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 04:43 input.tar.gz
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas 194684565 Oct 13 06:50 HITS.pool.root.1
[2025-10-13 06:52:25] -rw------- 1 boincer umatlas   1443840 Oct 13 06:52 result.tar.gz
06:52:26 (14524): run_atlas exited; CPU time 55764.516245
06:52:26 (14524): called boinc_finish(0)

</stderr_txt>
]]>

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