Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:54 (2721244): wrapper (7.7.26015): starting
04:55:54 (2721244): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:55:54] Arguments: --nthreads 8
[2025-10-13 04:55:54] Threads: 8
[2025-10-13 04:55:54] Checking for CVMFS
[2025-10-13 04:55:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:55:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:55:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:55:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:55:56] 2.13.2.0 8406 37733 90620 151654 0 517 30434120 40960001 25974 16776704 0 237242407 99.855 82344235 48753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:55:56] CVMFS is ok
[2025-10-13 04:55:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:55:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:55:56] Further information can be found at the LHC@home message board.
[2025-10-13 04:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:55:56] Checking for apptainer binary...
[2025-10-13 04:55:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:55:56] Running /usr/bin/apptainer --version
[2025-10-13 04:55:56] apptainer version 1.4.3-1.el9
[2025-10-13 04:55:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:55:56] c-208-37.aglt2.org
[2025-10-13 04:55:56] apptainer works
[2025-10-13 04:55:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:55:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:55:56] Starting ATLAS job with PandaID=6841069066
[2025-10-13 04:55:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:11:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:11:41] 2025-10-13 12:10:58,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:11:41] 2025-10-13 12:10:58,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:11:41] 2025-10-13 12:10:58,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:11:41] 2025-10-13 12:10:58,918 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:11:41] 2025-10-13 12:10:58,918 | INFO     | sum of square deviations: 2060343747.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,919 | INFO     | sum of deviations: 95639760943.5
[2025-10-13 08:11:41] 2025-10-13 12:10:58,923 | INFO     | mean x: 1760351713.5
[2025-10-13 08:11:41] 2025-10-13 12:10:58,923 | INFO     | mean y: 2379340.260638298
[2025-10-13 08:11:41] 2025-10-13 12:10:58,923 | INFO     | -- intersect: -81711954639.57336
[2025-10-13 08:11:41] 2025-10-13 12:10:58,923 | INFO     | intersect: -81711954639.57336
[2025-10-13 08:11:41] 2025-10-13 12:10:58,923 | INFO     | chi2: 6.755282811579164
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | sum of square deviations: 1900284932.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | sum of deviations: 104477483674.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | mean x: 1760351561.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | mean y: 2387520.5519125685
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | -- intersect: -96781572809.70761
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | intersect: -96781572809.70761
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | chi2: 6.10751490926059
[2025-10-13 08:11:41] 2025-10-13 12:10:58,924 | INFO     | current chi2=6.10751490926059 (change=9.589056748419798 %)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | right removable region: 182
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | sum of square deviations: 1900284932.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | sum of deviations: 35097692609.99999
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | mean x: 1760351866.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | mean y: 2436968.7540983604
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | -- intersect: -32510733892.039684
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | intersect: -32510733892.039684
[2025-10-13 08:11:41] 2025-10-13 12:10:58,925 | INFO     | chi2: 2.360364056480903
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | current chi2=2.360364056480903 (change=65.05898979632613 %)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | sum of square deviations: 1748737904.5
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | sum of deviations: 1345175538.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | mean x: 1760352018.5
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | mean y: 2470745.04494382
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | -- intersect: -1351638677.219897
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | intersect: -1351638677.219897
[2025-10-13 08:11:41] 2025-10-13 12:10:58,926 | INFO     | chi2: 0.9363390431126422
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | current chi2=0.9363390431126422 (change=60.330736246312696 %)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | sum of deviations: -9330174663.000002
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | mean x: 1760352171.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | mean y: 2482070.156069364
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | -- intersect: 10232752446.017138
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | intersect: 10232752446.017138
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | chi2: 0.8004047631000316
[2025-10-13 08:11:41] 2025-10-13 12:10:58,927 | INFO     | current chi2=0.8004047631000316 (change=14.517634505630411 %)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | left removable region: 30
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | sum of deviations: -3869841952.0
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | mean x: 1760352445.5
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | mean y: 2500254.6184210526
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | -- intersect: 6258582741.457375
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | intersect: 6258582741.457375
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | chi2: 0.006467937744927601
[2025-10-13 08:11:41] 2025-10-13 12:10:58,928 | INFO     | -- intersect: 6258582741.457375
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | current memory leak: -3.55 B/s (using 152 data points, chi2=0.01)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | could have reported an average CPU frequency of 3677 MHz (10 samples)
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | ..............................
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | . Timing measurements:
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | . get job = 0 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,929 | INFO     | . initial setup = 9 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | . payload setup = 62 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | . stage-in = 0 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | . payload execution = 11448 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | . stage-out = 4 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | . log creation = 0 s
[2025-10-13 08:11:41] 2025-10-13 12:10:58,931 | INFO     | ..............................
[2025-10-13 08:11:41] 2025-10-13 12:10:59,204 | INFO     | 
[2025-10-13 08:11:41] 2025-10-13 12:10:59,204 | INFO     | job summary report
[2025-10-13 08:11:41] 2025-10-13 12:10:59,204 | INFO     | --------------------------------------------------
[2025-10-13 08:11:41] 2025-10-13 12:10:59,204 | INFO     | PanDA job id: 6841069066
[2025-10-13 08:11:41] 2025-10-13 12:10:59,204 | INFO     | task id: 46676269
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | errors: (none)
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | pilot state: finished 
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | transexitcode: 0
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | exeerrorcode: 0
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | exeerrordiag: 
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | exitcode: 0
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | exitmsg: OK
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | cpuconsumptiontime: 24952 s
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | nevents: 400
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | neventsw: 0
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | pid: 2737612
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | pgrp: 2737612
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | corecount: 8
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | event service: False
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 23: 2348862, 34: 2348890, 37: 2349180, 44: 2349336, 11514: 2378824, 11515: 2378823, 11520: 2387877, 11522: 2387933, 11
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | --------------------------------------------------
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | 
[2025-10-13 08:11:41] 2025-10-13 12:10:59,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 08:11:41] 2025-10-13 12:10:59,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | job 6841069066 has completed (purged errors)
[2025-10-13 08:11:41] 2025-10-13 12:10:59,273 | INFO     | overall cleanup function is called
[2025-10-13 08:11:41] 2025-10-13 12:11:00,287 | INFO     | --- collectZombieJob: --- 10, [2737612]
[2025-10-13 08:11:41] 2025-10-13 12:11:00,288 | INFO     | zombie collector waiting for pid 2737612
[2025-10-13 08:11:41] 2025-10-13 12:11:00,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:11:41] 2025-10-13 12:11:00,288 | INFO     | collected zombie processes
[2025-10-13 08:11:41] 2025-10-13 12:11:00,288 | INFO     | will attempt to kill all subprocesses of pid=2737612
[2025-10-13 08:11:41] 2025-10-13 12:11:01,205 | INFO     | process IDs to be killed: [2737612] (in reverse order)
[2025-10-13 08:11:41] 2025-10-13 12:11:01,753 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:11:41] 2025-10-13 12:11:01,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:11:41] 2025-10-13 12:11:01,840 | INFO     | did not find any defunct processes belonging to 2737612
[2025-10-13 08:11:41] 2025-10-13 12:11:01,940 | INFO     | did not find any defunct processes belonging to 2737612
[2025-10-13 08:11:41] 2025-10-13 12:11:01,940 | INFO     | ready for new job
[2025-10-13 08:11:41] 2025-10-13 12:11:01,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:11:41] 2025-10-13 12:11:01,958 | INFO     | ***************************************
[2025-10-13 08:11:41] 2025-10-13 12:11:01,958 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:11:41] 2025-10-13 12:11:01,958 | INFO     | ***************************************
[2025-10-13 08:11:41] 2025-10-13 12:11:01,958 | INFO     | 
[2025-10-13 08:11:41] 2025-10-13 12:11:01,979 | INFO     | architecture information:
[2025-10-13 08:11:41] 2025-10-13 12:11:01,992 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:11:41] 2025-10-13 12:11:02,101 | INFO     | cat /etc/os-release:
[2025-10-13 08:11:41] NAME="CentOS Linux"
[2025-10-13 08:11:41] VERSION="7 (Core)"
[2025-10-13 08:11:41] ID="centos"
[2025-10-13 08:11:41] ID_LIKE="rhel fedora"
[2025-10-13 08:11:41] VERSION_ID="7"
[2025-10-13 08:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:11:41] ANSI_COLOR="0;31"
[2025-10-13 08:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:11:41] HOME_URL="https://www.centos.org/"
[2025-10-13 08:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:11:41] 
[2025-10-13 08:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:11:41] 
[2025-10-13 08:11:41] 2025-10-13 12:11:02,101 | INFO     | ***************************************
[2025-10-13 08:11:41] 2025-10-13 12:11:02,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 08:11:41] 2025-10-13 12:11:02,657 | INFO     | sufficient remaining disk space (171332075520 B)
[2025-10-13 08:11:41] 2025-10-13 12:11:02,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:11:41] 2025-10-13 12:11:02,657 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:11:41] 2025-10-13 12:11:02,657 | INFO     | update_server=False
[2025-10-13 08:11:41] 2025-10-13 12:11:02,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:11:41] 2025-10-13 12:11:02,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:11:41] 2025-10-13 12:11:02,659 | INFO     | aborting loop
[2025-10-13 08:11:41] 2025-10-13 12:11:03,000 | INFO     | all job control threads have been joined
[2025-10-13 08:11:41] 2025-10-13 12:11:03,488 | INFO     | all data control threads have been joined
[2025-10-13 08:11:41] 2025-10-13 12:11:03,533 | INFO     | all payload control threads have been joined
[2025-10-13 08:11:41] 2025-10-13 12:11:03,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:11:41] 2025-10-13 12:11:03,663 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:03,669 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,006 | INFO     | [job] control thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:11:41] 2025-10-13 12:11:04,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,494 | INFO     | [data] control thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,538 | INFO     | [payload] control thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,784 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:04,873 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,001 | INFO     | [job] validate thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,049 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,050 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,120 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,201 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,226 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,545 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:05,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:11:41] 2025-10-13 12:11:09,927 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:11:41] 2025-10-13 12:11:32,445 | INFO     | PID=2727520 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:11:41] 2025-10-13 12:11:32,445 | INFO     | .. there are 20 such processes running
[2025-10-13 08:11:41] 2025-10-13 12:11:32,445 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:11:41] 2025-10-13 12:11:32,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:11:41] 2025-10-13 12:11:32,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:11:41] 2025-10-13 12:11:35,358 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:11:41] 2025-10-13 12:11:35,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213930334016)>', '<ExcThread(monitor, started 140213301016320)>']
[2025-10-13 08:11:41] 2025-10-13 12:11:36,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:11:41] 2025-10-13 12:11:36,469 | INFO     | [monitor] control thread has ended
[2025-10-13 08:11:41] 2025-10-13 12:11:40,635 | INFO     | all workflow threads have been joined
[2025-10-13 08:11:41] 2025-10-13 12:11:40,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:11:41] 2025-10-13 12:11:40,636 | INFO     | traces error code: 0
[2025-10-13 08:11:41] 2025-10-13 12:11:40,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:11:41] 2025-10-13 12:11:41,165 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:11:41] 2025-10-13 12:11:41,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:11:41] 2025-10-13 12:11:41,286 [wrapper] pilotpid: 2727520
[2025-10-13 08:11:41] 2025-10-13 12:11:41,331 [wrapper] Pilot exit status: 0
[2025-10-13 08:11:41] 2025-10-13 12:11:41,451 [wrapper] pandaids: 6841069066
[2025-10-13 08:11:41] 2025-10-13 12:11:41,551 [wrapper] cleanup supervisor_pilot 3314667 2727521
[2025-10-13 08:11:41] 2025-10-13 12:11:41,556 [wrapper] Test setup, not cleaning
[2025-10-13 08:11:41] 2025-10-13 12:11:41,558 [wrapper] apfmon messages muted
[2025-10-13 08:11:41] 2025-10-13 12:11:41,573 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:11:41] 2025-10-13 12:11:41,575 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:11:41]  *** Error codes and diagnostics ***
[2025-10-13 08:11:41]     "exeErrorCode": 0,
[2025-10-13 08:11:41]     "exeErrorDiag": "",
[2025-10-13 08:11:41]     "pilotErrorCode": 0,
[2025-10-13 08:11:41]     "pilotErrorDiag": "",
[2025-10-13 08:11:41]  *** Listing of results directory ***
[2025-10-13 08:11:41] total 406308
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:35 queuedata.json
[2025-10-13 08:11:41] -rwx------. 1 boincer umatlas     36292 Oct 12 20:35 runpilot2-wrapper.sh
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:11:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:55 run_atlas
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:55 job.xml
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas 219991849 Oct 13 04:55 EVNT.46676267._004697.pool.root.1
[2025-10-13 08:11:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:55 shared
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:55 input.tar.gz
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:55 start_atlas.sh
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:55 boinc_lockfile
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 04:55 pandaJob.out
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas    972857 Oct 13 04:57 agis_schedconf.cvmfs.json
[2025-10-13 08:11:41] drwx------. 5 boincer umatlas      4096 Oct 13 04:57 pilot3
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas 188268903 Oct 13 08:09 HITS.46676269._093275.pool.root.1
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:09 boinc_task_state.xml
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas      1059 Oct 13 08:10 memory_monitor_summary.json
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas    437243 Oct 13 08:10 log.46676269._093275.job.log.tgz.1
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas        95 Oct 13 08:10 pilot_heartbeat.json
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas      7174 Oct 13 08:10 init_data.xml
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas      7827 Oct 13 08:10 heartbeat.json
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:11 boinc_mmap_file
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:11 wrapper_checkpoint.txt
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas      4825 Oct 13 08:11 pilotlog.txt
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas   1514109 Oct 13 08:11 log.46676269._093275.job.log.1
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas       357 Oct 13 08:11 output.list
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:11 runtime_log
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas   1966080 Oct 13 08:11 result.tar.gz
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 08:11 runtime_log.err
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas       660 Oct 13 08:11 gt1LDmhiLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWOVMDmNg7AWm.diag
[2025-10-13 08:11:41] -rw-r--r--. 1 boincer umatlas     20936 Oct 13 08:11 stderr.txt
[2025-10-13 08:11:41] HITS file was successfully produced:
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas 188268903 Oct 13 08:09 shared/HITS.pool.root.1
[2025-10-13 08:11:41]  *** Contents of shared directory: ***
[2025-10-13 08:11:41] total 401200
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas 219991849 Oct 13 04:55 ATLAS.root_0
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:55 input.tar.gz
[2025-10-13 08:11:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:55 start_atlas.sh
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas 188268903 Oct 13 08:09 HITS.pool.root.1
[2025-10-13 08:11:41] -rw-------. 1 boincer umatlas   1966080 Oct 13 08:11 result.tar.gz
08:11:43 (2721244): run_atlas exited; CPU time 25238.289771
08:11:43 (2721244): called boinc_finish(0)

</stderr_txt>
]]>

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