Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:54:09 (1392111): wrapper (7.7.26015): starting
04:54:09 (1392111): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:54:09] Arguments: --nthreads 8
[2025-10-13 04:54:09] Threads: 8
[2025-10-13 04:54:09] Checking for CVMFS
[2025-10-13 04:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:54:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:54:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:54:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:54:10] 2.13.2.0 1660786 130469 471764 151654 3 609 32717160 32935936 23457 16776704 16 256978379 99.580 284335949 22204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:54:10] CVMFS is ok
[2025-10-13 04:54:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:54:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:54:10] Further information can be found at the LHC@home message board.
[2025-10-13 04:54:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:54:10] Checking for apptainer binary...
[2025-10-13 04:54:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:54:10] Running /usr/bin/apptainer --version
[2025-10-13 04:54:10] apptainer version 1.4.3-1.el9
[2025-10-13 04:54:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:54:10] c7-11-16.aglt2.org
[2025-10-13 04:54:10] apptainer works
[2025-10-13 04:54:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:54:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:54:11] Starting ATLAS job with PandaID=6841070185
[2025-10-13 04:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:53:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:53:52] 2025-10-13 11:52:48,894 | INFO     | time since job start (10701s) is within the limit (172800.0s)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,308 | INFO     | PID=1397847 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,308 | INFO     | .. there are 25 such processes running
[2025-10-13 07:53:52] 2025-10-13 11:52:50,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:53:52] 2025-10-13 11:52:50,511 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3249.2514218750007
[2025-10-13 07:53:52] 2025-10-13 11:52:50,537 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6841070185/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,539 | INFO     | extracted standard info from prmon json
[2025-10-13 07:53:52] 2025-10-13 11:52:50,539 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:53:52] 2025-10-13 11:52:50,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:53:52] 2025-10-13 11:52:50,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:53:52] 2025-10-13 11:52:50,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:53:52] 2025-10-13 11:52:50,543 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:53:52] 2025-10-13 11:52:50,544 | INFO     | sum of square deviations: 1661784706.8800015
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | sum of deviations: 19782861145.96
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | mean x: 1760351010.08
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | mean y: 2111386.7885714285
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | -- intersect: -20954140922.180225
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | intersect: -20954140922.180225
[2025-10-13 07:53:52] 2025-10-13 11:52:50,545 | INFO     | chi2: 1.2925634766672274
[2025-10-13 07:53:52] 2025-10-13 11:52:50,546 | INFO     | sum of square deviations: 1523377079.347067
[2025-10-13 07:53:52] 2025-10-13 11:52:50,546 | INFO     | sum of deviations: 18256485647.211765
[2025-10-13 07:53:52] 2025-10-13 11:52:50,546 | INFO     | mean x: 1760350857.5823529
[2025-10-13 07:53:52] 2025-10-13 11:52:50,546 | INFO     | mean y: 2109701.2705882355
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | -- intersect: -21094321774.04326
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | intersect: -21094321774.04326
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | chi2: 1.2919736753817295
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | current chi2=1.2919736753817295 (change=0.04563035364566079 %)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | right removable region: 169
[2025-10-13 07:53:52] 2025-10-13 11:52:50,547 | INFO     | sum of square deviations: 1523368539.347067
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | sum of deviations: 209232830.96470457
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | mean x: 1760351162.5823529
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | mean y: 2132665.788235294
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | -- intersect: -239649442.56289428
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | intersect: -239649442.56289428
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | chi2: 0.08132653650189821
[2025-10-13 07:53:52] 2025-10-13 11:52:50,548 | INFO     | current chi2=0.08132653650189821 (change=93.70812049311556 %)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,549 | INFO     | sum of square deviations: 1392859496.8121254
[2025-10-13 07:53:52] 2025-10-13 11:52:50,549 | INFO     | sum of deviations: 632834246.38182
[2025-10-13 07:53:52] 2025-10-13 11:52:50,549 | INFO     | mean x: 1760351315.0848484
[2025-10-13 07:53:52] 2025-10-13 11:52:50,549 | INFO     | mean y: 2132149.4727272727
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | -- intersect: -797668979.355149
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | intersect: -797668979.355149
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | chi2: 0.0781916030450555
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | current chi2=0.0781916030450555 (change=3.8547485134443638 %)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | left removable region: 20
[2025-10-13 07:53:52] 2025-10-13 11:52:50,550 | INFO     | sum of square deviations: 1025667800.6845632
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | sum of deviations: 2595787326.9463086
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | mean x: 1760351437.0939598
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | mean y: 2126159.7181208055
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | -- intersect: -4453018038.364724
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | intersect: -4453018038.364724
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | chi2: 0.06040692916653651
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | -- intersect: -4453018038.364724
[2025-10-13 07:53:52] 2025-10-13 11:52:50,551 | INFO     | current memory leak: 2.53 B/s (using 149 data points, chi2=0.06)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,552 | INFO     | could have reported an average CPU frequency of 3249 MHz (9 samples)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,552 | INFO     | ..............................
[2025-10-13 07:53:52] 2025-10-13 11:52:50,552 | INFO     | . Timing measurements:
[2025-10-13 07:53:52] 2025-10-13 11:52:50,552 | INFO     | . get job = 0 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,552 | INFO     | . initial setup = 2 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | . payload setup = 8 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | . stage-in = 0 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | . payload execution = 10666 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | . stage-out = 0 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | . log creation = 0 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,553 | INFO     | ..............................
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | job summary report
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | --------------------------------------------------
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | PanDA job id: 6841070185
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | task id: 46676269
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | errors: (none)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | pilot state: finished 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | transexitcode: 0
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | exeerrorcode: 0
[2025-10-13 07:53:52] 2025-10-13 11:52:50,819 | INFO     | exeerrordiag: 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | exitcode: 0
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | exitmsg: OK
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | cpuconsumptiontime: 32449 s
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | nevents: 400
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | neventsw: 0
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | pid: 1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | pgrp: 1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | corecount: 8
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | event service: False
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 10678: 2378266, 10679: 2387320, 10686: 2387522}
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | --------------------------------------------------
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | 
[2025-10-13 07:53:52] 2025-10-13 11:52:50,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | job 6841070185 has completed (purged errors)
[2025-10-13 07:53:52] 2025-10-13 11:52:50,843 | INFO     | overall cleanup function is called
[2025-10-13 07:53:52] 2025-10-13 11:52:51,852 | INFO     | --- collectZombieJob: --- 10, [1404593]
[2025-10-13 07:53:52] 2025-10-13 11:52:51,852 | INFO     | zombie collector waiting for pid 1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:51,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:53:52] 2025-10-13 11:52:51,852 | INFO     | collected zombie processes
[2025-10-13 07:53:52] 2025-10-13 11:52:51,852 | INFO     | will attempt to kill all subprocesses of pid=1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:52,156 | INFO     | process IDs to be killed: [1404593] (in reverse order)
[2025-10-13 07:53:52] 2025-10-13 11:52:52,279 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:53:52] 2025-10-13 11:52:52,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:53:52] 2025-10-13 11:52:52,293 | INFO     | did not find any defunct processes belonging to 1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:52,306 | INFO     | did not find any defunct processes belonging to 1404593
[2025-10-13 07:53:52] 2025-10-13 11:52:52,306 | INFO     | ready for new job
[2025-10-13 07:53:52] 2025-10-13 11:52:52,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:53:52] 2025-10-13 11:52:52,308 | INFO     | ***************************************
[2025-10-13 07:53:52] 2025-10-13 11:52:52,308 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:53:52] 2025-10-13 11:52:52,308 | INFO     | ***************************************
[2025-10-13 07:53:52] 2025-10-13 11:52:52,308 | INFO     | 
[2025-10-13 07:53:52] 2025-10-13 11:52:52,325 | INFO     | architecture information:
[2025-10-13 07:53:52] 2025-10-13 11:52:52,326 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:53:52] 2025-10-13 11:52:52,344 | INFO     | cat /etc/os-release:
[2025-10-13 07:53:52] NAME="CentOS Linux"
[2025-10-13 07:53:52] VERSION="7 (Core)"
[2025-10-13 07:53:52] ID="centos"
[2025-10-13 07:53:52] ID_LIKE="rhel fedora"
[2025-10-13 07:53:52] VERSION_ID="7"
[2025-10-13 07:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:53:52] ANSI_COLOR="0;31"
[2025-10-13 07:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:53:52] HOME_URL="https://www.centos.org/"
[2025-10-13 07:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:53:52] 
[2025-10-13 07:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:53:52] 
[2025-10-13 07:53:52] 2025-10-13 11:52:52,346 | INFO     | ***************************************
[2025-10-13 07:53:52] 2025-10-13 11:52:52,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | INFO     | sufficient remaining disk space (96645152768 B)
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | INFO     | update_server=False
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:53:52] 2025-10-13 11:52:52,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:53:52] 2025-10-13 11:52:52,871 | INFO     | aborting loop
[2025-10-13 07:53:52] 2025-10-13 11:52:52,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:53:52] 2025-10-13 11:52:53,083 | INFO     | all payload control threads have been joined
[2025-10-13 07:53:52] 2025-10-13 11:52:53,686 | INFO     | all data control threads have been joined
[2025-10-13 07:53:52] 2025-10-13 11:52:53,876 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:53,876 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,036 | INFO     | all job control threads have been joined
[2025-10-13 07:53:52] 2025-10-13 11:52:54,089 | INFO     | [payload] control thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,156 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,241 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:53:52] 2025-10-13 11:52:54,609 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,692 | INFO     | [data] control thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,864 | INFO     | [job] validate thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:54,877 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,043 | INFO     | [job] control thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,141 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,249 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,356 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,379 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:55,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:53:52] 2025-10-13 11:52:56,649 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:52:58,482 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:53:52] 2025-10-13 11:53:22,739 | INFO     | PID=1397847 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:53:52] 2025-10-13 11:53:22,740 | INFO     | .. there are 25 such processes running
[2025-10-13 07:53:52] 2025-10-13 11:53:22,741 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:53:52] 2025-10-13 11:53:22,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:53:52] 2025-10-13 11:53:22,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:53:52] 2025-10-13 11:53:45,652 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:53:52] 2025-10-13 11:53:46,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412325132096)>', '<ExcThread(monitor, started 140411557353216)>']
[2025-10-13 07:53:52] 2025-10-13 11:53:47,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:53:52] 2025-10-13 11:53:47,850 | INFO     | [monitor] control thread has ended
[2025-10-13 07:53:52] 2025-10-13 11:53:51,993 | INFO     | all workflow threads have been joined
[2025-10-13 07:53:52] 2025-10-13 11:53:51,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:53:52] 2025-10-13 11:53:51,996 | INFO     | traces error code: 0
[2025-10-13 07:53:52] 2025-10-13 11:53:51,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:53:52] 2025-10-13 11:53:52,143 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:53:52] 2025-10-13 11:53:52,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:53:52] 2025-10-13 11:53:52,148 [wrapper] pilotpid: 1397847
[2025-10-13 07:53:52] 2025-10-13 11:53:52,151 [wrapper] Pilot exit status: 0
[2025-10-13 07:53:52] 2025-10-13 11:53:52,161 [wrapper] pandaids: 6841070185
[2025-10-13 07:53:52] 2025-10-13 11:53:52,230 [wrapper] cleanup supervisor_pilot 1947205 1397848
[2025-10-13 07:53:52] 2025-10-13 11:53:52,233 [wrapper] Test setup, not cleaning
[2025-10-13 07:53:52] 2025-10-13 11:53:52,237 [wrapper] apfmon messages muted
[2025-10-13 07:53:52] 2025-10-13 11:53:52,241 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:53:52] 2025-10-13 11:53:52,244 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:53:52]  *** Error codes and diagnostics ***
[2025-10-13 07:53:52]     "exeErrorCode": 0,
[2025-10-13 07:53:52]     "exeErrorDiag": "",
[2025-10-13 07:53:52]     "pilotErrorCode": 0,
[2025-10-13 07:53:52]     "pilotErrorDiag": "",
[2025-10-13 07:53:52]  *** Listing of results directory ***
[2025-10-13 07:53:52] total 417980
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 07:53:52] -rwx------. 1 boincer umatlas     36292 Oct 12 21:19 runpilot2-wrapper.sh
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:19 queuedata.json
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:53:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:54 run_atlas
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:54 job.xml
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas 224971093 Oct 13 04:54 EVNT.46676267._004726.pool.root.1
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 04:54 input.tar.gz
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:54 start_atlas.sh
[2025-10-13 07:53:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:54 shared
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:54 boinc_lockfile
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:54 pandaJob.out
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas    972857 Oct 13 04:54 agis_schedconf.cvmfs.json
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:53:52] drwx------. 5 boincer umatlas      4096 Oct 13 04:54 pilot3
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas      6900 Oct 13 07:46 init_data.xml
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas 195451589 Oct 13 07:52 HITS.46676269._093990.pool.root.1
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:52 boinc_task_state.xml
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas      1034 Oct 13 07:52 memory_monitor_summary.json
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas    415514 Oct 13 07:52 log.46676269._093990.job.log.tgz.1
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas      7783 Oct 13 07:52 heartbeat.json
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas        95 Oct 13 07:53 pilot_heartbeat.json
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:53 boinc_mmap_file
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:53 wrapper_checkpoint.txt
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas      4824 Oct 13 07:53 pilotlog.txt
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas   1431366 Oct 13 07:53 log.46676269._093990.job.log.1
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas       357 Oct 13 07:53 output.list
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:53 runtime_log
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:53 result.tar.gz
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 07:53 runtime_log.err
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas       654 Oct 13 07:53 I3QNDmUOMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkRVMDmGM2YTo.diag
[2025-10-13 07:53:52] -rw-r--r--. 1 boincer umatlas     21249 Oct 13 07:53 stderr.txt
[2025-10-13 07:53:52] HITS file was successfully produced:
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas 195451589 Oct 13 07:52 shared/HITS.pool.root.1
[2025-10-13 07:53:52]  *** Contents of shared directory: ***
[2025-10-13 07:53:52] total 412972
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas 224971093 Oct 13 04:54 ATLAS.root_0
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 04:54 input.tar.gz
[2025-10-13 07:53:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:54 start_atlas.sh
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas 195451589 Oct 13 07:52 HITS.pool.root.1
[2025-10-13 07:53:52] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:53 result.tar.gz
07:53:53 (1392111): run_atlas exited; CPU time 32655.846109
07:53:53 (1392111): called boinc_finish(0)

</stderr_txt>
]]>

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