Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:00:54 (3608654): wrapper (7.7.26015): starting
19:00:54 (3608654): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:00:54] Arguments: --nthreads 3
[2025-10-13 19:00:54] Threads: 3
[2025-10-13 19:00:54] Checking for CVMFS
[2025-10-13 19:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:00:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:00:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:00:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:00:54] 2.9.2.0 1859496 5698 81412 151667 2 57 29870032 36864000 0 130560 0 4594550 99.991 199927 834 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:00:54] CVMFS is ok
[2025-10-13 19:00:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:00:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:00:54] Further information can be found at the LHC@home message board.
[2025-10-13 19:00:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:00:54] Checking for apptainer binary...
[2025-10-13 19:00:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:00:54] Running /usr/bin/apptainer --version
[2025-10-13 19:00:54] apptainer version 1.4.1-1.1
[2025-10-13 19:00:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:00:54] atlasA228b
[2025-10-13 19:00:54] apptainer works
[2025-10-13 19:00:54] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:00:54] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:00:54] Starting ATLAS job with PandaID=6842370876
[2025-10-13 19:00:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:14:18 (3628706): wrapper (7.7.26015): starting
20:14:18 (3628706): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 20:14:18] Arguments: --nthreads 3
[2025-10-13 20:14:18] Threads: 3
[2025-10-13 20:14:18] This job has been restarted, cleaning up previous attempt
[2025-10-13 20:14:18] Checking for CVMFS
[2025-10-13 20:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:14:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:14:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:14:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:14:19] 2.9.2.0 3628831 0 30012 151670 3 1 29878748 36864000 0 130560 0 0 0.000 1291 2492 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 20:14:19] CVMFS is ok
[2025-10-13 20:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:14:19] Further information can be found at the LHC@home message board.
[2025-10-13 20:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:14:19] Checking for apptainer binary...
[2025-10-13 20:14:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:14:19] Running /usr/bin/apptainer --version
[2025-10-13 20:14:19] apptainer version 1.4.1-1.1
[2025-10-13 20:14:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:14:19] atlasA228b
[2025-10-13 20:14:19] apptainer works
[2025-10-13 20:14:19] Set ATHENA_PROC_NUMBER=3
[2025-10-13 20:14:19] Set ATHENA_CORE_NUMBER=3
[2025-10-13 20:14:19] Starting ATLAS job with PandaID=6842370876
[2025-10-13 20:14:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:37:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:37:59] ID="centos"
[2025-10-13 21:37:59] ID_LIKE="rhel fedora"
[2025-10-13 21:37:59] VERSION_ID="7"
[2025-10-13 21:37:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:37:59] ANSI_COLOR="0;31"
[2025-10-13 21:37:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:37:59] HOME_URL="https://www.centos.org/"
[2025-10-13 21:37:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:37:59] 
[2025-10-13 21:37:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:37:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:37:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:37:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:37:59] 
[2025-10-13 21:37:59] 2025-10-13 19:37:27,582 | INFO     | ***************************************
[2025-10-13 21:37:59] 2025-10-13 19:37:28,083 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 21:37:59] 2025-10-13 19:37:28,096 | INFO     | sufficient remaining disk space (276012466176 B)
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | INFO     | update_server=False
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | INFO     | aborting loop
[2025-10-13 21:37:59] 2025-10-13 19:37:28,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:37:59] 2025-10-13 19:37:28,635 | INFO     | all job control threads have been joined
[2025-10-13 21:37:59] 2025-10-13 19:37:28,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:37:59] 2025-10-13 19:37:28,938 | INFO     | all data control threads have been joined
[2025-10-13 21:37:59] 2025-10-13 19:37:29,085 | INFO     | all payload control threads have been joined
[2025-10-13 21:37:59] 2025-10-13 19:37:29,102 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,103 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,103 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,163 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,421 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,640 | INFO     | [job] control thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,688 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:29,944 | INFO     | [data] control thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,091 | INFO     | [payload] control thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,192 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,220 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,508 | INFO     | [job] validate thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:30,840 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:32,104 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:33,497 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:37:59] 2025-10-13 19:37:38,475 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:37:59] 2025-10-13 19:37:39,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:37:59] 2025-10-13 19:37:40,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153908860736)>', '<ExcThread(monitor, started 140153397946112)>']
[2025-10-13 21:37:59] 2025-10-13 19:37:45,806 | INFO     | all workflow threads have been joined
[2025-10-13 21:37:59] 2025-10-13 19:37:45,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:37:59] 2025-10-13 19:37:45,807 | INFO     | traces error code: 0
[2025-10-13 21:37:59] 2025-10-13 19:37:45,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:37:59] 2025-10-13 19:37:59,042 | INFO     | PID=3632910 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:37:59] 2025-10-13 19:37:59,042 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:37:59] 2025-10-13 19:37:59,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:37:59] 2025-10-13 19:37:59,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:37:59] 2025-10-13 19:37:59,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:37:59] 2025-10-13 19:37:59,043 | INFO     | [monitor] control thread has ended
[2025-10-13 21:37:59] 2025-10-13 19:37:59,090 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:37:59] 2025-10-13 19:37:59,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:37:59] 2025-10-13 19:37:59,095 [wrapper] pilotpid: 3632910
[2025-10-13 21:37:59] 2025-10-13 19:37:59,098 [wrapper] Pilot exit status: 0
[2025-10-13 21:37:59] 2025-10-13 19:37:59,105 [wrapper] pandaids: 6842370876 6842370876
[2025-10-13 21:37:59] 2025-10-13 19:37:59,123 [wrapper] cleanup supervisor_pilot 3651844 3632911
[2025-10-13 21:37:59] 2025-10-13 19:37:59,126 [wrapper] Test setup, not cleaning
[2025-10-13 21:37:59] 2025-10-13 19:37:59,128 [wrapper] apfmon messages muted
[2025-10-13 21:37:59] 2025-10-13 19:37:59,131 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:37:59] 2025-10-13 19:37:59,133 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:37:59]  *** Error codes and diagnostics ***
[2025-10-13 21:37:59]     "exeErrorCode": 0,
[2025-10-13 21:37:59]     "exeErrorDiag": "",
[2025-10-13 21:37:59]     "pilotErrorCode": 0,
[2025-10-13 21:37:59]     "pilotErrorDiag": "",
[2025-10-13 21:37:59]  *** Listing of results directory ***
[2025-10-13 21:37:59] total 630008
[2025-10-13 21:37:59] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 21:37:59] -rwx------ 1 boinc boinc     36292 Oct 13 05:44 runpilot2-wrapper.sh
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:44 queuedata.json
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:37:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:00 run_atlas
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:00 job.xml
[2025-10-13 21:37:59] -rw-r--r-- 3 boinc boinc 221836763 Oct 13 19:00 EVNT.46676267._004587.pool.root.1
[2025-10-13 21:37:59] -rw-r--r-- 3 boinc boinc 221836763 Oct 13 19:00 ATLAS.root_0
[2025-10-13 21:37:59] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:00 input.tar.gz
[2025-10-13 21:37:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:00 start_atlas.sh
[2025-10-13 21:37:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:00 shared
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:00 boinc_setup_complete
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:00 boinc_lockfile
[2025-10-13 21:37:59] -rw------- 1 boinc boinc   1560580 Oct 13 19:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc      6455 Oct 13 20:14 init_data.xml
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc      2549 Oct 13 20:14 pandaJob.out
[2025-10-13 21:37:59] -rw------- 1 boinc boinc    972799 Oct 13 20:14 agis_schedconf.cvmfs.json
[2025-10-13 21:37:59] -rw------- 1 boinc boinc 195572596 Oct 13 21:36 HITS.46676269._096137.pool.root.1
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:37 boinc_task_state.xml
[2025-10-13 21:37:59] -rw------- 1 boinc boinc      1010 Oct 13 21:37 memory_monitor_summary.json
[2025-10-13 21:37:59] -rw------- 1 boinc boinc    261744 Oct 13 21:37 log.46676269._096137.job.log.tgz.1
[2025-10-13 21:37:59] -rw------- 1 boinc boinc      7752 Oct 13 21:37 heartbeat.json
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:37 boinc_mmap_file
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:37 wrapper_checkpoint.txt
[2025-10-13 21:37:59] -rw------- 1 boinc boinc       747 Oct 13 21:37 pilotlog.txt
[2025-10-13 21:37:59] -rw------- 1 boinc boinc        96 Oct 13 21:37 pilot_heartbeat.json
[2025-10-13 21:37:59] -rw------- 1 boinc boinc    730897 Oct 13 21:37 log.46676269._096137.job.log.1
[2025-10-13 21:37:59] -rw------- 1 boinc boinc       357 Oct 13 21:37 output.list
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:37 runtime_log
[2025-10-13 21:37:59] -rw------- 1 boinc boinc   1013760 Oct 13 21:37 result.tar.gz
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc      8882 Oct 13 21:37 runtime_log.err
[2025-10-13 21:37:59] -rw------- 1 boinc boinc       787 Oct 13 21:37 9XoMDmafOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIgVMDmZ8qGVm.diag
[2025-10-13 21:37:59] -rw-r--r-- 1 boinc boinc     10846 Oct 13 21:37 stderr.txt
[2025-10-13 21:37:59] HITS file was successfully produced:
[2025-10-13 21:37:59] -rw------- 1 boinc boinc 195572596 Oct 13 21:36 shared/HITS.pool.root.1
[2025-10-13 21:37:59]  *** Contents of shared directory: ***
[2025-10-13 21:37:59] total 409208
[2025-10-13 21:37:59] -rw-r--r-- 3 boinc boinc 221836763 Oct 13 19:00 ATLAS.root_0
[2025-10-13 21:37:59] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:00 input.tar.gz
[2025-10-13 21:37:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:00 start_atlas.sh
[2025-10-13 21:37:59] -rw------- 1 boinc boinc 195572596 Oct 13 21:36 HITS.pool.root.1
[2025-10-13 21:37:59] -rw------- 1 boinc boinc   1013760 Oct 13 21:37 result.tar.gz
21:38:00 (3628706): run_atlas exited; CPU time 14258.663541
21:38:00 (3628706): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN