Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:30 (2364319): wrapper (7.7.26015): starting
04:55:30 (2364319): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 04:55:30] Arguments: --nthreads 10
[2025-10-13 04:55:30] Threads: 10
[2025-10-13 04:55:30] Checking for CVMFS
[2025-10-13 04:55:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:55:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:55:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:55:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:55:31] 2.13.2.0 79137 136130 584792 151654 2 704 30487407 40960001 43866 16776704 0 477135128 99.819 223920286 32252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:55:31] CVMFS is ok
[2025-10-13 04:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:55:31] Further information can be found at the LHC@home message board.
[2025-10-13 04:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:55:31] Checking for apptainer binary...
[2025-10-13 04:55:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:55:31] Running /usr/bin/apptainer --version
[2025-10-13 04:55:32] apptainer version 1.4.3-1.el9
[2025-10-13 04:55:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:55:33] c8-7-6.aglt2.org
[2025-10-13 04:55:33] apptainer works
[2025-10-13 04:55:33] Set ATHENA_PROC_NUMBER=10
[2025-10-13 04:55:33] Set ATHENA_CORE_NUMBER=10
[2025-10-13 04:55:33] Starting ATLAS job with PandaID=6842363101
[2025-10-13 04:55:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:22:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:22:25]  status=None
[2025-10-13 06:22:25]  status_code=0
[2025-10-13 06:22:25]  storage_token=
[2025-10-13 06:22:25]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6842363101/log.46676269._096120.job.log.tgz.1
[2025-10-13 06:22:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/27/log.46676269._096120.job.log.tgz.1
[2025-10-13 06:22:25]  workdir=None
[2025-10-13 06:22:25] ]
[2025-10-13 06:22:25] 2025-10-13 10:21:45,203 | INFO     | transferring file log.46676269._096120.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6842363101/log.46676269._096120.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:22:25] 2025-10-13 10:21:45,203 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6842363101/log.46676269._096120.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._096120.job
[2025-10-13 06:22:25] 2025-10-13 10:21:45,223 | INFO     | adding to output.list: log.46676269._096120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/27/log.46676269._096120.job.log.tg
[2025-10-13 06:22:25] 2025-10-13 10:21:45,224 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:22:25] 2025-10-13 10:21:45,224 | INFO     | summary of transferred files:
[2025-10-13 06:22:25] 2025-10-13 10:21:45,224 | INFO     |  -- lfn=log.46676269._096120.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:22:25] 2025-10-13 10:21:45,224 | INFO     | stage-out finished correctly
[2025-10-13 06:22:25] 2025-10-13 10:21:45,279 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:22:25] 2025-10-13 10:21:46,532 | INFO     | time since job start (5098s) is within the limit (172800.0s)
[2025-10-13 06:22:25] 2025-10-13 10:21:47,830 | INFO     | job 6842363101 has state=finished
[2025-10-13 06:22:25] 2025-10-13 10:21:47,830 | INFO     | preparing for final server update for job 6842363101 in state='finished'
[2025-10-13 06:22:25] 2025-10-13 10:21:47,831 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:22:25] 2025-10-13 10:21:47,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:22:25] 2025-10-13 10:21:47,832 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:22:25] 2025-10-13 10:21:47,832 | INFO     | job 6842363101 has finished - writing final server update
[2025-10-13 06:22:25] 2025-10-13 10:21:47,832 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:22:25] 2025-10-13 10:21:47,832 | INFO     | executing command: lscpu
[2025-10-13 06:22:25] 2025-10-13 10:21:47,897 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:22:25] 2025-10-13 10:21:48,182 | INFO     | PID=2380065 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 06:22:25] 2025-10-13 10:21:48,182 | INFO     | .. there are 49 such processes running
[2025-10-13 06:22:25] 2025-10-13 10:21:48,750 | WARNING  | process 2443313 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:22:25] 2025-10-13 10:21:48,750 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842363101/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:22:25] 2025-10-13 10:21:49,183 | INFO     | time since job start (5101s) is within the limit (172800.0s)
[2025-10-13 06:22:25] 2025-10-13 10:21:49,206 | INFO     | number of running child processes to parent process 2443313: 1
[2025-10-13 06:22:25] 2025-10-13 10:21:49,206 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:22:25] 2025-10-13 10:21:51,189 | INFO     | time since job start (5103s) is within the limit (172800.0s)
[2025-10-13 06:22:25] 2025-10-13 10:21:51,718 | INFO     | monitor loop #317: job 0:6842363101 is in state 'finished'
[2025-10-13 06:22:25] 2025-10-13 10:21:51,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:22:25] 2025-10-13 10:21:52,544 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:22:25] 2025-10-13 10:21:52,548 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3770.0114375000003
[2025-10-13 06:22:25] 2025-10-13 10:21:52,561 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842363101/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:22:25] 2025-10-13 10:21:52,562 | INFO     | extracted standard info from prmon json
[2025-10-13 06:22:25] 2025-10-13 10:21:52,562 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:22:25] 2025-10-13 10:21:52,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:22:25] 2025-10-13 10:21:52,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:22:25] 2025-10-13 10:21:52,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:22:25] 2025-10-13 10:21:52,563 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:22:25] 2025-10-13 10:21:52,563 | INFO     | sum of square deviations: 125641739.63513508
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | sum of deviations: 3417016443.6351347
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | mean x: 1760348508.608108
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | mean y: 2563779.608108108
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | -- intersect: -47872766647.29078
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | intersect: -47872766647.29078
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | chi2: 0.0742091829791946
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | -- intersect: -47872766647.29078
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | current memory leak: 27.20 B/s (using 74 data points, chi2=0.07)
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | could have reported an average CPU frequency of 3762 MHz (6 samples)
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | ..............................
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | . Timing measurements:
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | . get job = 0 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,564 | INFO     | . initial setup = 7 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | . payload setup = 48 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | . stage-in = 0 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | . payload execution = 4964 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | . stage-out = 0 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | . log creation = 0 s
[2025-10-13 06:22:25] 2025-10-13 10:21:52,565 | INFO     | ..............................
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | 
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | job summary report
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | --------------------------------------------------
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | PanDA job id: 6842363101
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | task id: 46676269
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | errors: (none)
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | pilot state: finished 
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | transexitcode: 0
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | exeerrorcode: 0
[2025-10-13 06:22:25] 2025-10-13 10:21:53,103 | INFO     | exeerrordiag: 
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | exitcode: 0
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | exitmsg: OK
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | cpuconsumptiontime: 23591 s
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | nevents: 400
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | neventsw: 0
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | pid: 2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | pgrp: 2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | corecount: 10
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | event service: False
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 40: 2349259, 44: 2349415, 5016: 2375663, 5017: 2384716, 5025: 2384854}
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | --------------------------------------------------
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | 
[2025-10-13 06:22:25] 2025-10-13 10:21:53,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | job 6842363101 has completed (purged errors)
[2025-10-13 06:22:25] 2025-10-13 10:21:53,124 | INFO     | overall cleanup function is called
[2025-10-13 06:22:25] 2025-10-13 10:21:54,131 | INFO     | --- collectZombieJob: --- 10, [2443313]
[2025-10-13 06:22:25] 2025-10-13 10:21:54,131 | INFO     | zombie collector waiting for pid 2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:54,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:22:25] 2025-10-13 10:21:54,131 | INFO     | collected zombie processes
[2025-10-13 06:22:25] 2025-10-13 10:21:54,131 | INFO     | will attempt to kill all subprocesses of pid=2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:54,641 | INFO     | process IDs to be killed: [2443313] (in reverse order)
[2025-10-13 06:22:25] 2025-10-13 10:21:54,831 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:22:25] 2025-10-13 10:21:54,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:22:25] 2025-10-13 10:21:54,860 | INFO     | did not find any defunct processes belonging to 2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:54,888 | INFO     | did not find any defunct processes belonging to 2443313
[2025-10-13 06:22:25] 2025-10-13 10:21:54,889 | INFO     | ready for new job
[2025-10-13 06:22:25] 2025-10-13 10:21:54,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:22:25] 2025-10-13 10:21:54,890 | INFO     | ***************************************
[2025-10-13 06:22:25] 2025-10-13 10:21:54,890 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:22:25] 2025-10-13 10:21:54,890 | INFO     | ***************************************
[2025-10-13 06:22:25] 2025-10-13 10:21:54,890 | INFO     | 
[2025-10-13 06:22:25] 2025-10-13 10:21:54,908 | INFO     | architecture information:
[2025-10-13 06:22:25] 2025-10-13 10:21:54,909 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:22:25] 2025-10-13 10:21:54,924 | INFO     | cat /etc/os-release:
[2025-10-13 06:22:25] NAME="CentOS Linux"
[2025-10-13 06:22:25] VERSION="7 (Core)"
[2025-10-13 06:22:25] ID="centos"
[2025-10-13 06:22:25] ID_LIKE="rhel fedora"
[2025-10-13 06:22:25] VERSION_ID="7"
[2025-10-13 06:22:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:22:25] ANSI_COLOR="0;31"
[2025-10-13 06:22:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:22:25] HOME_URL="https://www.centos.org/"
[2025-10-13 06:22:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:22:25] 
[2025-10-13 06:22:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:22:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:22:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:22:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:22:25] 
[2025-10-13 06:22:25] 2025-10-13 10:21:54,924 | INFO     | ***************************************
[2025-10-13 06:22:25] 2025-10-13 10:21:55,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 06:22:25] 2025-10-13 10:21:55,443 | INFO     | sufficient remaining disk space (169324052480 B)
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | INFO     | update_server=False
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:22:25] 2025-10-13 10:21:55,444 | INFO     | aborting loop
[2025-10-13 06:22:25] 2025-10-13 10:21:55,661 | INFO     | all data control threads have been joined
[2025-10-13 06:22:25] 2025-10-13 10:21:55,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:22:25] 2025-10-13 10:21:55,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:22:25] 2025-10-13 10:21:55,955 | INFO     | all job control threads have been joined
[2025-10-13 06:22:25] 2025-10-13 10:21:56,450 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,453 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,579 | INFO     | all payload control threads have been joined
[2025-10-13 06:22:25] 2025-10-13 10:21:56,644 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,652 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,667 | INFO     | [data] control thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,711 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,753 | INFO     | [job] validate thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,845 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:56,960 | INFO     | [job] control thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:57,365 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:57,482 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:57,584 | INFO     | [payload] control thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:57,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:22:25] 2025-10-13 10:21:57,798 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:58,632 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:21:58,688 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:22:25] 2025-10-13 10:21:59,852 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:22:05,578 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:22:25] 2025-10-13 10:22:06,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:22:25] 2025-10-13 10:22:08,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057421715264)>', '<ExcThread(monitor, started 140056761181952)>']
[2025-10-13 06:22:25] 2025-10-13 10:22:13,163 | INFO     | all workflow threads have been joined
[2025-10-13 06:22:25] 2025-10-13 10:22:13,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:22:25] 2025-10-13 10:22:13,164 | INFO     | traces error code: 0
[2025-10-13 06:22:25] 2025-10-13 10:22:13,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:22:25] 2025-10-13 10:22:24,831 | INFO     | PID=2380065 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:22:25] 2025-10-13 10:22:24,831 | INFO     | .. there are 49 such processes running
[2025-10-13 06:22:25] 2025-10-13 10:22:24,832 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:22:25] 2025-10-13 10:22:24,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:22:25] 2025-10-13 10:22:24,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:22:25] 2025-10-13 10:22:24,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:22:25] 2025-10-13 10:22:24,832 | INFO     | [monitor] control thread has ended
[2025-10-13 06:22:25] 2025-10-13 10:22:24,980 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:22:25] 2025-10-13 10:22:24,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:22:25] 2025-10-13 10:22:24,984 [wrapper] pilotpid: 2380065
[2025-10-13 06:22:25] 2025-10-13 10:22:24,987 [wrapper] Pilot exit status: 0
[2025-10-13 06:22:25] 2025-10-13 10:22:25,002 [wrapper] pandaids: 6842363101
[2025-10-13 06:22:25] 2025-10-13 10:22:25,107 [wrapper] cleanup supervisor_pilot 3535784 2380067
[2025-10-13 06:22:25] 2025-10-13 10:22:25,109 [wrapper] Test setup, not cleaning
[2025-10-13 06:22:25] 2025-10-13 10:22:25,111 [wrapper] apfmon messages muted
[2025-10-13 06:22:25] 2025-10-13 10:22:25,112 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:22:25] 2025-10-13 10:22:25,114 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:22:25]  *** Error codes and diagnostics ***
[2025-10-13 06:22:25]     "exeErrorCode": 0,
[2025-10-13 06:22:25]     "exeErrorDiag": "",
[2025-10-13 06:22:25]     "pilotErrorCode": 0,
[2025-10-13 06:22:25]     "pilotErrorDiag": "",
[2025-10-13 06:22:25]  *** Listing of results directory ***
[2025-10-13 06:22:25] total 410244
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 06:22:25] -rwx------. 1 boincer umatlas     36292 Oct 12 23:43 runpilot2-wrapper.sh
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:43 queuedata.json
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:22:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:55 run_atlas
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:55 job.xml
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas 222171360 Oct 13 04:55 EVNT.46676267._001820.pool.root.1
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:55 start_atlas.sh
[2025-10-13 06:22:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:55 shared
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 04:55 input.tar.gz
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:55 boinc_lockfile
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:55 pandaJob.out
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas    972857 Oct 13 04:56 agis_schedconf.cvmfs.json
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:22:25] drwx------. 5 boincer umatlas      4096 Oct 13 04:56 pilot3
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas 191983857 Oct 13 06:21 HITS.46676269._096120.pool.root.1
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:21 boinc_task_state.xml
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas        95 Oct 13 06:21 pilot_heartbeat.json
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas      1046 Oct 13 06:21 memory_monitor_summary.json
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas      7162 Oct 13 06:21 init_data.xml
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas    356940 Oct 13 06:21 log.46676269._096120.job.log.tgz.1
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas      7800 Oct 13 06:21 heartbeat.json
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:22 boinc_mmap_file
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:22 wrapper_checkpoint.txt
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas       823 Oct 13 06:22 pilotlog.txt
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas    657412 Oct 13 06:22 log.46676269._096120.job.log.1
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas       357 Oct 13 06:22 output.list
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:22 runtime_log
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas   1034240 Oct 13 06:22 result.tar.gz
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 06:22 runtime_log.err
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas       654 Oct 13 06:22 nExNDmbeOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmofmNDmSLAUMo.diag
[2025-10-13 06:22:25] -rw-r--r--. 1 boincer umatlas     22134 Oct 13 06:22 stderr.txt
[2025-10-13 06:22:25] HITS file was successfully produced:
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas 191983857 Oct 13 06:21 shared/HITS.pool.root.1
[2025-10-13 06:22:25]  *** Contents of shared directory: ***
[2025-10-13 06:22:25] total 406052
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas 222171360 Oct 13 04:55 ATLAS.root_0
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:55 start_atlas.sh
[2025-10-13 06:22:25] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 04:55 input.tar.gz
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas 191983857 Oct 13 06:21 HITS.pool.root.1
[2025-10-13 06:22:25] -rw-------. 1 boincer umatlas   1034240 Oct 13 06:22 result.tar.gz
06:22:26 (2364319): run_atlas exited; CPU time 23723.795229
06:22:26 (2364319): called boinc_finish(0)

</stderr_txt>
]]>

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