Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
15:43:48 (2692384): wrapper (7.7.26015): starting
15:43:48 (2692384): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 15:43:48] Arguments: --nthreads 12
[2025-10-13 15:43:48] Threads: 12
[2025-10-13 15:43:48] Checking for CVMFS
[2025-10-13 15:43:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:43:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:43:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:43:48] 2.13.2.0 2584650 313 48084 151662 3 188 2587218 4096000 915 130560 0 277790 99.986 13361 431 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 15:43:48] CVMFS is ok
[2025-10-13 15:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:43:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 15:43:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 15:43:48] Further information can be found at the LHC@home message board.
[2025-10-13 15:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:43:48] Checking for apptainer binary...
[2025-10-13 15:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:43:48] Running /usr/bin/apptainer --version
[2025-10-13 15:43:48] apptainer version 1.4.3
[2025-10-13 15:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:43:48] 9570
[2025-10-13 15:43:48] apptainer works
[2025-10-13 15:43:48] Set ATHENA_PROC_NUMBER=12
[2025-10-13 15:43:48] Set ATHENA_CORE_NUMBER=12
[2025-10-13 15:43:48] Starting ATLAS job with PandaID=6841070231
[2025-10-13 15:43:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:51:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:51:33] 2025-10-13 18:50:38,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:51:33] 2025-10-13 18:50:38,808 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:51:33] 2025-10-13 18:50:38,808 | INFO     | sum of square deviations: 8540676611.672171
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | sum of deviations: 98577338665.0397
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | mean x: 1760372241.6125827
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | mean y: 2639260.4105960266
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | -- intersect: -20315752188.90607
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | intersect: -20315752188.90607
[2025-10-13 20:51:33] 2025-10-13 18:50:38,809 | INFO     | chi2: 2.400082152991653
[2025-10-13 20:51:33] 2025-10-13 18:50:38,810 | INFO     | sum of square deviations: 8123460554.107783
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | sum of deviations: 115886447311.81824
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | mean x: 1760372089.114478
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | mean y: 2645485.1818181816
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | -- intersect: -25110207097.231743
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | intersect: -25110207097.231743
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | chi2: 1.694932678177054
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | current chi2=1.694932678177054 (change=29.380222420121942 %)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,811 | INFO     | sum of square deviations: 7720058709.041099
[2025-10-13 20:51:33] 2025-10-13 18:50:38,812 | INFO     | sum of deviations: 112097935703.49318
[2025-10-13 20:51:33] 2025-10-13 18:50:38,812 | INFO     | mean x: 1760371936.6164384
[2025-10-13 20:51:33] 2025-10-13 18:50:38,812 | INFO     | mean y: 2644052.897260274
[2025-10-13 20:51:33] 2025-10-13 18:50:38,812 | INFO     | -- intersect: -25558568316.376804
[2025-10-13 20:51:33] 2025-10-13 18:50:38,812 | INFO     | intersect: -25558568316.376804
[2025-10-13 20:51:33] 2025-10-13 18:50:38,813 | INFO     | chi2: 1.695088856194437
[2025-10-13 20:51:33] 2025-10-13 18:50:38,813 | INFO     | current chi2=1.695088856194437 (change=-0.009214408300338834 %)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,813 | INFO     | right removable region: 291
[2025-10-13 20:51:33] 2025-10-13 18:50:38,813 | INFO     | sum of square deviations: 8123439814.107783
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | sum of deviations: 41727178553.38046
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | mean x: 1760372394.114478
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | mean y: 2659933.8417508416
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | -- intersect: -9039737731.502981
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | intersect: -9039737731.502981
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | chi2: 0.908263599326164
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | current chi2=0.908263599326164 (change=62.15697874366375 %)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,814 | INFO     | sum of square deviations: 7720017229.041099
[2025-10-13 20:51:33] 2025-10-13 18:50:38,815 | INFO     | sum of deviations: 24167127879.71234
[2025-10-13 20:51:33] 2025-10-13 18:50:38,815 | INFO     | mean x: 1760372546.6164384
[2025-10-13 20:51:33] 2025-10-13 18:50:38,815 | INFO     | mean y: 2666558.934931507
[2025-10-13 20:51:33] 2025-10-13 18:50:38,815 | INFO     | -- intersect: -5508091667.092837
[2025-10-13 20:51:33] 2025-10-13 18:50:38,816 | INFO     | intersect: -5508091667.092837
[2025-10-13 20:51:33] 2025-10-13 18:50:38,816 | INFO     | chi2: 0.8158048979282152
[2025-10-13 20:51:33] 2025-10-13 18:50:38,816 | INFO     | current chi2=0.8158048979282152 (change=10.179721114723016 %)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,816 | INFO     | left removable region: 20
[2025-10-13 20:51:33] 2025-10-13 18:50:38,816 | INFO     | sum of square deviations: 6171324034.221398
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | sum of deviations: 20939231011.295185
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | mean x: 1760372516.118081
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | mean y: 2680046.4907749076
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | -- intersect: -5970243523.3185005
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | intersect: -5970243523.3185005
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | chi2: 0.011686616941033717
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | -- intersect: -5970243523.3185005
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | current memory leak: 3.39 B/s (using 271 data points, chi2=0.01)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | could have reported an average CPU frequency of 2396 MHz (14 samples)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | ..............................
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | . Timing measurements:
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | . get job = 0 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | . initial setup = 1 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | . payload setup = 4 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,817 | INFO     | . stage-in = 0 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,818 | INFO     | . payload execution = 18372 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,818 | INFO     | . stage-out = 1 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,818 | INFO     | . log creation = 0 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,818 | INFO     | ..............................
[2025-10-13 20:51:33] 2025-10-13 18:50:38,864 | INFO     | 
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | job summary report
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | --------------------------------------------------
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | PanDA job id: 6841070231
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | task id: 46676269
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | errors: (none)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | pilot state: finished 
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | transexitcode: 0
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | exeerrorcode: 0
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | exeerrordiag: 
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | exitcode: 0
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | exitmsg: OK
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | cpuconsumptiontime: 27182 s
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | nevents: 400
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | neventsw: 0
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | pid: 2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | pgrp: 2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | corecount: 12
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | event service: False
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 18380: 2381600, 18381: 2390612, 18382: 2390668, 18388: 2390990}
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | --------------------------------------------------
[2025-10-13 20:51:33] 2025-10-13 18:50:38,865 | INFO     | 
[2025-10-13 20:51:33] 2025-10-13 18:50:38,866 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-13 20:51:33] 2025-10-13 18:50:38,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | job 6841070231 has completed (purged errors)
[2025-10-13 20:51:33] 2025-10-13 18:50:38,884 | INFO     | overall cleanup function is called
[2025-10-13 20:51:33] 2025-10-13 18:50:39,893 | INFO     | --- collectZombieJob: --- 10, [2702402]
[2025-10-13 20:51:33] 2025-10-13 18:50:39,893 | INFO     | zombie collector waiting for pid 2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:39,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:51:33] 2025-10-13 18:50:39,893 | INFO     | collected zombie processes
[2025-10-13 20:51:33] 2025-10-13 18:50:39,893 | INFO     | will attempt to kill all subprocesses of pid=2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:39,916 | INFO     | process IDs to be killed: [2702402] (in reverse order)
[2025-10-13 20:51:33] 2025-10-13 18:50:39,946 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:51:33] 2025-10-13 18:50:39,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:51:33] 2025-10-13 18:50:39,948 | INFO     | did not find any defunct processes belonging to 2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:39,949 | INFO     | did not find any defunct processes belonging to 2702402
[2025-10-13 20:51:33] 2025-10-13 18:50:39,949 | INFO     | ready for new job
[2025-10-13 20:51:33] 2025-10-13 18:50:39,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | ***************************************
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | ***************************************
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | 
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | pilot is running in a VM
[2025-10-13 20:51:33] 2025-10-13 18:50:39,952 | INFO     | architecture information:
[2025-10-13 20:51:33] 2025-10-13 18:50:39,953 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:51:33] 2025-10-13 18:50:39,969 | INFO     | cat /etc/os-release:
[2025-10-13 20:51:33] NAME="CentOS Linux"
[2025-10-13 20:51:33] VERSION="7 (Core)"
[2025-10-13 20:51:33] ID="centos"
[2025-10-13 20:51:33] ID_LIKE="rhel fedora"
[2025-10-13 20:51:33] VERSION_ID="7"
[2025-10-13 20:51:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:51:33] ANSI_COLOR="0;31"
[2025-10-13 20:51:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:51:33] HOME_URL="https://www.centos.org/"
[2025-10-13 20:51:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:51:33] 
[2025-10-13 20:51:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:51:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:51:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:51:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:51:33] 
[2025-10-13 20:51:33] 2025-10-13 18:50:39,969 | INFO     | ***************************************
[2025-10-13 20:51:33] 2025-10-13 18:50:40,470 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-13 20:51:33] 2025-10-13 18:50:40,485 | INFO     | sufficient remaining disk space (58107887616 B)
[2025-10-13 20:51:33] 2025-10-13 18:50:40,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:51:33] 2025-10-13 18:50:40,486 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:51:33] 2025-10-13 18:50:40,486 | INFO     | update_server=False
[2025-10-13 20:51:33] 2025-10-13 18:50:40,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:51:33] 2025-10-13 18:50:40,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:51:33] 2025-10-13 18:50:40,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:51:33] 2025-10-13 18:50:40,520 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:51:33] 2025-10-13 18:50:40,520 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:51:33] 2025-10-13 18:50:40,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:51:33] 2025-10-13 18:50:40,521 | INFO     | will abort loop
[2025-10-13 20:51:33] 2025-10-13 18:50:41,071 | INFO     | all payload control threads have been joined
[2025-10-13 20:51:33] 2025-10-13 18:50:41,350 | INFO     | all data control threads have been joined
[2025-10-13 20:51:33] 2025-10-13 18:50:41,492 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,492 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,494 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,508 | INFO     | all job control threads have been joined
[2025-10-13 20:51:33] 2025-10-13 18:50:41,526 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,755 | INFO     | [job] validate thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,793 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:41,996 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,076 | INFO     | [payload] control thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,153 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,356 | INFO     | [data] control thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,509 | INFO     | [job] control thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,512 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,859 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:42,940 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:50:43,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:51:33] 2025-10-13 18:50:47,635 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:51:33] 2025-10-13 18:51:10,847 | INFO     | PID=2696056 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:51:33] 2025-10-13 18:51:10,847 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:51:33] 2025-10-13 18:51:10,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:51:33] 2025-10-13 18:51:10,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:51:33] 2025-10-13 18:51:27,140 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:51:33] 2025-10-13 18:51:28,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124381783848768)>', '<ExcThread(monitor, started 124381145577216)>']
[2025-10-13 20:51:33] 2025-10-13 18:51:28,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:51:33] 2025-10-13 18:51:28,917 | INFO     | [monitor] control thread has ended
[2025-10-13 20:51:33] 2025-10-13 18:51:33,404 | INFO     | all workflow threads have been joined
[2025-10-13 20:51:33] 2025-10-13 18:51:33,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:51:33] 2025-10-13 18:51:33,405 | INFO     | traces error code: 0
[2025-10-13 20:51:33] 2025-10-13 18:51:33,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:51:33] 2025-10-13 18:51:33,508 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:51:33] 2025-10-13 18:51:33,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:51:33] 2025-10-13 18:51:33,515 [wrapper] pilotpid: 2696056
[2025-10-13 20:51:33] 2025-10-13 18:51:33,518 [wrapper] Pilot exit status: 0
[2025-10-13 20:51:33] 2025-10-13 18:51:33,529 [wrapper] pandaids: 6841070231
[2025-10-13 20:51:33] 2025-10-13 18:51:33,553 [wrapper] cleanup supervisor_pilot 2759000 2696057
[2025-10-13 20:51:33] 2025-10-13 18:51:33,556 [wrapper] Test setup, not cleaning
[2025-10-13 20:51:33] 2025-10-13 18:51:33,559 [wrapper] apfmon messages muted
[2025-10-13 20:51:33] 2025-10-13 18:51:33,561 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:51:33] 2025-10-13 18:51:33,564 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:51:33]  *** Error codes and diagnostics ***
[2025-10-13 20:51:33]     "exeErrorCode": 0,
[2025-10-13 20:51:33]     "exeErrorDiag": "",
[2025-10-13 20:51:33]     "pilotErrorCode": 0,
[2025-10-13 20:51:33]     "pilotErrorDiag": "",
[2025-10-13 20:51:33]  *** Listing of results directory ***
[2025-10-13 20:51:33] total 422332
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:23 queuedata.json
[2025-10-13 20:51:33] -rwx------ 1 boinc boinc     36292 Oct 13 03:24 runpilot2-wrapper.sh
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:51:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:43 run_atlas
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:43 job.xml
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc 224270246 Oct 13 15:43 EVNT.46676267._004728.pool.root.1
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:43 start_atlas.sh
[2025-10-13 20:51:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:43 shared
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:43 input.tar.gz
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:43 boinc_setup_complete
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc      6411 Oct 13 15:43 init_data.xml
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:43 boinc_lockfile
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:43 pandaJob.out
[2025-10-13 20:51:33] -rw------- 1 boinc boinc    972489 Oct 13 15:43 agis_schedconf.cvmfs.json
[2025-10-13 20:51:33] drwx------ 5 boinc boinc      4096 Oct 13 15:43 pilot3
[2025-10-13 20:51:33] -rw------- 1 boinc boinc 197957384 Oct 13 20:50 HITS.46676269._094036.pool.root.1
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc       530 Oct 13 20:50 boinc_task_state.xml
[2025-10-13 20:51:33] -rw------- 1 boinc boinc        95 Oct 13 20:50 pilot_heartbeat.json
[2025-10-13 20:51:33] -rw------- 1 boinc boinc      1016 Oct 13 20:50 memory_monitor_summary.json
[2025-10-13 20:51:33] -rw------- 1 boinc boinc   1560580 Oct 13 20:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:51:33] -rw------- 1 boinc boinc    582037 Oct 13 20:50 log.46676269._094036.job.log.tgz.1
[2025-10-13 20:51:33] -rw------- 1 boinc boinc      7714 Oct 13 20:50 heartbeat.json
[2025-10-13 20:51:33] -rw------- 1 boinc boinc      5003 Oct 13 20:51 pilotlog.txt
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc        28 Oct 13 20:51 wrapper_checkpoint.txt
[2025-10-13 20:51:33] -rw------- 1 boinc boinc   2588498 Oct 13 20:51 log.46676269._094036.job.log.1
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:51 boinc_mmap_file
[2025-10-13 20:51:33] -rw------- 1 boinc boinc       357 Oct 13 20:51 output.list
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:51 runtime_log
[2025-10-13 20:51:33] -rw------- 1 boinc boinc   3184640 Oct 13 20:51 result.tar.gz
[2025-10-13 20:51:33] -rw------- 1 boinc boinc       642 Oct 13 20:51 sGZKDmXTMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1LmNDmFMGsrn.diag
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc      8737 Oct 13 20:51 runtime_log.err
[2025-10-13 20:51:33] -rw-r--r-- 1 boinc boinc     21051 Oct 13 20:51 stderr.txt
[2025-10-13 20:51:33] HITS file was successfully produced:
[2025-10-13 20:51:33] -rw------- 1 boinc boinc 197957384 Oct 13 20:50 shared/HITS.pool.root.1
[2025-10-13 20:51:33]  *** Contents of shared directory: ***
[2025-10-13 20:51:33] total 416032
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc 224270246 Oct 13 15:43 ATLAS.root_0
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:43 start_atlas.sh
[2025-10-13 20:51:33] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:43 input.tar.gz
[2025-10-13 20:51:33] -rw------- 1 boinc boinc 197957384 Oct 13 20:50 HITS.pool.root.1
[2025-10-13 20:51:33] -rw------- 1 boinc boinc   3184640 Oct 13 20:51 result.tar.gz
20:51:35 (2692384): run_atlas exited; CPU time 27174.418984
20:51:35 (2692384): called boinc_finish(0)

</stderr_txt>
]]>

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