Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
15:38:07 (2673896): wrapper (7.7.26015): starting
15:38:07 (2673896): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 15:38:07] Arguments: --nthreads 12
[2025-10-13 15:38:07] Threads: 12
[2025-10-13 15:38:07] Checking for CVMFS
[2025-10-13 15:38:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:38:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:38:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:38:08] 2.13.2.0 2584650 308 47528 151662 0 56 2585985 4096001 924 130560 0 222103 99.985 13280 436 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 15:38:08] CVMFS is ok
[2025-10-13 15:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:38:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 15:38:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 15:38:08] Further information can be found at the LHC@home message board.
[2025-10-13 15:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:38:08] Checking for apptainer binary...
[2025-10-13 15:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:38:08] Running /usr/bin/apptainer --version
[2025-10-13 15:38:08] apptainer version 1.4.3
[2025-10-13 15:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:38:09] 9570
[2025-10-13 15:38:09] apptainer works
[2025-10-13 15:38:09] Set ATHENA_PROC_NUMBER=12
[2025-10-13 15:38:09] Set ATHENA_CORE_NUMBER=12
[2025-10-13 15:38:09] Starting ATLAS job with PandaID=6842360907
[2025-10-13 15:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:41:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:41:25] 2025-10-13 18:40:32,750 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:41:25] 2025-10-13 18:40:32,760 | INFO     | sum of square deviations: 8041695012.239873
[2025-10-13 20:41:25] 2025-10-13 18:40:32,772 | INFO     | sum of deviations: 2161155531.9594955
[2025-10-13 20:41:25] 2025-10-13 18:40:32,772 | INFO     | mean x: 1760371801.6993244
[2025-10-13 20:41:25] 2025-10-13 18:40:32,772 | INFO     | mean y: 2664764.7972972975
[2025-10-13 20:41:25] 2025-10-13 18:40:32,772 | INFO     | -- intersect: -470424211.0663048
[2025-10-13 20:41:25] 2025-10-13 18:40:32,772 | INFO     | intersect: -470424211.0663048
[2025-10-13 20:41:25] 2025-10-13 18:40:32,773 | INFO     | chi2: 3.264240986098401
[2025-10-13 20:41:25] 2025-10-13 18:40:32,773 | INFO     | sum of square deviations: 7641035727.037779
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | sum of deviations: 42821860865.74227
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | mean x: 1760371649.2027493
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | mean y: 2680081.0721649486
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | -- intersect: -9862787445.459227
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | intersect: -9862787445.459227
[2025-10-13 20:41:25] 2025-10-13 18:40:32,782 | INFO     | chi2: 1.8039103628511293
[2025-10-13 20:41:25] 2025-10-13 18:40:32,783 | INFO     | current chi2=1.8039103628511293 (change=44.737218528486736 %)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,783 | INFO     | sum of square deviations: 7253911579.328653
[2025-10-13 20:41:25] 2025-10-13 18:40:32,794 | INFO     | sum of deviations: 42051023674.720314
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | mean x: 1760371496.7062938
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | mean y: 2679777.3776223776
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | -- intersect: -10202217632.076357
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | intersect: -10202217632.076357
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | chi2: 1.8046437734260627
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | current chi2=1.8046437734260627 (change=-0.040656708339670736 %)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | right removable region: 285
[2025-10-13 20:41:25] 2025-10-13 18:40:32,795 | INFO     | sum of square deviations: 7640999737.037779
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | sum of deviations: -53038130295.94158
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | mean x: 1760371954.2027493
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | mean y: 2685621.676975945
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | -- intersect: 12221876864.905924
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | intersect: 12221876864.905924
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | chi2: 1.563537812524216
[2025-10-13 20:41:25] 2025-10-13 18:40:32,807 | INFO     | current chi2=1.563537812524216 (change=52.101029942858425 %)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,818 | INFO     | sum of square deviations: 7253839599.328653
[2025-10-13 20:41:25] 2025-10-13 18:40:32,819 | INFO     | sum of deviations: -47926824862.31468
[2025-10-13 20:41:25] 2025-10-13 18:40:32,819 | INFO     | mean x: 1760372106.7062938
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | mean y: 2683604.1748251747
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | -- intersect: 11633633599.047178
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | intersect: 11633633599.047178
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | chi2: 1.5590500626547399
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | current chi2=1.5590500626547399 (change=0.28702534940495356 %)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,828 | INFO     | left removable region: 20
[2025-10-13 20:41:25] 2025-10-13 18:40:32,829 | INFO     | sum of square deviations: 5770401429.864129
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | sum of deviations: 4536822971.566034
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | mean x: 1760372076.2226415
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | mean y: 2694348.9056603773
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | -- intersect: -1381350863.7162845
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | intersect: -1381350863.7162845
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | chi2: 0.036659755582729964
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | -- intersect: -1381350863.7162845
[2025-10-13 20:41:25] 2025-10-13 18:40:32,836 | INFO     | current memory leak: 0.79 B/s (using 265 data points, chi2=0.04)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | could have reported an average CPU frequency of 2396 MHz (13 samples)
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | ..............................
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . Timing measurements:
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . get job = 0 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . initial setup = 4 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . payload setup = 20 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . stage-in = 0 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . payload execution = 18014 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . stage-out = 3 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | . log creation = 0 s
[2025-10-13 20:41:25] 2025-10-13 18:40:32,837 | INFO     | ..............................
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | 
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | job summary report
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | --------------------------------------------------
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | PanDA job id: 6842360907
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | task id: 46676269
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | errors: (none)
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | pilot state: finished 
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | transexitcode: 0
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | exeerrorcode: 0
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | exeerrordiag: 
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | exitcode: 0
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | exitmsg: OK
[2025-10-13 20:41:25] 2025-10-13 18:40:33,134 | INFO     | cpuconsumptiontime: 27055 s
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | nevents: 400
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | neventsw: 0
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | pid: 2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | pgrp: 2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | corecount: 12
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | event service: False
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | sizes: {0: 2348643, 1: 2348842, 12: 2348842, 19: 2349132, 23: 2349160, 18038: 2381371, 18039: 2381498, 18043: 2390566, 18046: 2390622, 18066: 2390816}
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | --------------------------------------------------
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | 
[2025-10-13 20:41:25] 2025-10-13 18:40:33,135 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | job 6842360907 has completed (purged errors)
[2025-10-13 20:41:25] 2025-10-13 18:40:33,189 | INFO     | overall cleanup function is called
[2025-10-13 20:41:25] 2025-10-13 18:40:34,221 | INFO     | --- collectZombieJob: --- 10, [2683928]
[2025-10-13 20:41:25] 2025-10-13 18:40:34,221 | INFO     | zombie collector waiting for pid 2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:34,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:41:25] 2025-10-13 18:40:34,221 | INFO     | collected zombie processes
[2025-10-13 20:41:25] 2025-10-13 18:40:34,221 | INFO     | will attempt to kill all subprocesses of pid=2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:34,420 | INFO     | process IDs to be killed: [2683928] (in reverse order)
[2025-10-13 20:41:25] 2025-10-13 18:40:34,555 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:41:25] 2025-10-13 18:40:34,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:41:25] 2025-10-13 18:40:34,562 | INFO     | did not find any defunct processes belonging to 2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:34,563 | INFO     | did not find any defunct processes belonging to 2683928
[2025-10-13 20:41:25] 2025-10-13 18:40:34,563 | INFO     | ready for new job
[2025-10-13 20:41:25] 2025-10-13 18:40:34,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:41:25] 2025-10-13 18:40:34,578 | INFO     | ***************************************
[2025-10-13 20:41:25] 2025-10-13 18:40:34,578 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:41:25] 2025-10-13 18:40:34,578 | INFO     | ***************************************
[2025-10-13 20:41:25] 2025-10-13 18:40:34,578 | INFO     | 
[2025-10-13 20:41:25] 2025-10-13 18:40:34,581 | INFO     | pilot is running in a VM
[2025-10-13 20:41:25] 2025-10-13 18:40:34,581 | INFO     | architecture information:
[2025-10-13 20:41:25] 2025-10-13 18:40:34,581 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:41:25] 2025-10-13 18:40:34,645 | INFO     | cat /etc/os-release:
[2025-10-13 20:41:25] NAME="CentOS Linux"
[2025-10-13 20:41:25] VERSION="7 (Core)"
[2025-10-13 20:41:25] ID="centos"
[2025-10-13 20:41:25] ID_LIKE="rhel fedora"
[2025-10-13 20:41:25] VERSION_ID="7"
[2025-10-13 20:41:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:41:25] ANSI_COLOR="0;31"
[2025-10-13 20:41:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:41:25] HOME_URL="https://www.centos.org/"
[2025-10-13 20:41:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:41:25] 
[2025-10-13 20:41:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:41:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:41:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:41:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:41:25] 
[2025-10-13 20:41:25] 2025-10-13 18:40:34,646 | INFO     | ***************************************
[2025-10-13 20:41:25] 2025-10-13 18:40:35,152 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-13 20:41:25] 2025-10-13 18:40:35,232 | INFO     | sufficient remaining disk space (57468256256 B)
[2025-10-13 20:41:25] 2025-10-13 18:40:35,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:41:25] 2025-10-13 18:40:35,233 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:41:25] 2025-10-13 18:40:35,233 | INFO     | update_server=False
[2025-10-13 20:41:25] 2025-10-13 18:40:35,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:41:25] 2025-10-13 18:40:35,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:41:25] 2025-10-13 18:40:35,284 | INFO     | all data control threads have been joined
[2025-10-13 20:41:25] 2025-10-13 18:40:35,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:41:25] 2025-10-13 18:40:35,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:41:25] 2025-10-13 18:40:35,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:41:25] 2025-10-13 18:40:35,524 | INFO     | will abort loop
[2025-10-13 20:41:25] 2025-10-13 18:40:36,010 | INFO     | all payload control threads have been joined
[2025-10-13 20:41:25] 2025-10-13 18:40:36,241 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,291 | INFO     | [data] control thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,352 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,485 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,532 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:41:25] 2025-10-13 18:40:36,865 | INFO     | all job control threads have been joined
[2025-10-13 20:41:25] 2025-10-13 18:40:36,967 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,967 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:36,990 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:37,015 | INFO     | [payload] control thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:37,242 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:37,346 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:37,654 | INFO     | [job] validate thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:37,872 | INFO     | [job] control thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:38,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:41:25] 2025-10-13 18:40:39,154 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:40:40,747 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:41:25] 2025-10-13 18:41:05,681 | INFO     | PID=2677575 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:41:25] 2025-10-13 18:41:05,681 | INFO     | .. there are 2 such processes running
[2025-10-13 20:41:25] 2025-10-13 18:41:05,682 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:41:25] 2025-10-13 18:41:05,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:41:25] 2025-10-13 18:41:05,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:41:25] 2025-10-13 18:41:17,074 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:41:25] 2025-10-13 18:41:18,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152759404352)>', '<ExcThread(monitor, started 140152416491264)>']
[2025-10-13 20:41:25] 2025-10-13 18:41:19,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:41:25] 2025-10-13 18:41:19,764 | INFO     | [monitor] control thread has ended
[2025-10-13 20:41:25] 2025-10-13 18:41:23,816 | INFO     | all workflow threads have been joined
[2025-10-13 20:41:25] 2025-10-13 18:41:23,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:41:25] 2025-10-13 18:41:23,816 | INFO     | traces error code: 0
[2025-10-13 20:41:25] 2025-10-13 18:41:23,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:41:25] 2025-10-13 18:41:24,599 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:41:25] 2025-10-13 18:41:24,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:41:25] 2025-10-13 18:41:24,628 [wrapper] pilotpid: 2677575
[2025-10-13 20:41:25] 2025-10-13 18:41:24,638 [wrapper] Pilot exit status: 0
[2025-10-13 20:41:25] 2025-10-13 18:41:24,688 [wrapper] pandaids: 6842360907
[2025-10-13 20:41:25] 2025-10-13 18:41:24,777 [wrapper] cleanup supervisor_pilot 2756372 2677576
[2025-10-13 20:41:25] 2025-10-13 18:41:24,793 [wrapper] Test setup, not cleaning
[2025-10-13 20:41:25] 2025-10-13 18:41:24,804 [wrapper] apfmon messages muted
[2025-10-13 20:41:25] 2025-10-13 18:41:24,829 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:41:25] 2025-10-13 18:41:24,841 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:41:25]  *** Error codes and diagnostics ***
[2025-10-13 20:41:25]     "exeErrorCode": 0,
[2025-10-13 20:41:25]     "exeErrorDiag": "",
[2025-10-13 20:41:25]     "pilotErrorCode": 0,
[2025-10-13 20:41:25]     "pilotErrorDiag": "",
[2025-10-13 20:41:25]  *** Listing of results directory ***
[2025-10-13 20:41:25] total 416608
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 20:41:25] -rwx------ 1 boinc boinc     36292 Oct 13 05:43 runpilot2-wrapper.sh
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:43 queuedata.json
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:41:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:38 run_atlas
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:38 job.xml
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc 221373884 Oct 13 15:38 EVNT.46676267._004585.pool.root.1
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:38 start_atlas.sh
[2025-10-13 20:41:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:38 shared
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc    569681 Oct 13 15:38 input.tar.gz
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc      6411 Oct 13 15:38 init_data.xml
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:38 boinc_setup_complete
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:38 boinc_lockfile
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:38 pandaJob.out
[2025-10-13 20:41:25] -rw------- 1 boinc boinc    972489 Oct 13 15:38 agis_schedconf.cvmfs.json
[2025-10-13 20:41:25] drwx------ 5 boinc boinc      4096 Oct 13 15:38 pilot3
[2025-10-13 20:41:25] -rw------- 1 boinc boinc 195138284 Oct 13 20:38 HITS.46676269._096116.pool.root.1
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc       530 Oct 13 20:38 boinc_task_state.xml
[2025-10-13 20:41:25] -rw------- 1 boinc boinc      1016 Oct 13 20:40 memory_monitor_summary.json
[2025-10-13 20:41:25] -rw------- 1 boinc boinc   1560580 Oct 13 20:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:41:25] -rw------- 1 boinc boinc    583365 Oct 13 20:40 log.46676269._096116.job.log.tgz.1
[2025-10-13 20:41:25] -rw------- 1 boinc boinc      7719 Oct 13 20:40 heartbeat.json
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc        28 Oct 13 20:41 wrapper_checkpoint.txt
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:41 boinc_mmap_file
[2025-10-13 20:41:25] -rw------- 1 boinc boinc        95 Oct 13 20:41 pilot_heartbeat.json
[2025-10-13 20:41:25] -rw------- 1 boinc boinc      5078 Oct 13 20:41 pilotlog.txt
[2025-10-13 20:41:25] -rw------- 1 boinc boinc   2514559 Oct 13 20:41 log.46676269._096116.job.log.1
[2025-10-13 20:41:25] -rw------- 1 boinc boinc       357 Oct 13 20:41 output.list
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:41 runtime_log
[2025-10-13 20:41:25] -rw------- 1 boinc boinc   3112960 Oct 13 20:41 result.tar.gz
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc      8737 Oct 13 20:41 runtime_log.err
[2025-10-13 20:41:25] -rw------- 1 boinc boinc       642 Oct 13 20:41 UlrNDmbeOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkfmNDmAob5Pn.diag
[2025-10-13 20:41:25] -rw-r--r-- 1 boinc boinc     21099 Oct 13 20:41 stderr.txt
[2025-10-13 20:41:25] HITS file was successfully produced:
[2025-10-13 20:41:25] -rw------- 1 boinc boinc 195138284 Oct 13 20:38 shared/HITS.pool.root.1
[2025-10-13 20:41:25]  *** Contents of shared directory: ***
[2025-10-13 20:41:25] total 410380
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc 221373884 Oct 13 15:38 ATLAS.root_0
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:38 start_atlas.sh
[2025-10-13 20:41:25] -rw-r--r-- 2 boinc boinc    569681 Oct 13 15:38 input.tar.gz
[2025-10-13 20:41:25] -rw------- 1 boinc boinc 195138284 Oct 13 20:38 HITS.pool.root.1
[2025-10-13 20:41:25] -rw------- 1 boinc boinc   3112960 Oct 13 20:41 result.tar.gz
20:41:26 (2673896): run_atlas exited; CPU time 27047.411508
20:41:26 (2673896): called boinc_finish(0)

</stderr_txt>
]]>

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