Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:31 (2640888): wrapper (7.7.26015): starting
19:50:31 (2640888): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 19:50:31] Arguments: --nthreads 2
[2025-10-13 19:50:31] Threads: 2
[2025-10-13 19:50:31] Checking for CVMFS
[2025-10-13 19:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:50:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:50:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:50:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:50:31] 2.9.2.0 1187580 6138 62908 151668 2 57 27076764 36864001 0 130560 0 3818243 99.989 208645 847 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:50:31] CVMFS is ok
[2025-10-13 19:50:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:50:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:50:31] Further information can be found at the LHC@home message board.
[2025-10-13 19:50:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:50:31] Checking for apptainer binary...
[2025-10-13 19:50:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:50:31] Running /usr/bin/apptainer --version
[2025-10-13 19:50:31] apptainer version 1.4.1-1.1
[2025-10-13 19:50:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:50:31] thA314b
[2025-10-13 19:50:31] apptainer works
[2025-10-13 19:50:32] Set ATHENA_PROC_NUMBER=2
[2025-10-13 19:50:32] Set ATHENA_CORE_NUMBER=2
[2025-10-13 19:50:32] Starting ATLAS job with PandaID=6842378381
[2025-10-13 19:50:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:54:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:54:00] 2025-10-13 19:53:20,399 | INFO     | [job] validate thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:20,449 | INFO     | all payload control threads have been joined
[2025-10-13 21:54:00] 2025-10-13 19:53:20,587 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:20,618 | INFO     | [data] control thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:20,830 | INFO     | [job] control thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:20,864 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:21,012 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:21,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:21,455 | INFO     | [payload] control thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:23,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:29,628 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:54:00] 2025-10-13 19:53:30,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:54:00] 2025-10-13 19:53:48,727 | INFO     | 7353s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 21:54:00] 2025-10-13 19:53:49,773 | INFO     | PID=2644597 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:54:00] 2025-10-13 19:53:49,773 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:54:00] 2025-10-13 19:53:49,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:54:00] 2025-10-13 19:53:49,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:54:00] 2025-10-13 19:53:54,998 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:54:00] 2025-10-13 19:53:55,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220504069952)>', '<ExcThread(monitor, started 140219718289152)>']
[2025-10-13 21:54:00] 2025-10-13 19:53:55,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:54:00] 2025-10-13 19:53:55,805 | INFO     | [monitor] control thread has ended
[2025-10-13 21:54:00] 2025-10-13 19:54:00,376 | INFO     | all workflow threads have been joined
[2025-10-13 21:54:00] 2025-10-13 19:54:00,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:54:00] 2025-10-13 19:54:00,377 | INFO     | traces error code: 0
[2025-10-13 21:54:00] 2025-10-13 19:54:00,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:54:00] 2025-10-13 19:54:00,455 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:54:00] 2025-10-13 19:54:00,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:54:00] 2025-10-13 19:54:00,460 [wrapper] pilotpid: 2644597
[2025-10-13 21:54:00] 2025-10-13 19:54:00,462 [wrapper] Pilot exit status: 0
[2025-10-13 21:54:00] 2025-10-13 19:54:00,467 [wrapper] pandaids: 6842378381
[2025-10-13 21:54:00] 2025-10-13 19:54:00,481 [wrapper] cleanup supervisor_pilot 2666769 2644598
[2025-10-13 21:54:00] 2025-10-13 19:54:00,483 [wrapper] Test setup, not cleaning
[2025-10-13 21:54:00] 2025-10-13 19:54:00,485 [wrapper] apfmon messages muted
[2025-10-13 21:54:00] 2025-10-13 19:54:00,487 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:54:00] 2025-10-13 19:54:00,489 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:54:00]  *** Error codes and diagnostics ***
[2025-10-13 21:54:00]     "exeErrorCode": 0,
[2025-10-13 21:54:00]     "exeErrorDiag": "",
[2025-10-13 21:54:00]     "pilotErrorCode": 0,
[2025-10-13 21:54:00]     "pilotErrorDiag": "",
[2025-10-13 21:54:00]  *** Listing of results directory ***
[2025-10-13 21:54:00] total 410848
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 21:54:00] -rwx------ 1 boinc boinc     36292 Oct 13 05:46 runpilot2-wrapper.sh
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:46 queuedata.json
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:54:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:50 run_atlas
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:50 job.xml
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc 221482576 Oct 13 19:50 EVNT.46676267._000589.pool.root.1
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:50 input.tar.gz
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:50 start_atlas.sh
[2025-10-13 21:54:00] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:50 shared
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:50 boinc_setup_complete
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      6207 Oct 13 19:50 init_data.xml
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:50 boinc_lockfile
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      2549 Oct 13 19:50 pandaJob.out
[2025-10-13 21:54:00] -rw------- 1 boinc boinc    972791 Oct 13 19:50 agis_schedconf.cvmfs.json
[2025-10-13 21:54:00] -rw------- 1 boinc boinc   1560580 Oct 13 19:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:54:00] drwx------ 5 boinc boinc      4096 Oct 13 19:50 pilot3
[2025-10-13 21:54:00] -rw------- 1 boinc boinc 192652821 Oct 13 21:52 HITS.46676269._096143.pool.root.1
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:52 boinc_task_state.xml
[2025-10-13 21:54:00] -rw------- 1 boinc boinc      1014 Oct 13 21:53 memory_monitor_summary.json
[2025-10-13 21:54:00] -rw------- 1 boinc boinc    279317 Oct 13 21:53 log.46676269._096143.job.log.tgz.1
[2025-10-13 21:54:00] -rw------- 1 boinc boinc      7747 Oct 13 21:53 heartbeat.json
[2025-10-13 21:54:00] -rw------- 1 boinc boinc        95 Oct 13 21:53 pilot_heartbeat.json
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:53 wrapper_checkpoint.txt
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:53 boinc_mmap_file
[2025-10-13 21:54:00] -rw------- 1 boinc boinc      4939 Oct 13 21:54 pilotlog.txt
[2025-10-13 21:54:00] -rw------- 1 boinc boinc   1061343 Oct 13 21:54 log.46676269._096143.job.log.1
[2025-10-13 21:54:00] -rw------- 1 boinc boinc       357 Oct 13 21:54 output.list
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:54 runtime_log
[2025-10-13 21:54:00] -rw------- 1 boinc boinc   1361920 Oct 13 21:54 result.tar.gz
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      8782 Oct 13 21:54 runtime_log.err
[2025-10-13 21:54:00] -rw------- 1 boinc boinc       660 Oct 13 21:54 QlIKDm5gOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOgVMDmAV1JWo.diag
[2025-10-13 21:54:00] -rw-r--r-- 1 boinc boinc      6035 Oct 13 21:54 stderr.txt
[2025-10-13 21:54:00] HITS file was successfully produced:
[2025-10-13 21:54:00] -rw------- 1 boinc boinc 192652821 Oct 13 21:52 shared/HITS.pool.root.1
[2025-10-13 21:54:00]  *** Contents of shared directory: ***
[2025-10-13 21:54:00] total 406348
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc 221482576 Oct 13 19:50 ATLAS.root_0
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:50 input.tar.gz
[2025-10-13 21:54:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:50 start_atlas.sh
[2025-10-13 21:54:00] -rw------- 1 boinc boinc 192652821 Oct 13 21:52 HITS.pool.root.1
[2025-10-13 21:54:00] -rw------- 1 boinc boinc   1361920 Oct 13 21:54 result.tar.gz
21:54:01 (2640888): run_atlas exited; CPU time 14246.797955
21:54:01 (2640888): called boinc_finish(0)

</stderr_txt>
]]>

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