Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:34:45 (28337): wrapper (7.7.26015): starting
04:34:45 (28337): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:34:45] Arguments: --nthreads 8
[2025-10-13 04:34:45] Threads: 8
[2025-10-13 04:34:45] Checking for CVMFS
[2025-10-13 04:34:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:34:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:34:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:34:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:34:45] 2.11.2.0 26356 43988 120156 151654 0 59 12087366 18432001 1833 130560 0 45036306 99.974 2181656 18404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:34:45] CVMFS is ok
[2025-10-13 04:34:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:34:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:34:45] Further information can be found at the LHC@home message board.
[2025-10-13 04:34:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:34:45] Checking for apptainer binary...
[2025-10-13 04:34:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:34:45] Running /usr/bin/apptainer --version
[2025-10-13 04:34:45] apptainer version 1.3.2-1.el7
[2025-10-13 04:34:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:34:46] c-206-6.aglt2.org
[2025-10-13 04:34:46] apptainer works
[2025-10-13 04:34:46] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:34:46] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:34:46] Starting ATLAS job with PandaID=6842378370
[2025-10-13 04:34:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:37:19]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:37:19] 2025-10-13 11:36:32,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:37:19] 2025-10-13 11:36:32,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:37:19] 2025-10-13 11:36:32,251 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:37:19] 2025-10-13 11:36:32,251 | INFO     | sum of square deviations: 1778377530.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,252 | INFO     | sum of deviations: 2047031594.999998
[2025-10-13 07:37:19] 2025-10-13 11:36:32,252 | INFO     | mean x: 1760349948.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,252 | INFO     | mean y: 2470268.6983240223
[2025-10-13 07:37:19] 2025-10-13 11:36:32,252 | INFO     | -- intersect: -2023810372.5177195
[2025-10-13 07:37:19] 2025-10-13 11:36:32,252 | INFO     | intersect: -2023810372.5177195
[2025-10-13 07:37:19] 2025-10-13 11:36:32,253 | INFO     | chi2: 1.949800887750445
[2025-10-13 07:37:19] 2025-10-13 11:36:32,253 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 07:37:19] 2025-10-13 11:36:32,254 | INFO     | sum of deviations: 13548250700.499998
[2025-10-13 07:37:19] 2025-10-13 11:36:32,254 | INFO     | mean x: 1760349795.5
[2025-10-13 07:37:19] 2025-10-13 11:36:32,254 | INFO     | mean y: 2482092.224137931
[2025-10-13 07:37:19] 2025-10-13 11:36:32,254 | INFO     | -- intersect: -14598106857.094118
[2025-10-13 07:37:19] 2025-10-13 11:36:32,254 | INFO     | intersect: -14598106857.094118
[2025-10-13 07:37:19] 2025-10-13 11:36:32,255 | INFO     | chi2: 1.177163820144529
[2025-10-13 07:37:19] 2025-10-13 11:36:32,255 | INFO     | current chi2=1.177163820144529 (change=39.62645993547244 %)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,255 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | sum of deviations: 13093528549.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | mean x: 1760349643.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | mean y: 2481585.224852071
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | -- intersect: -15397929168.445179
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | intersect: -15397929168.445179
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | chi2: 1.1779975311674706
[2025-10-13 07:37:19] 2025-10-13 11:36:32,256 | INFO     | current chi2=1.1779975311674706 (change=-0.07082370428606599 %)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,257 | INFO     | right removable region: 168
[2025-10-13 07:37:19] 2025-10-13 11:36:32,257 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | sum of deviations: -18574459587.500004
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | mean x: 1760350100.5
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | mean y: 2491627.3735632184
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | -- intersect: 20019695499.37255
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | intersect: 20019695499.37255
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | chi2: 0.8160897555144151
[2025-10-13 07:37:19] 2025-10-13 11:36:32,258 | INFO     | current chi2=0.8160897555144151 (change=58.144969538096426 %)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,259 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | sum of deviations: -17976589956.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | mean x: 1760350253.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | mean y: 2490927.650887574
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | -- intersect: 21146292170.39479
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | intersect: 21146292170.39479
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | chi2: 0.8078518036613987
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | current chi2=0.8078518036613987 (change=1.009441890104799 %)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,260 | INFO     | left removable region: 20
[2025-10-13 07:37:19] 2025-10-13 11:36:32,261 | INFO     | sum of square deviations: 1005179777.0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,261 | INFO     | sum of deviations: -4150630075.999997
[2025-10-13 07:37:19] 2025-10-13 11:36:32,261 | INFO     | mean x: 1760350222.5
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | mean y: 2501085.189189189
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | -- intersect: 7271412323.7424755
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | intersect: 7271412323.7424755
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | chi2: 0.013468435120099606
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | -- intersect: 7271412323.7424755
[2025-10-13 07:37:19] 2025-10-13 11:36:32,262 | INFO     | current memory leak: -4.13 B/s (using 148 data points, chi2=0.01)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | could have reported an average CPU frequency of 2463 MHz (9 samples)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | ..............................
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . Timing measurements:
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . get job = 0 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . initial setup = 2 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . payload setup = 4 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . stage-in = 0 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . payload execution = 10865 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . stage-out = 2 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,263 | INFO     | . log creation = 0 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,264 | INFO     | ..............................
[2025-10-13 07:37:19] 2025-10-13 11:36:32,340 | INFO     | 
[2025-10-13 07:37:19] 2025-10-13 11:36:32,340 | INFO     | job summary report
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | --------------------------------------------------
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | PanDA job id: 6842378370
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | task id: 46676269
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | errors: (none)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | pilot state: finished 
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | transexitcode: 0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | exeerrorcode: 0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | exeerrordiag: 
[2025-10-13 07:37:19] 2025-10-13 11:36:32,341 | INFO     | exitcode: 0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | exitmsg: OK
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | cpuconsumptiontime: 83133 s
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | nevents: 400
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | neventsw: 0
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | pid: 6307
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | pgrp: 6307
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | corecount: 8
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | event service: False
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | sizes: {0: 2348807, 3: 2349069, 11: 2349097, 10873: 2378170, 10874: 2378169, 10876: 2387407, 10881: 2387609}
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | --------------------------------------------------
[2025-10-13 07:37:19] 2025-10-13 11:36:32,342 | INFO     | 
[2025-10-13 07:37:19] 2025-10-13 11:36:32,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:37:19] 2025-10-13 11:36:32,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | job 6842378370 has completed (purged errors)
[2025-10-13 07:37:19] 2025-10-13 11:36:32,360 | INFO     | overall cleanup function is called
[2025-10-13 07:37:19] 2025-10-13 11:36:33,364 | INFO     | --- collectZombieJob: --- 10, [6307]
[2025-10-13 07:37:19] 2025-10-13 11:36:33,364 | INFO     | zombie collector waiting for pid 6307
[2025-10-13 07:37:19] 2025-10-13 11:36:33,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:37:19] 2025-10-13 11:36:33,364 | INFO     | collected zombie processes
[2025-10-13 07:37:19] 2025-10-13 11:36:33,364 | INFO     | will attempt to kill all subprocesses of pid=6307
[2025-10-13 07:37:19] 2025-10-13 11:36:33,491 | INFO     | process IDs to be killed: [6307] (in reverse order)
[2025-10-13 07:37:19] 2025-10-13 11:36:33,531 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:37:19] 2025-10-13 11:36:33,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:37:19] 2025-10-13 11:36:33,534 | INFO     | did not find any defunct processes belonging to 6307
[2025-10-13 07:37:19] 2025-10-13 11:36:33,537 | INFO     | did not find any defunct processes belonging to 6307
[2025-10-13 07:37:19] 2025-10-13 11:36:33,537 | INFO     | ready for new job
[2025-10-13 07:37:19] 2025-10-13 11:36:33,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:37:19] 2025-10-13 11:36:33,539 | INFO     | ***************************************
[2025-10-13 07:37:19] 2025-10-13 11:36:33,539 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:37:19] 2025-10-13 11:36:33,540 | INFO     | ***************************************
[2025-10-13 07:37:19] 2025-10-13 11:36:33,540 | INFO     | 
[2025-10-13 07:37:19] 2025-10-13 11:36:33,541 | INFO     | architecture information:
[2025-10-13 07:37:19] 2025-10-13 11:36:33,541 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:37:19] 2025-10-13 11:36:33,550 | INFO     | cat /etc/os-release:
[2025-10-13 07:37:19] NAME="CentOS Linux"
[2025-10-13 07:37:19] VERSION="7 (Core)"
[2025-10-13 07:37:19] ID="centos"
[2025-10-13 07:37:19] ID_LIKE="rhel fedora"
[2025-10-13 07:37:19] VERSION_ID="7"
[2025-10-13 07:37:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:37:19] ANSI_COLOR="0;31"
[2025-10-13 07:37:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:37:19] HOME_URL="https://www.centos.org/"
[2025-10-13 07:37:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:37:19] 
[2025-10-13 07:37:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:37:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:37:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:37:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:37:19] 
[2025-10-13 07:37:19] 2025-10-13 11:36:33,550 | INFO     | ***************************************
[2025-10-13 07:37:19] 2025-10-13 11:36:34,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:37:19] 2025-10-13 11:36:34,064 | INFO     | sufficient remaining disk space (27927773184 B)
[2025-10-13 07:37:19] 2025-10-13 11:36:34,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:37:19] 2025-10-13 11:36:34,064 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:37:19] 2025-10-13 11:36:34,064 | INFO     | update_server=False
[2025-10-13 07:37:19] 2025-10-13 11:36:34,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:37:19] 2025-10-13 11:36:34,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:37:19] 2025-10-13 11:36:34,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:37:19] 2025-10-13 11:36:34,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:37:19] 2025-10-13 11:36:34,065 | INFO     | aborting loop
[2025-10-13 07:37:19] 2025-10-13 11:36:34,127 | INFO     | all job control threads have been joined
[2025-10-13 07:37:19] 2025-10-13 11:36:34,336 | INFO     | all payload control threads have been joined
[2025-10-13 07:37:19] 2025-10-13 11:36:34,418 | INFO     | all data control threads have been joined
[2025-10-13 07:37:19] 2025-10-13 11:36:34,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:37:19] 2025-10-13 11:36:35,070 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,071 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,072 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,132 | INFO     | [job] control thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,341 | INFO     | [payload] control thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,423 | INFO     | [data] control thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,457 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,524 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,562 | INFO     | [job] validate thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:35,566 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:36,008 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:36,144 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:36,656 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:37,003 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:38,071 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:36:44,144 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:37:19] 2025-10-13 11:36:45,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:37:19] 2025-10-13 11:37:03,670 | INFO     | PID=32030 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:37:19] 2025-10-13 11:37:03,670 | INFO     | .. there are 3 such processes running
[2025-10-13 07:37:19] 2025-10-13 11:37:03,671 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:37:19] 2025-10-13 11:37:03,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:37:19] 2025-10-13 11:37:03,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:37:19] 2025-10-13 11:37:14,003 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:37:19] 2025-10-13 11:37:14,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131036710720)>', '<ExcThread(monitor, started 140130597717760)>']
[2025-10-13 07:37:19] 2025-10-13 11:37:14,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:37:19] 2025-10-13 11:37:14,723 | INFO     | [monitor] control thread has ended
[2025-10-13 07:37:19] 2025-10-13 11:37:19,213 | INFO     | all workflow threads have been joined
[2025-10-13 07:37:19] 2025-10-13 11:37:19,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:37:19] 2025-10-13 11:37:19,213 | INFO     | traces error code: 0
[2025-10-13 07:37:19] 2025-10-13 11:37:19,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:37:19] 2025-10-13 11:37:19,311 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:37:19] 2025-10-13 11:37:19,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:37:19] 2025-10-13 11:37:19,315 [wrapper] pilotpid: 32030
[2025-10-13 07:37:19] 2025-10-13 11:37:19,317 [wrapper] Pilot exit status: 0
[2025-10-13 07:37:19] 2025-10-13 11:37:19,324 [wrapper] pandaids: 6842378370
[2025-10-13 07:37:19] 2025-10-13 11:37:19,352 [wrapper] cleanup supervisor_pilot  4062 32031
[2025-10-13 07:37:19] 2025-10-13 11:37:19,354 [wrapper] Test setup, not cleaning
[2025-10-13 07:37:19] 2025-10-13 11:37:19,357 [wrapper] apfmon messages muted
[2025-10-13 07:37:19] 2025-10-13 11:37:19,359 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:37:19] 2025-10-13 11:37:19,361 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:37:19]  *** Error codes and diagnostics ***
[2025-10-13 07:37:19]     "exeErrorCode": 0,
[2025-10-13 07:37:19]     "exeErrorDiag": "",
[2025-10-13 07:37:19]     "pilotErrorCode": 0,
[2025-10-13 07:37:19]     "pilotErrorDiag": "",
[2025-10-13 07:37:19]  *** Listing of results directory ***
[2025-10-13 07:37:19] total 409132
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 07:37:19] -rwx------ 1 boincer umatlas     36292 Oct 12 23:46 runpilot2-wrapper.sh
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:46 queuedata.json
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:37:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:34 run_atlas
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:34 job.xml
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas 217956225 Oct 13 04:34 EVNT.46676267._003864.pool.root.1
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:34 start_atlas.sh
[2025-10-13 07:37:19] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:34 shared
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas    569687 Oct 13 04:34 input.tar.gz
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:34 boinc_lockfile
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:34 pandaJob.out
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas    972857 Oct 13 04:34 agis_schedconf.cvmfs.json
[2025-10-13 07:37:19] drwx------ 5 boincer umatlas      4096 Oct 13 04:34 pilot3
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 07:27 init_data.xml
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas 193246525 Oct 13 07:35 HITS.46676269._096142.pool.root.1
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas       530 Oct 13 07:35 boinc_task_state.xml
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas      1056 Oct 13 07:36 memory_monitor_summary.json
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas   1560580 Oct 13 07:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas    404974 Oct 13 07:36 log.46676269._096142.job.log.tgz.1
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas      7859 Oct 13 07:36 heartbeat.json
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas        95 Oct 13 07:37 pilot_heartbeat.json
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:37 boinc_mmap_file
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas      4893 Oct 13 07:37 pilotlog.txt
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas        28 Oct 13 07:37 wrapper_checkpoint.txt
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas   1521850 Oct 13 07:37 log.46676269._096142.job.log.1
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas       357 Oct 13 07:37 output.list
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:37 runtime_log
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas   1945600 Oct 13 07:37 result.tar.gz
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 07:37 runtime_log.err
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas       661 Oct 13 07:37 MhGKDm5gOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNgVMDmTVH48m.diag
[2025-10-13 07:37:19] -rw-r--r-- 1 boincer umatlas     20854 Oct 13 07:37 stderr.txt
[2025-10-13 07:37:19] HITS file was successfully produced:
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas 193246525 Oct 13 07:35 shared/HITS.pool.root.1
[2025-10-13 07:37:19]  *** Contents of shared directory: ***
[2025-10-13 07:37:19] total 404048
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas 217956225 Oct 13 04:34 ATLAS.root_0
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:34 start_atlas.sh
[2025-10-13 07:37:19] -rw-r--r-- 2 boincer umatlas    569687 Oct 13 04:34 input.tar.gz
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas 193246525 Oct 13 07:35 HITS.pool.root.1
[2025-10-13 07:37:19] -rw------- 1 boincer umatlas   1945600 Oct 13 07:37 result.tar.gz
07:37:21 (28337): run_atlas exited; CPU time 83266.285977
07:37:21 (28337): called boinc_finish(0)

</stderr_txt>
]]>

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