Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:42:18 (4013185): wrapper (7.7.26015): starting
21:42:18 (4013185): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 21:42:18] Arguments: --nthreads 3
[2025-10-13 21:42:18] Threads: 3
[2025-10-13 21:42:18] Checking for CVMFS
[2025-10-13 21:42:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 21:42:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 21:42:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 21:42:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 21:42:19] 2.9.2.0 2117043 6279 85700 151671 1 57 33860436 36864000 0 130560 0 4989788 99.991 217395 815 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 21:42:19] CVMFS is ok
[2025-10-13 21:42:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:42:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:42:19] Further information can be found at the LHC@home message board.
[2025-10-13 21:42:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:42:19] Checking for apptainer binary...
[2025-10-13 21:42:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 21:42:19] Running /usr/bin/apptainer --version
[2025-10-13 21:42:19] apptainer version 1.4.1-1.1
[2025-10-13 21:42:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:42:19] cosA127b
[2025-10-13 21:42:19] apptainer works
[2025-10-13 21:42:19] Set ATHENA_PROC_NUMBER=3
[2025-10-13 21:42:19] Set ATHENA_CORE_NUMBER=3
[2025-10-13 21:42:19] Starting ATLAS job with PandaID=6842376559
[2025-10-13 21:42:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:05:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:05:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/8c/log.46676269._096141.job.log.tgz.1
[2025-10-13 23:05:46]  workdir=None
[2025-10-13 23:05:46] ]
[2025-10-13 23:05:46] 2025-10-13 21:05:08,863 | INFO     | transferring file log.46676269._096141.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6842376559/log.46676269._096141.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 23:05:46] 2025-10-13 21:05:08,863 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6842376559/log.46676269._096141.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0961
[2025-10-13 23:05:46] 2025-10-13 21:05:08,875 | INFO     | adding to output.list: log.46676269._096141.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/8c/log.46676269._096141.job.log.tg
[2025-10-13 23:05:46] 2025-10-13 21:05:08,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 23:05:46] 2025-10-13 21:05:08,875 | INFO     | summary of transferred files:
[2025-10-13 23:05:46] 2025-10-13 21:05:08,875 | INFO     |  -- lfn=log.46676269._096141.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 23:05:46] 2025-10-13 21:05:08,875 | INFO     | stage-out finished correctly
[2025-10-13 23:05:46] 2025-10-13 21:05:08,950 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 23:05:46] 2025-10-13 21:05:09,254 | INFO     | time since job start (4965s) is within the limit (172800.0s)
[2025-10-13 23:05:46] 2025-10-13 21:05:09,387 | INFO     | job 6842376559 has state=finished
[2025-10-13 23:05:46] 2025-10-13 21:05:09,387 | INFO     | preparing for final server update for job 6842376559 in state='finished'
[2025-10-13 23:05:46] 2025-10-13 21:05:09,387 | INFO     | this job has now completed (state=finished)
[2025-10-13 23:05:46] 2025-10-13 21:05:09,387 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 23:05:46] 2025-10-13 21:05:09,387 | INFO     | log transfer has been attempted: DONE
[2025-10-13 23:05:46] 2025-10-13 21:05:09,388 | INFO     | job 6842376559 has finished - writing final server update
[2025-10-13 23:05:46] 2025-10-13 21:05:09,388 | INFO     | total number of processed events: 400 (read)
[2025-10-13 23:05:46] 2025-10-13 21:05:09,388 | INFO     | executing command: lscpu
[2025-10-13 23:05:46] 2025-10-13 21:05:09,404 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 23:05:46] 2025-10-13 21:05:11,260 | INFO     | time since job start (4967s) is within the limit (172800.0s)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,265 | INFO     | time since job start (4969s) is within the limit (172800.0s)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,824 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 23:05:46] 2025-10-13 21:05:13,826 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3591.73075
[2025-10-13 23:05:46] 2025-10-13 21:05:13,826 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6842376559/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,827 | INFO     | extracted standard info from prmon json
[2025-10-13 23:05:46] 2025-10-13 21:05:13,827 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 23:05:46] 2025-10-13 21:05:13,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 23:05:46] 2025-10-13 21:05:13,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 23:05:46] 2025-10-13 21:05:13,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | fitting pss+swap vs Time
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | sum of deviations: -10937102970.000002
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | mean x: 1760387095.5
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | mean y: 2457766.945945946
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | -- intersect: 153258007404.46045
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | intersect: 153258007404.46045
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | chi2: 0.07089878057631217
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | -- intersect: 153258007404.46045
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | current memory leak: -87.06 B/s (using 74 data points, chi2=0.07)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | could have reported an average CPU frequency of 3793 MHz (6 samples)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,828 | INFO     | ..............................
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . Timing measurements:
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . get job = 0 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . initial setup = 1 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . payload setup = 2 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . stage-in = 0 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . payload execution = 4943 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . stage-out = 0 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | . log creation = 0 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,829 | INFO     | ..............................
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | 
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | job summary report
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | --------------------------------------------------
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | PanDA job id: 6842376559
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | task id: 46676269
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | errors: (none)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | pilot state: finished 
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | transexitcode: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | exeerrorcode: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | exeerrordiag: 
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | exitcode: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | exitmsg: OK
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | cpuconsumptiontime: 14257 s
[2025-10-13 23:05:46] 2025-10-13 21:05:13,860 | INFO     | nevents: 400
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | neventsw: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | pid: 4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | pgrp: 4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | corecount: 3
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | event service: False
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | sizes: {0: 2348810, 3: 2349072, 11: 2349100, 4950: 2375542, 4951: 2384602, 4956: 2384740}
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | --------------------------------------------------
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | 
[2025-10-13 23:05:46] 2025-10-13 21:05:13,861 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | job 6842376559 has completed (purged errors)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,874 | INFO     | overall cleanup function is called
[2025-10-13 23:05:46] 2025-10-13 21:05:13,906 | WARNING  | process 4023339 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 23:05:46] 2025-10-13 21:05:13,937 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,937 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,937 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 23:05:46] 2025-10-13 21:05:13,937 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 23:05:46] 2025-10-13 21:05:13,938 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6842376559/payload.stdout) since it has not been created yet
[2025-10-13 23:05:46] 2025-10-13 21:05:13,938 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 23:05:46] 2025-10-13 21:05:13,947 | INFO     | sufficient remaining disk space (327407370240 B)
[2025-10-13 23:05:46] 2025-10-13 21:05:13,947 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-13 23:05:46] 2025-10-13 21:05:13,948 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6842376559/HITS.46676269._096141.pool.root.1 since it does not exist
[2025-10-13 23:05:46] 2025-10-13 21:05:13,986 | INFO     | number of running child processes to parent process 4023339: 1
[2025-10-13 23:05:46] 2025-10-13 21:05:13,986 | INFO     | maximum number of monitored processes: 6
[2025-10-13 23:05:46] 2025-10-13 21:05:13,986 | INFO     | aborting job monitoring since job object (job id=6842376559) has expired
[2025-10-13 23:05:46] 2025-10-13 21:05:14,881 | INFO     | --- collectZombieJob: --- 10, [4023339]
[2025-10-13 23:05:46] 2025-10-13 21:05:14,881 | INFO     | zombie collector waiting for pid 4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:14,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:05:46] 2025-10-13 21:05:14,881 | INFO     | collected zombie processes
[2025-10-13 23:05:46] 2025-10-13 21:05:14,881 | INFO     | will attempt to kill all subprocesses of pid=4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:14,922 | INFO     | process IDs to be killed: [4023339] (in reverse order)
[2025-10-13 23:05:46] 2025-10-13 21:05:14,945 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:05:46] 2025-10-13 21:05:14,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:05:46] 2025-10-13 21:05:14,947 | INFO     | did not find any defunct processes belonging to 4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | did not find any defunct processes belonging to 4023339
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | ready for new job
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | ***************************************
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:05:46] 2025-10-13 21:05:14,948 | INFO     | ***************************************
[2025-10-13 23:05:46] 2025-10-13 21:05:14,949 | INFO     | 
[2025-10-13 23:05:46] 2025-10-13 21:05:14,949 | INFO     | architecture information:
[2025-10-13 23:05:46] 2025-10-13 21:05:14,949 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:05:46] 2025-10-13 21:05:14,957 | INFO     | cat /etc/os-release:
[2025-10-13 23:05:46] NAME="CentOS Linux"
[2025-10-13 23:05:46] VERSION="7 (Core)"
[2025-10-13 23:05:46] ID="centos"
[2025-10-13 23:05:46] ID_LIKE="rhel fedora"
[2025-10-13 23:05:46] VERSION_ID="7"
[2025-10-13 23:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:05:46] ANSI_COLOR="0;31"
[2025-10-13 23:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:05:46] HOME_URL="https://www.centos.org/"
[2025-10-13 23:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:05:46] 
[2025-10-13 23:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:05:46] 
[2025-10-13 23:05:46] 2025-10-13 21:05:14,957 | INFO     | ***************************************
[2025-10-13 23:05:46] 2025-10-13 21:05:15,460 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 23:05:46] 2025-10-13 21:05:15,472 | INFO     | sufficient remaining disk space (327408418816 B)
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | INFO     | update_server=False
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:05:46] 2025-10-13 21:05:15,473 | INFO     | aborting loop
[2025-10-13 23:05:46] 2025-10-13 21:05:15,903 | INFO     | all payload control threads have been joined
[2025-10-13 23:05:46] 2025-10-13 21:05:16,102 | INFO     | all job control threads have been joined
[2025-10-13 23:05:46] 2025-10-13 21:05:16,145 | INFO     | all data control threads have been joined
[2025-10-13 23:05:46] 2025-10-13 21:05:16,478 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:16,479 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:16,479 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:16,537 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:16,909 | INFO     | [payload] control thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:16,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:05:46] 2025-10-13 21:05:16,979 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,107 | INFO     | [job] control thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,150 | INFO     | [data] control thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,370 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,563 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,948 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:17,956 | INFO     | [job] validate thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:18,074 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:18,919 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:19,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:26,220 | INFO     | job.realtimelogging is not enabled
[2025-10-13 23:05:46] 2025-10-13 21:05:27,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:05:46] 2025-10-13 21:05:29,832 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:05:46] 2025-10-13 21:05:31,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635252201280)>', '<ExcThread(monitor, started 140634904045312)>']
[2025-10-13 23:05:46] 2025-10-13 21:05:36,535 | INFO     | all workflow threads have been joined
[2025-10-13 23:05:46] 2025-10-13 21:05:36,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:05:46] 2025-10-13 21:05:36,535 | INFO     | traces error code: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:36,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:05:46] 2025-10-13 21:05:46,375 | INFO     | PID=4016901 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 23:05:46] 2025-10-13 21:05:46,375 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:05:46] 2025-10-13 21:05:46,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:05:46] 2025-10-13 21:05:46,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:05:46] 2025-10-13 21:05:46,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:05:46] 2025-10-13 21:05:46,376 | INFO     | [monitor] control thread has ended
[2025-10-13 23:05:46] 2025-10-13 21:05:46,425 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:05:46] 2025-10-13 21:05:46,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:05:46] 2025-10-13 21:05:46,430 [wrapper] pilotpid: 4016901
[2025-10-13 23:05:46] 2025-10-13 21:05:46,432 [wrapper] Pilot exit status: 0
[2025-10-13 23:05:46] 2025-10-13 21:05:46,439 [wrapper] pandaids: 6842376559
[2025-10-13 23:05:46] 2025-10-13 21:05:46,454 [wrapper] cleanup supervisor_pilot 4035843 4016902
[2025-10-13 23:05:46] 2025-10-13 21:05:46,457 [wrapper] Test setup, not cleaning
[2025-10-13 23:05:46] 2025-10-13 21:05:46,459 [wrapper] apfmon messages muted
[2025-10-13 23:05:46] 2025-10-13 21:05:46,461 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:05:46] 2025-10-13 21:05:46,463 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:05:46]  *** Error codes and diagnostics ***
[2025-10-13 23:05:46]     "exeErrorCode": 0,
[2025-10-13 23:05:46]     "exeErrorDiag": "",
[2025-10-13 23:05:46]     "pilotErrorCode": 0,
[2025-10-13 23:05:46]     "pilotErrorDiag": "",
[2025-10-13 23:05:46]  *** Listing of results directory ***
[2025-10-13 23:05:46] total 413968
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 23:05:46] -rwx------ 1 boinc boinc     36292 Oct 13 05:46 runpilot2-wrapper.sh
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:46 queuedata.json
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc       100 Oct 13 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:05:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 21:42 run_atlas
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc       105 Oct 13 21:42 job.xml
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc 221056968 Oct 13 21:42 EVNT.46676267._004352.pool.root.1
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc    569683 Oct 13 21:42 input.tar.gz
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:42 start_atlas.sh
[2025-10-13 23:05:46] drwxrwx--x 2 boinc boinc      4096 Oct 13 21:42 shared
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:42 boinc_setup_complete
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc      6441 Oct 13 21:42 init_data.xml
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:42 boinc_lockfile
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc      2550 Oct 13 21:42 pandaJob.out
[2025-10-13 23:05:46] -rw------- 1 boinc boinc    972799 Oct 13 21:42 agis_schedconf.cvmfs.json
[2025-10-13 23:05:46] -rw------- 1 boinc boinc   1560580 Oct 13 21:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:05:46] drwx------ 5 boinc boinc      4096 Oct 13 21:42 pilot3
[2025-10-13 23:05:46] -rw------- 1 boinc boinc        95 Oct 13 23:04 pilot_heartbeat.json
[2025-10-13 23:05:46] -rw------- 1 boinc boinc 196997220 Oct 13 23:04 HITS.46676269._096141.pool.root.1
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc       529 Oct 13 23:04 boinc_task_state.xml
[2025-10-13 23:05:46] -rw------- 1 boinc boinc      1018 Oct 13 23:05 memory_monitor_summary.json
[2025-10-13 23:05:46] -rw------- 1 boinc boinc    242161 Oct 13 23:05 log.46676269._096141.job.log.tgz.1
[2025-10-13 23:05:46] -rw------- 1 boinc boinc      7766 Oct 13 23:05 heartbeat.json
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc      8192 Oct 13 23:05 boinc_mmap_file
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc        27 Oct 13 23:05 wrapper_checkpoint.txt
[2025-10-13 23:05:46] -rw------- 1 boinc boinc       747 Oct 13 23:05 pilotlog.txt
[2025-10-13 23:05:46] -rw------- 1 boinc boinc    729806 Oct 13 23:05 log.46676269._096141.job.log.1
[2025-10-13 23:05:46] -rw------- 1 boinc boinc       357 Oct 13 23:05 output.list
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:05 runtime_log
[2025-10-13 23:05:46] -rw------- 1 boinc boinc    993280 Oct 13 23:05 result.tar.gz
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc      8787 Oct 13 23:05 runtime_log.err
[2025-10-13 23:05:46] -rw------- 1 boinc boinc       660 Oct 13 23:05 F1QODm4gOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMgVMDmEa3F9n.diag
[2025-10-13 23:05:46] -rw-r--r-- 1 boinc boinc     22403 Oct 13 23:05 stderr.txt
[2025-10-13 23:05:46] HITS file was successfully produced:
[2025-10-13 23:05:46] -rw------- 1 boinc boinc 196997220 Oct 13 23:04 shared/HITS.pool.root.1
[2025-10-13 23:05:46]  *** Contents of shared directory: ***
[2025-10-13 23:05:46] total 409816
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc 221056968 Oct 13 21:42 ATLAS.root_0
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc    569683 Oct 13 21:42 input.tar.gz
[2025-10-13 23:05:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:42 start_atlas.sh
[2025-10-13 23:05:46] -rw------- 1 boinc boinc 196997220 Oct 13 23:04 HITS.pool.root.1
[2025-10-13 23:05:46] -rw------- 1 boinc boinc    993280 Oct 13 23:05 result.tar.gz
23:05:48 (4013185): run_atlas exited; CPU time 14274.799343
23:05:48 (4013185): called boinc_finish(0)

</stderr_txt>
]]>

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