Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:30:58 (888385): wrapper (7.7.26015): starting
10:30:58 (888385): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 10:30:58] Arguments: --nthreads 12
[2025-10-13 10:30:58] Threads: 12
[2025-10-13 10:30:58] Checking for CVMFS
[2025-10-13 10:30:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:31:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:31:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:31:03] 2.13.2.0 888219 0 25376 151654 3 1 2025937 4096001 0 130560 0 0 0.000 1291 1857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:31:03] CVMFS is ok
[2025-10-13 10:31:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:31:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:31:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:31:04] Further information can be found at the LHC@home message board.
[2025-10-13 10:31:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:31:04] Checking for apptainer binary...
[2025-10-13 10:31:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:31:04] Running /usr/bin/apptainer --version
[2025-10-13 10:31:04] apptainer version 1.4.3
[2025-10-13 10:31:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:31:04] 9628
[2025-10-13 10:31:04] apptainer works
[2025-10-13 10:31:04] Set ATHENA_PROC_NUMBER=12
[2025-10-13 10:31:04] Set ATHENA_CORE_NUMBER=12
[2025-10-13 10:31:04] Starting ATLAS job with PandaID=6839822893
[2025-10-13 10:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:10:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:10:12] 2025-10-13 16:09:13,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:10:12] 2025-10-13 16:09:13,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:10:12] 2025-10-13 16:09:13,570 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:10:12] 2025-10-13 16:09:13,571 | INFO     | sum of square deviations: 28255967600.819958
[2025-10-13 18:10:12] 2025-10-13 16:09:13,573 | INFO     | sum of deviations: 90506321395.48003
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | mean x: 1760358008.3133333
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | mean y: 2637334.053333333
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | -- intersect: -5635942449.244912
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | intersect: -5635942449.244912
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | chi2: 1.4775243359445585
[2025-10-13 18:10:12] 2025-10-13 16:09:13,574 | INFO     | sum of square deviations: 27324629204.975307
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | sum of deviations: 88909006866.73718
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | mean x: 1760357855.8224719
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | mean y: 2637072.566292135
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | -- intersect: -5725223588.127945
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | intersect: -5725223588.127945
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | chi2: 1.4777184897877569
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | current chi2=1.4777184897877569 (change=-0.013140483609991484 %)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,577 | INFO     | right removable region: 444
[2025-10-13 18:10:12] 2025-10-13 16:09:13,578 | INFO     | sum of square deviations: 27324405944.975307
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | sum of deviations: 18442289993.453915
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | mean x: 1760358160.8224719
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | mean y: 2649066.7146067414
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | -- intersect: -1185484199.9191813
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | intersect: -1185484199.9191813
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | chi2: 0.0046490760143692135
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | current chi2=0.0046490760143692135 (change=99.68534690757583 %)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,580 | INFO     | sum of square deviations: 26413542351.554523
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | sum of deviations: 15166642426.636366
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | mean x: 1760358313.331818
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | mean y: 2649614.4545454546
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | -- intersect: -1008147223.2323571
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | intersect: -1008147223.2323571
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | chi2: 0.003415867933166373
[2025-10-13 18:10:12] 2025-10-13 16:09:13,583 | INFO     | current chi2=0.003415867933166373 (change=26.525874762883657 %)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,584 | INFO     | sum of square deviations: 25523278461.411392
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | sum of deviations: 14117903977.84368
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | mean x: 1760358465.829885
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | mean y: 2649793.673563218
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | -- intersect: -971071972.7031622
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | intersect: -971071972.7031622
[2025-10-13 18:10:12] 2025-10-13 16:09:13,586 | INFO     | chi2: 0.0033415069755504713
[2025-10-13 18:10:12] 2025-10-13 16:09:13,587 | INFO     | current chi2=0.0033415069755504713 (change=2.1769271842712072 %)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,587 | INFO     | left removable region: 30
[2025-10-13 18:10:12] 2025-10-13 16:09:13,587 | INFO     | sum of square deviations: 22002504460.33095
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | sum of deviations: 15011687150.975845
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | mean x: 1760358740.335749
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | mean y: 2649317.690821256
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | -- intersect: -1198393714.9807742
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | intersect: -1198393714.9807742
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | chi2: 0.0025902635694619322
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | -- intersect: -1198393714.9807742
[2025-10-13 18:10:12] 2025-10-13 16:09:13,589 | INFO     | current memory leak: 0.68 B/s (using 414 data points, chi2=0.00)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | could have reported an average CPU frequency of 2396 MHz (18 samples)
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | ..............................
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . Timing measurements:
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . get job = 0 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . initial setup = 1 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . payload setup = 5 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . stage-in = 0 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . payload execution = 27440 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . stage-out = 1 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | . log creation = 0 s
[2025-10-13 18:10:12] 2025-10-13 16:09:13,590 | INFO     | ..............................
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | 
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | job summary report
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | --------------------------------------------------
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | PanDA job id: 6839822893
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | task id: 46676269
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | errors: (none)
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | pilot state: finished 
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | transexitcode: 0
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | exeerrorcode: 0
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | exeerrordiag: 
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | exitcode: 0
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | exitmsg: OK
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | cpuconsumptiontime: 26906 s
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | nevents: 400
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | neventsw: 0
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | pid: 979530
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | pgrp: 979530
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | corecount: 12
[2025-10-13 18:10:12] 2025-10-13 16:09:14,086 | INFO     | event service: False
[2025-10-13 18:10:12] 2025-10-13 16:09:14,087 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 27449: 2386405, 27451: 2395403, 27454: 2395459, 27459: 2395781}
[2025-10-13 18:10:12] 2025-10-13 16:09:14,087 | INFO     | --------------------------------------------------
[2025-10-13 18:10:12] 2025-10-13 16:09:14,087 | INFO     | 
[2025-10-13 18:10:12] 2025-10-13 16:09:14,087 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 18:10:12] 2025-10-13 16:09:14,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:10:12] 2025-10-13 16:09:14,107 | INFO     | job 6839822893 has completed (purged errors)
[2025-10-13 18:10:12] 2025-10-13 16:09:14,108 | INFO     | overall cleanup function is called
[2025-10-13 18:10:12] 2025-10-13 16:09:15,115 | INFO     | --- collectZombieJob: --- 10, [979530]
[2025-10-13 18:10:12] 2025-10-13 16:09:15,116 | INFO     | zombie collector waiting for pid 979530
[2025-10-13 18:10:12] 2025-10-13 16:09:15,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:10:12] 2025-10-13 16:09:15,116 | INFO     | collected zombie processes
[2025-10-13 18:10:12] 2025-10-13 16:09:15,116 | INFO     | will attempt to kill all subprocesses of pid=979530
[2025-10-13 18:10:12] 2025-10-13 16:09:15,191 | INFO     | process IDs to be killed: [979530] (in reverse order)
[2025-10-13 18:10:12] 2025-10-13 16:09:15,237 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:10:12] 2025-10-13 16:09:15,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:10:12] 2025-10-13 16:09:15,240 | INFO     | did not find any defunct processes belonging to 979530
[2025-10-13 18:10:12] 2025-10-13 16:09:15,242 | INFO     | did not find any defunct processes belonging to 979530
[2025-10-13 18:10:12] 2025-10-13 16:09:15,242 | INFO     | ready for new job
[2025-10-13 18:10:12] 2025-10-13 16:09:15,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:10:12] 2025-10-13 16:09:15,245 | INFO     | ***************************************
[2025-10-13 18:10:12] 2025-10-13 16:09:15,245 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:10:12] 2025-10-13 16:09:15,245 | INFO     | ***************************************
[2025-10-13 18:10:12] 2025-10-13 16:09:15,245 | INFO     | 
[2025-10-13 18:10:12] 2025-10-13 16:09:15,246 | INFO     | pilot is running in a VM
[2025-10-13 18:10:12] 2025-10-13 16:09:15,246 | INFO     | architecture information:
[2025-10-13 18:10:12] 2025-10-13 16:09:15,246 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:10:12] 2025-10-13 16:09:15,261 | INFO     | cat /etc/os-release:
[2025-10-13 18:10:12] NAME="CentOS Linux"
[2025-10-13 18:10:12] VERSION="7 (Core)"
[2025-10-13 18:10:12] ID="centos"
[2025-10-13 18:10:12] ID_LIKE="rhel fedora"
[2025-10-13 18:10:12] VERSION_ID="7"
[2025-10-13 18:10:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:10:12] ANSI_COLOR="0;31"
[2025-10-13 18:10:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:10:12] HOME_URL="https://www.centos.org/"
[2025-10-13 18:10:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:10:12] 
[2025-10-13 18:10:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:10:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:10:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:10:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:10:12] 
[2025-10-13 18:10:12] 2025-10-13 16:09:15,261 | INFO     | ***************************************
[2025-10-13 18:10:12] 2025-10-13 16:09:15,764 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 18:10:12] 2025-10-13 16:09:15,782 | INFO     | sufficient remaining disk space (254982225920 B)
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | INFO     | update_server=False
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:10:12] 2025-10-13 16:09:15,783 | INFO     | aborting loop
[2025-10-13 18:10:12] 2025-10-13 16:09:15,822 | INFO     | all job control threads have been joined
[2025-10-13 18:10:12] 2025-10-13 16:09:16,434 | INFO     | all data control threads have been joined
[2025-10-13 18:10:12] 2025-10-13 16:09:16,784 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:16,788 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:16,824 | INFO     | [job] control thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:16,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:10:12] 2025-10-13 16:09:16,927 | INFO     | all payload control threads have been joined
[2025-10-13 18:10:12] 2025-10-13 16:09:17,132 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,372 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,436 | INFO     | [data] control thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,655 | INFO     | [job] validate thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,888 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,890 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,932 | INFO     | [payload] control thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:17,995 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:18,291 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:18,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:10:12] 2025-10-13 16:09:18,895 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:19,653 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:19,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:10:12] 2025-10-13 16:09:46,535 | INFO     | PID=921299 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 18:10:12] 2025-10-13 16:09:46,535 | INFO     | .. there are 6 such processes running
[2025-10-13 18:10:12] 2025-10-13 16:09:46,536 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:10:12] 2025-10-13 16:09:46,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:10:12] 2025-10-13 16:09:46,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:10:12] 2025-10-13 16:10:06,010 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:10:12] 2025-10-13 16:10:07,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136901640988480)>', '<ExcThread(monitor, started 136900857812736)>']
[2025-10-13 18:10:12] 2025-10-13 16:10:07,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:10:12] 2025-10-13 16:10:07,639 | INFO     | [monitor] control thread has ended
[2025-10-13 18:10:12] 2025-10-13 16:10:12,041 | INFO     | all workflow threads have been joined
[2025-10-13 18:10:12] 2025-10-13 16:10:12,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:10:12] 2025-10-13 16:10:12,042 | INFO     | traces error code: 0
[2025-10-13 18:10:12] 2025-10-13 16:10:12,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:10:12] 2025-10-13 16:10:12,148 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:10:12] 2025-10-13 16:10:12,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:10:12] 2025-10-13 16:10:12,155 [wrapper] pilotpid: 921299
[2025-10-13 18:10:12] 2025-10-13 16:10:12,159 [wrapper] Pilot exit status: 0
[2025-10-13 18:10:12] 2025-10-13 16:10:12,171 [wrapper] pandaids: 6839822893
[2025-10-13 18:10:12] 2025-10-13 16:10:12,194 [wrapper] cleanup supervisor_pilot 1312054 921300
[2025-10-13 18:10:12] 2025-10-13 16:10:12,197 [wrapper] Test setup, not cleaning
[2025-10-13 18:10:12] 2025-10-13 16:10:12,200 [wrapper] apfmon messages muted
[2025-10-13 18:10:12] 2025-10-13 16:10:12,202 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:10:12] 2025-10-13 16:10:12,206 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:10:12]  *** Error codes and diagnostics ***
[2025-10-13 18:10:12]     "exeErrorCode": 0,
[2025-10-13 18:10:12]     "exeErrorDiag": "",
[2025-10-13 18:10:12]     "pilotErrorCode": 0,
[2025-10-13 18:10:12]     "pilotErrorDiag": "",
[2025-10-13 18:10:12]  *** Listing of results directory ***
[2025-10-13 18:10:12] total 413124
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:52 queuedata.json
[2025-10-13 18:10:12] -rwx------ 1 boinc boinc     36292 Oct 12 11:52 runpilot2-wrapper.sh
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:10:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:30 run_atlas
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:30 job.xml
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc 219602899 Oct 13 10:30 EVNT.46676267._003596.pool.root.1
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:30 start_atlas.sh
[2025-10-13 18:10:12] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:30 shared
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:30 input.tar.gz
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:30 boinc_setup_complete
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:30 boinc_lockfile
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:31 pandaJob.out
[2025-10-13 18:10:12] -rw------- 1 boinc boinc    972857 Oct 13 10:31 agis_schedconf.cvmfs.json
[2025-10-13 18:10:12] drwx------ 5 boinc boinc      4096 Oct 13 10:31 pilot3
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc      6405 Oct 13 10:39 init_data.xml
[2025-10-13 18:10:12] -rw------- 1 boinc boinc 190934861 Oct 13 18:08 HITS.46676269._075505.pool.root.1
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc       531 Oct 13 18:08 boinc_task_state.xml
[2025-10-13 18:10:12] -rw------- 1 boinc boinc        95 Oct 13 18:08 pilot_heartbeat.json
[2025-10-13 18:10:12] -rw------- 1 boinc boinc      1014 Oct 13 18:09 memory_monitor_summary.json
[2025-10-13 18:10:12] -rw------- 1 boinc boinc   1560580 Oct 13 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:10:12] -rw------- 1 boinc boinc    698421 Oct 13 18:09 log.46676269._075505.job.log.tgz.1
[2025-10-13 18:10:12] -rw------- 1 boinc boinc      7710 Oct 13 18:09 heartbeat.json
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc        28 Oct 13 18:10 wrapper_checkpoint.txt
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:10 boinc_mmap_file
[2025-10-13 18:10:12] -rw------- 1 boinc boinc      4885 Oct 13 18:10 pilotlog.txt
[2025-10-13 18:10:12] -rw------- 1 boinc boinc   3603855 Oct 13 18:10 log.46676269._075505.job.log.1
[2025-10-13 18:10:12] -rw------- 1 boinc boinc       357 Oct 13 18:10 output.list
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:10 runtime_log
[2025-10-13 18:10:12] -rw------- 1 boinc boinc   4321280 Oct 13 18:10 result.tar.gz
[2025-10-13 18:10:12] -rw------- 1 boinc boinc       641 Oct 13 18:10 yNmLDmFw7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0NjNDmRD6QIm.diag
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc      8639 Oct 13 18:10 runtime_log.err
[2025-10-13 18:10:12] -rw-r--r-- 1 boinc boinc     21002 Oct 13 18:10 stderr.txt
[2025-10-13 18:10:12] HITS file was successfully produced:
[2025-10-13 18:10:12] -rw------- 1 boinc boinc 190934861 Oct 13 18:08 shared/HITS.pool.root.1
[2025-10-13 18:10:12]  *** Contents of shared directory: ***
[2025-10-13 18:10:12] total 405720
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc 219602899 Oct 13 10:30 ATLAS.root_0
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:30 start_atlas.sh
[2025-10-13 18:10:12] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:30 input.tar.gz
[2025-10-13 18:10:12] -rw------- 1 boinc boinc 190934861 Oct 13 18:08 HITS.pool.root.1
[2025-10-13 18:10:12] -rw------- 1 boinc boinc   4321280 Oct 13 18:10 result.tar.gz
18:10:14 (888385): run_atlas exited; CPU time 27060.899180
18:10:14 (888385): called boinc_finish(0)

</stderr_txt>
]]>

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