Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:28 (26815): wrapper (7.7.26015): starting
04:22:28 (26815): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:22:28] Arguments: --nthreads 8
[2025-10-13 04:22:28] Threads: 8
[2025-10-13 04:22:28] Checking for CVMFS
[2025-10-13 04:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:22:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:22:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:22:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:22:28] 2.11.2.0 2800 224076 117772 151654 3 56 15236680 20275200 1 130560 1 79775615 99.974 14713413 12677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:22:28] CVMFS is ok
[2025-10-13 04:22:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:22:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:22:28] Further information can be found at the LHC@home message board.
[2025-10-13 04:22:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:22:28] Checking for apptainer binary...
[2025-10-13 04:22:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:22:28] Running /usr/bin/apptainer --version
[2025-10-13 04:22:28] apptainer version 1.3.2-1.el7
[2025-10-13 04:22:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:22:30] c-204-36.aglt2.org
[2025-10-13 04:22:30] apptainer works
[2025-10-13 04:22:30] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:22:30] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:22:30] Starting ATLAS job with PandaID=6839822920
[2025-10-13 04:22:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:42:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:42:05] 2025-10-13 10:41:12,072 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:42:05] 2025-10-13 10:41:12,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:42:05] 2025-10-13 10:41:12,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:42:05] 2025-10-13 10:41:12,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:42:05] 2025-10-13 10:41:12,076 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:42:05] 2025-10-13 10:41:12,077 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,077 | INFO     | sum of deviations: -17427807787.000004
[2025-10-13 06:42:05] 2025-10-13 10:41:12,078 | INFO     | mean x: 1760347914.5
[2025-10-13 06:42:05] 2025-10-13 10:41:12,078 | INFO     | mean y: 2548937.338235294
[2025-10-13 06:42:05] 2025-10-13 10:41:12,078 | INFO     | -- intersect: 39336683892.68583
[2025-10-13 06:42:05] 2025-10-13 10:41:12,078 | INFO     | intersect: 39336683892.68583
[2025-10-13 06:42:05] 2025-10-13 10:41:12,078 | INFO     | chi2: 2.5304526188988214
[2025-10-13 06:42:05] 2025-10-13 10:41:12,079 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,079 | INFO     | sum of deviations: -6617774587.999991
[2025-10-13 06:42:05] 2025-10-13 10:41:12,079 | INFO     | mean x: 1760347762.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | mean y: 2568300.7862595418
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | -- intersect: 16715146010.273596
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | intersect: 16715146010.273596
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | chi2: 1.6653020069028475
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | current chi2=1.6653020069028475 (change=34.189559825564416 %)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,080 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 06:42:05] 2025-10-13 10:41:12,081 | INFO     | sum of deviations: -5533026898.999992
[2025-10-13 06:42:05] 2025-10-13 10:41:12,081 | INFO     | mean x: 1760347609.5
[2025-10-13 06:42:05] 2025-10-13 10:41:12,081 | INFO     | mean y: 2570455.4603174604
[2025-10-13 06:42:05] 2025-10-13 10:41:12,081 | INFO     | -- intersect: 15706144743.214258
[2025-10-13 06:42:05] 2025-10-13 10:41:12,082 | INFO     | intersect: 15706144743.214258
[2025-10-13 06:42:05] 2025-10-13 10:41:12,082 | INFO     | chi2: 1.6666572746845032
[2025-10-13 06:42:05] 2025-10-13 10:41:12,082 | INFO     | current chi2=1.6666572746845032 (change=-0.0813827027192671 %)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,082 | INFO     | right removable region: 125
[2025-10-13 06:42:05] 2025-10-13 10:41:12,082 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,083 | INFO     | sum of deviations: -38273700188.00001
[2025-10-13 06:42:05] 2025-10-13 10:41:12,083 | INFO     | mean x: 1760348067.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,083 | INFO     | mean y: 2586656.13740458
[2025-10-13 06:42:05] 2025-10-13 10:41:12,083 | INFO     | -- intersect: 96659293671.87195
[2025-10-13 06:42:05] 2025-10-13 10:41:12,084 | INFO     | intersect: 96659293671.87195
[2025-10-13 06:42:05] 2025-10-13 10:41:12,084 | INFO     | chi2: 1.0597460170460138
[2025-10-13 06:42:05] 2025-10-13 10:41:12,084 | INFO     | current chi2=1.0597460170460138 (change=58.12029796048171 %)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,084 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 06:42:05] 2025-10-13 10:41:12,085 | INFO     | sum of deviations: -38515911180.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,085 | INFO     | mean x: 1760348219.5
[2025-10-13 06:42:05] 2025-10-13 10:41:12,085 | INFO     | mean y: 2587028.984126984
[2025-10-13 06:42:05] 2025-10-13 10:41:12,085 | INFO     | -- intersect: 109316655640.28111
[2025-10-13 06:42:05] 2025-10-13 10:41:12,085 | INFO     | intersect: 109316655640.28111
[2025-10-13 06:42:05] 2025-10-13 10:41:12,086 | INFO     | chi2: 1.0244519082181698
[2025-10-13 06:42:05] 2025-10-13 10:41:12,086 | INFO     | current chi2=1.0244519082181698 (change=3.330430901379981 %)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,086 | INFO     | left removable region: 20
[2025-10-13 06:42:05] 2025-10-13 10:41:12,086 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | sum of deviations: -20117978730.000004
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | mean x: 1760348189.0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | mean y: 2599525.4
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | -- intersect: 98670524487.48296
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | intersect: 98670524487.48296
[2025-10-13 06:42:05] 2025-10-13 10:41:12,087 | INFO     | chi2: 0.10442771052419977
[2025-10-13 06:42:05] 2025-10-13 10:41:12,088 | INFO     | -- intersect: 98670524487.48296
[2025-10-13 06:42:05] 2025-10-13 10:41:12,088 | INFO     | current memory leak: -56.05 B/s (using 105 data points, chi2=0.10)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,088 | INFO     | could have reported an average CPU frequency of 2005 MHz (8 samples)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,088 | INFO     | ..............................
[2025-10-13 06:42:05] 2025-10-13 10:41:12,088 | INFO     | . Timing measurements:
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . get job = 0 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . initial setup = 2 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . payload setup = 7 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . stage-in = 0 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . payload execution = 8267 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . stage-out = 0 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | . log creation = 0 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,089 | INFO     | ..............................
[2025-10-13 06:42:05] 2025-10-13 10:41:12,275 | INFO     | 
[2025-10-13 06:42:05] 2025-10-13 10:41:12,275 | INFO     | job summary report
[2025-10-13 06:42:05] 2025-10-13 10:41:12,275 | INFO     | --------------------------------------------------
[2025-10-13 06:42:05] 2025-10-13 10:41:12,276 | INFO     | PanDA job id: 6839822920
[2025-10-13 06:42:05] 2025-10-13 10:41:12,276 | INFO     | task id: 46676269
[2025-10-13 06:42:05] 2025-10-13 10:41:12,276 | INFO     | errors: (none)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:42:05] 2025-10-13 10:41:12,276 | INFO     | pilot state: finished 
[2025-10-13 06:42:05] 2025-10-13 10:41:12,277 | INFO     | transexitcode: 0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,277 | INFO     | exeerrorcode: 0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,277 | INFO     | exeerrordiag: 
[2025-10-13 06:42:05] 2025-10-13 10:41:12,277 | INFO     | exitcode: 0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,277 | INFO     | exitmsg: OK
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | cpuconsumptiontime: 58235 s
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | nevents: 400
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | neventsw: 0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | pid: 5677
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | pgrp: 5677
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | corecount: 8
[2025-10-13 06:42:05] 2025-10-13 10:41:12,278 | INFO     | event service: False
[2025-10-13 06:42:05] 2025-10-13 10:41:12,279 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 8279: 2377028, 8280: 2386026, 8282: 2386210, 8288: 2386404}
[2025-10-13 06:42:05] 2025-10-13 10:41:12,279 | INFO     | --------------------------------------------------
[2025-10-13 06:42:05] 2025-10-13 10:41:12,279 | INFO     | 
[2025-10-13 06:42:05] 2025-10-13 10:41:12,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:42:05] 2025-10-13 10:41:12,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:42:05] 2025-10-13 10:41:12,311 | INFO     | job 6839822920 has completed (purged errors)
[2025-10-13 06:42:05] 2025-10-13 10:41:12,312 | INFO     | overall cleanup function is called
[2025-10-13 06:42:05] 2025-10-13 10:41:13,320 | INFO     | --- collectZombieJob: --- 10, [5677]
[2025-10-13 06:42:05] 2025-10-13 10:41:13,321 | INFO     | zombie collector waiting for pid 5677
[2025-10-13 06:42:05] 2025-10-13 10:41:13,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:42:05] 2025-10-13 10:41:13,321 | INFO     | collected zombie processes
[2025-10-13 06:42:05] 2025-10-13 10:41:13,321 | INFO     | will attempt to kill all subprocesses of pid=5677
[2025-10-13 06:42:05] 2025-10-13 10:41:13,437 | INFO     | process IDs to be killed: [5677] (in reverse order)
[2025-10-13 06:42:05] 2025-10-13 10:41:13,492 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:42:05] 2025-10-13 10:41:13,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:42:05] 2025-10-13 10:41:13,499 | INFO     | did not find any defunct processes belonging to 5677
[2025-10-13 06:42:05] 2025-10-13 10:41:13,503 | INFO     | did not find any defunct processes belonging to 5677
[2025-10-13 06:42:05] 2025-10-13 10:41:13,503 | INFO     | ready for new job
[2025-10-13 06:42:05] 2025-10-13 10:41:13,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:42:05] 2025-10-13 10:41:13,506 | INFO     | ***************************************
[2025-10-13 06:42:05] 2025-10-13 10:41:13,506 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:42:05] 2025-10-13 10:41:13,507 | INFO     | ***************************************
[2025-10-13 06:42:05] 2025-10-13 10:41:13,507 | INFO     | 
[2025-10-13 06:42:05] 2025-10-13 10:41:13,507 | INFO     | architecture information:
[2025-10-13 06:42:05] 2025-10-13 10:41:13,508 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:42:05] 2025-10-13 10:41:13,527 | INFO     | cat /etc/os-release:
[2025-10-13 06:42:05] NAME="CentOS Linux"
[2025-10-13 06:42:05] VERSION="7 (Core)"
[2025-10-13 06:42:05] ID="centos"
[2025-10-13 06:42:05] ID_LIKE="rhel fedora"
[2025-10-13 06:42:05] VERSION_ID="7"
[2025-10-13 06:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:42:05] ANSI_COLOR="0;31"
[2025-10-13 06:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:42:05] HOME_URL="https://www.centos.org/"
[2025-10-13 06:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:42:05] 
[2025-10-13 06:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:42:05] 
[2025-10-13 06:42:05] 2025-10-13 10:41:13,527 | INFO     | ***************************************
[2025-10-13 06:42:05] 2025-10-13 10:41:14,030 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:42:05] 2025-10-13 10:41:14,052 | INFO     | sufficient remaining disk space (18558746624 B)
[2025-10-13 06:42:05] 2025-10-13 10:41:14,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:42:05] 2025-10-13 10:41:14,053 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:42:05] 2025-10-13 10:41:14,053 | INFO     | update_server=False
[2025-10-13 06:42:05] 2025-10-13 10:41:14,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:42:05] 2025-10-13 10:41:14,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:42:05] 2025-10-13 10:41:14,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:42:05] 2025-10-13 10:41:14,055 | INFO     | aborting loop
[2025-10-13 06:42:05] 2025-10-13 10:41:14,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:42:05] 2025-10-13 10:41:14,663 | INFO     | all payload control threads have been joined
[2025-10-13 06:42:05] 2025-10-13 10:41:14,671 | INFO     | all data control threads have been joined
[2025-10-13 06:42:05] 2025-10-13 10:41:15,055 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,059 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,060 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,140 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,322 | INFO     | all job control threads have been joined
[2025-10-13 06:42:05] 2025-10-13 10:41:15,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,461 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,528 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,668 | INFO     | [payload] control thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,676 | INFO     | [data] control thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:15,689 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,286 | INFO     | [job] validate thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,324 | INFO     | [job] control thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,329 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,448 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:16,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:42:05] 2025-10-13 10:41:20,737 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:42:05] 2025-10-13 10:41:44,884 | INFO     | PID=30480 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:42:05] 2025-10-13 10:41:44,885 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:42:05] 2025-10-13 10:41:44,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:42:05] 2025-10-13 10:41:44,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:42:05] 2025-10-13 10:42:00,163 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:42:05] 2025-10-13 10:42:00,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949571757888)>', '<ExcThread(monitor, started 139949110171392)>']
[2025-10-13 06:42:05] 2025-10-13 10:42:00,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:42:05] 2025-10-13 10:42:00,952 | INFO     | [monitor] control thread has ended
[2025-10-13 06:42:05] 2025-10-13 10:42:05,320 | INFO     | all workflow threads have been joined
[2025-10-13 06:42:05] 2025-10-13 10:42:05,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:42:05] 2025-10-13 10:42:05,325 | INFO     | traces error code: 0
[2025-10-13 06:42:05] 2025-10-13 10:42:05,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:42:05] 2025-10-13 10:42:05,446 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:42:05] 2025-10-13 10:42:05,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:42:05] 2025-10-13 10:42:05,456 [wrapper] pilotpid: 30480
[2025-10-13 06:42:05] 2025-10-13 10:42:05,460 [wrapper] Pilot exit status: 0
[2025-10-13 06:42:05] 2025-10-13 10:42:05,479 [wrapper] pandaids: 6839822920
[2025-10-13 06:42:05] 2025-10-13 10:42:05,528 [wrapper] cleanup supervisor_pilot 11263 30481
[2025-10-13 06:42:05] 2025-10-13 10:42:05,532 [wrapper] Test setup, not cleaning
[2025-10-13 06:42:05] 2025-10-13 10:42:05,537 [wrapper] apfmon messages muted
[2025-10-13 06:42:05] 2025-10-13 10:42:05,541 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:42:05] 2025-10-13 10:42:05,545 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:42:05]  *** Error codes and diagnostics ***
[2025-10-13 06:42:05]     "exeErrorCode": 0,
[2025-10-13 06:42:05]     "exeErrorDiag": "",
[2025-10-13 06:42:05]     "pilotErrorCode": 0,
[2025-10-13 06:42:05]     "pilotErrorDiag": "",
[2025-10-13 06:42:05]  *** Listing of results directory ***
[2025-10-13 06:42:05] total 411788
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-13 06:42:05] -rwx------ 1 boincer umatlas     36292 Oct 12 05:52 runpilot2-wrapper.sh
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:52 queuedata.json
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:42:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:22 run_atlas
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:22 job.xml
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas 220141471 Oct 13 04:22 EVNT.46676267._003597.pool.root.1
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 06:42:05] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:22 shared
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 04:22 input.tar.gz
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:22 boinc_lockfile
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:22 pandaJob.out
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas    972857 Oct 13 04:22 agis_schedconf.cvmfs.json
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas   1560580 Oct 13 04:22 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:42:05] drwx------ 5 boincer umatlas      4096 Oct 13 04:22 pilot3
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 06:39 init_data.xml
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas 194517693 Oct 13 06:40 HITS.46676269._075532.pool.root.1
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas       529 Oct 13 06:40 boinc_task_state.xml
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas      1051 Oct 13 06:40 memory_monitor_summary.json
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas    392967 Oct 13 06:41 log.46676269._075532.job.log.tgz.1
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas      7852 Oct 13 06:41 heartbeat.json
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas        95 Oct 13 06:41 pilot_heartbeat.json
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:42 wrapper_checkpoint.txt
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:42 boinc_mmap_file
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas      4746 Oct 13 06:42 pilotlog.txt
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas   1165294 Oct 13 06:42 log.46676269._075532.job.log.1
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas       357 Oct 13 06:42 output.list
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:42 runtime_log
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas   1576960 Oct 13 06:42 result.tar.gz
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 06:42 runtime_log.err
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas       661 Oct 13 06:42 GHxKDmbv7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiaTMDmwJAXCo.diag
[2025-10-13 06:42:05] -rw-r--r-- 1 boincer umatlas     20861 Oct 13 06:42 stderr.txt
[2025-10-13 06:42:05] HITS file was successfully produced:
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas 194517693 Oct 13 06:40 shared/HITS.pool.root.1
[2025-10-13 06:42:05]  *** Contents of shared directory: ***
[2025-10-13 06:42:05] total 407064
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas 220141471 Oct 13 04:22 ATLAS.root_0
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 06:42:05] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 04:22 input.tar.gz
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas 194517693 Oct 13 06:40 HITS.pool.root.1
[2025-10-13 06:42:05] -rw------- 1 boincer umatlas   1576960 Oct 13 06:42 result.tar.gz
06:42:06 (26815): run_atlas exited; CPU time 58065.162832
06:42:06 (26815): called boinc_finish(0)

</stderr_txt>
]]>

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