Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:28 (9483): wrapper (7.7.26015): starting
04:22:28 (9483): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:22:28] Arguments: --nthreads 8
[2025-10-13 04:22:28] Threads: 8
[2025-10-13 04:22:28] Checking for CVMFS
[2025-10-13 04:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:22:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:22:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:22:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:22:29] 2.11.2.0 10718 54104 121592 151654 1 188 13123468 18432000 1833 130560 0 49325927 99.975 2305944 37388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:22:29] CVMFS is ok
[2025-10-13 04:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:22:29] Further information can be found at the LHC@home message board.
[2025-10-13 04:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:22:29] Checking for apptainer binary...
[2025-10-13 04:22:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:22:29] Running /usr/bin/apptainer --version
[2025-10-13 04:22:29] apptainer version 1.3.2-1.el7
[2025-10-13 04:22:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:22:29] c-206-2.aglt2.org
[2025-10-13 04:22:29] apptainer works
[2025-10-13 04:22:29] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:22:29] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:22:29] Starting ATLAS job with PandaID=6839822844
[2025-10-13 04:22:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:33:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:33:05] 2025-10-13 11:32:09,024 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:33:05] 2025-10-13 11:32:09,025 | INFO     | sum of square deviations: 1995283922.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,026 | INFO     | sum of deviations: 20445189074.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,027 | INFO     | mean x: 1760349427.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,027 | INFO     | mean y: 2477467.365591398
[2025-10-13 07:33:05] 2025-10-13 11:32:09,027 | INFO     | -- intersect: -18035394975.595043
[2025-10-13 07:33:05] 2025-10-13 11:32:09,027 | INFO     | intersect: -18035394975.595043
[2025-10-13 07:33:05] 2025-10-13 11:32:09,028 | INFO     | chi2: 1.5127663215921485
[2025-10-13 07:33:05] 2025-10-13 11:32:09,028 | INFO     | sum of square deviations: 1838657730.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,030 | INFO     | sum of deviations: 19838034235.999992
[2025-10-13 07:33:05] 2025-10-13 11:32:09,030 | INFO     | mean x: 1760349275.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,030 | INFO     | mean y: 2476875.9337016577
[2025-10-13 07:33:05] 2025-10-13 11:32:09,030 | INFO     | -- intersect: -18990655241.574524
[2025-10-13 07:33:05] 2025-10-13 11:32:09,030 | INFO     | intersect: -18990655241.574524
[2025-10-13 07:33:05] 2025-10-13 11:32:09,031 | INFO     | chi2: 1.513905489009173
[2025-10-13 07:33:05] 2025-10-13 11:32:09,031 | INFO     | current chi2=1.513905489009173 (change=-0.07530359453173983 %)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,031 | INFO     | right removable region: 180
[2025-10-13 07:33:05] 2025-10-13 11:32:09,032 | INFO     | sum of square deviations: 1838657730.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,033 | INFO     | sum of deviations: -9553286555.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,033 | INFO     | mean x: 1760349580.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,034 | INFO     | mean y: 2506369.900552486
[2025-10-13 07:33:05] 2025-10-13 11:32:09,034 | INFO     | -- intersect: 9148919919.481583
[2025-10-13 07:33:05] 2025-10-13 11:32:09,034 | INFO     | intersect: 9148919919.481583
[2025-10-13 07:33:05] 2025-10-13 11:32:09,034 | INFO     | chi2: 0.036551950096977676
[2025-10-13 07:33:05] 2025-10-13 11:32:09,034 | INFO     | current chi2=0.036551950096977676 (change=97.58376759349667 %)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,035 | INFO     | sum of square deviations: 1690450300.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,036 | INFO     | sum of deviations: -11588434343.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,037 | INFO     | mean x: 1760349732.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,037 | INFO     | mean y: 2508424.710227273
[2025-10-13 07:33:05] 2025-10-13 11:32:09,037 | INFO     | -- intersect: 12070119815.991024
[2025-10-13 07:33:05] 2025-10-13 11:32:09,037 | INFO     | intersect: 12070119815.991024
[2025-10-13 07:33:05] 2025-10-13 11:32:09,037 | INFO     | chi2: 0.017526217244131767
[2025-10-13 07:33:05] 2025-10-13 11:32:09,038 | INFO     | current chi2=0.017526217244131767 (change=52.051211501350416 %)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,038 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,040 | INFO     | sum of deviations: -10935256011.999998
[2025-10-13 07:33:05] 2025-10-13 11:32:09,040 | INFO     | mean x: 1760349885.0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,040 | INFO     | mean y: 2507709.9064327483
[2025-10-13 07:33:05] 2025-10-13 11:32:09,040 | INFO     | -- intersect: 12418346032.11343
[2025-10-13 07:33:05] 2025-10-13 11:32:09,040 | INFO     | intersect: 12418346032.11343
[2025-10-13 07:33:05] 2025-10-13 11:32:09,041 | INFO     | chi2: 0.01736494523462524
[2025-10-13 07:33:05] 2025-10-13 11:32:09,041 | INFO     | current chi2=0.01736494523462524 (change=0.920175798691107 %)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,041 | INFO     | left removable region: 30
[2025-10-13 07:33:05] 2025-10-13 11:32:09,041 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,042 | INFO     | sum of deviations: -6678102520.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,043 | INFO     | mean x: 1760350159.5
[2025-10-13 07:33:05] 2025-10-13 11:32:09,043 | INFO     | mean y: 2502716.953333333
[2025-10-13 07:33:05] 2025-10-13 11:32:09,043 | INFO     | -- intersect: 11236110256.42261
[2025-10-13 07:33:05] 2025-10-13 11:32:09,043 | INFO     | intersect: 11236110256.42261
[2025-10-13 07:33:05] 2025-10-13 11:32:09,043 | INFO     | chi2: 0.015335880324740097
[2025-10-13 07:33:05] 2025-10-13 11:32:09,044 | INFO     | -- intersect: 11236110256.42261
[2025-10-13 07:33:05] 2025-10-13 11:32:09,044 | INFO     | current memory leak: -6.38 B/s (using 150 data points, chi2=0.02)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,044 | INFO     | could have reported an average CPU frequency of 2529 MHz (10 samples)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | ..............................
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | . Timing measurements:
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | . get job = 0 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | . initial setup = 2 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | . payload setup = 4 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,045 | INFO     | . stage-in = 0 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,046 | INFO     | . payload execution = 11338 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,046 | INFO     | . stage-out = 2 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,046 | INFO     | . log creation = 0 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,046 | INFO     | ..............................
[2025-10-13 07:33:05] 2025-10-13 11:32:09,202 | INFO     | 
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | job summary report
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | --------------------------------------------------
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | PanDA job id: 6839822844
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | task id: 46676269
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | errors: (none)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:33:05] 2025-10-13 11:32:09,204 | INFO     | pilot state: finished 
[2025-10-13 07:33:05] 2025-10-13 11:32:09,204 | INFO     | transexitcode: 0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,204 | INFO     | exeerrorcode: 0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,204 | INFO     | exeerrordiag: 
[2025-10-13 07:33:05] 2025-10-13 11:32:09,204 | INFO     | exitcode: 0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | exitmsg: OK
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | cpuconsumptiontime: 85110 s
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | nevents: 400
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | neventsw: 0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | pid: 19661
[2025-10-13 07:33:05] 2025-10-13 11:32:09,205 | INFO     | pgrp: 19661
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | corecount: 8
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | event service: False
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | sizes: {0: 2348856, 1: 2348856, 4: 2349146, 11: 2349174, 11347: 2378503, 11349: 2387685, 11354: 2387823}
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | --------------------------------------------------
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | 
[2025-10-13 07:33:05] 2025-10-13 11:32:09,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:33:05] 2025-10-13 11:32:09,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:33:05] 2025-10-13 11:32:09,230 | INFO     | job 6839822844 has completed (purged errors)
[2025-10-13 07:33:05] 2025-10-13 11:32:09,231 | INFO     | overall cleanup function is called
[2025-10-13 07:33:05] 2025-10-13 11:32:10,239 | INFO     | --- collectZombieJob: --- 10, [19661]
[2025-10-13 07:33:05] 2025-10-13 11:32:10,239 | INFO     | zombie collector waiting for pid 19661
[2025-10-13 07:33:05] 2025-10-13 11:32:10,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:33:05] 2025-10-13 11:32:10,239 | INFO     | collected zombie processes
[2025-10-13 07:33:05] 2025-10-13 11:32:10,240 | INFO     | will attempt to kill all subprocesses of pid=19661
[2025-10-13 07:33:05] 2025-10-13 11:32:10,389 | INFO     | process IDs to be killed: [19661] (in reverse order)
[2025-10-13 07:33:05] 2025-10-13 11:32:10,434 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:33:05] 2025-10-13 11:32:10,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:33:05] 2025-10-13 11:32:10,439 | INFO     | did not find any defunct processes belonging to 19661
[2025-10-13 07:33:05] 2025-10-13 11:32:10,444 | INFO     | did not find any defunct processes belonging to 19661
[2025-10-13 07:33:05] 2025-10-13 11:32:10,444 | INFO     | ready for new job
[2025-10-13 07:33:05] 2025-10-13 11:32:10,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:33:05] 2025-10-13 11:32:10,447 | INFO     | ***************************************
[2025-10-13 07:33:05] 2025-10-13 11:32:10,447 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:33:05] 2025-10-13 11:32:10,447 | INFO     | ***************************************
[2025-10-13 07:33:05] 2025-10-13 11:32:10,447 | INFO     | 
[2025-10-13 07:33:05] 2025-10-13 11:32:10,448 | INFO     | architecture information:
[2025-10-13 07:33:05] 2025-10-13 11:32:10,449 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:33:05] 2025-10-13 11:32:10,460 | INFO     | cat /etc/os-release:
[2025-10-13 07:33:05] NAME="CentOS Linux"
[2025-10-13 07:33:05] VERSION="7 (Core)"
[2025-10-13 07:33:05] ID="centos"
[2025-10-13 07:33:05] ID_LIKE="rhel fedora"
[2025-10-13 07:33:05] VERSION_ID="7"
[2025-10-13 07:33:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:33:05] ANSI_COLOR="0;31"
[2025-10-13 07:33:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:33:05] HOME_URL="https://www.centos.org/"
[2025-10-13 07:33:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:33:05] 
[2025-10-13 07:33:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:33:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:33:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:33:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:33:05] 
[2025-10-13 07:33:05] 2025-10-13 11:32:10,460 | INFO     | ***************************************
[2025-10-13 07:33:05] 2025-10-13 11:32:10,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:33:05] 2025-10-13 11:32:10,983 | INFO     | sufficient remaining disk space (28276948992 B)
[2025-10-13 07:33:05] 2025-10-13 11:32:10,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:33:05] 2025-10-13 11:32:10,984 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:33:05] 2025-10-13 11:32:10,984 | INFO     | update_server=False
[2025-10-13 07:33:05] 2025-10-13 11:32:10,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:33:05] 2025-10-13 11:32:10,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:33:05] 2025-10-13 11:32:10,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:33:05] 2025-10-13 11:32:11,010 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:33:05] 2025-10-13 11:32:11,011 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:33:05] 2025-10-13 11:32:11,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:33:05] 2025-10-13 11:32:11,011 | INFO     | will abort loop
[2025-10-13 07:33:05] 2025-10-13 11:32:11,261 | INFO     | all data control threads have been joined
[2025-10-13 07:33:05] 2025-10-13 11:32:11,329 | INFO     | all job control threads have been joined
[2025-10-13 07:33:05] 2025-10-13 11:32:11,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:33:05] 2025-10-13 11:32:11,991 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:11,991 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,017 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,123 | INFO     | all payload control threads have been joined
[2025-10-13 07:33:05] 2025-10-13 11:32:12,264 | INFO     | [data] control thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,289 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,335 | INFO     | [job] control thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,383 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,618 | INFO     | [job] validate thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:12,622 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:13,128 | INFO     | [payload] control thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:13,177 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:13,188 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:13,364 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:13,973 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:14,993 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:21,068 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:33:05] 2025-10-13 11:32:22,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:33:05] 2025-10-13 11:32:40,455 | INFO     | PID=13187 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:33:05] 2025-10-13 11:32:40,456 | INFO     | .. there are 3 such processes running
[2025-10-13 07:33:05] 2025-10-13 11:32:40,457 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:33:05] 2025-10-13 11:32:40,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:33:05] 2025-10-13 11:32:40,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:33:05] 2025-10-13 11:32:58,712 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:33:05] 2025-10-13 11:32:59,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821276436288)>', '<ExcThread(monitor, started 139820680591104)>']
[2025-10-13 07:33:05] 2025-10-13 11:33:00,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:33:05] 2025-10-13 11:33:00,553 | INFO     | [monitor] control thread has ended
[2025-10-13 07:33:05] 2025-10-13 11:33:04,846 | INFO     | all workflow threads have been joined
[2025-10-13 07:33:05] 2025-10-13 11:33:04,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:33:05] 2025-10-13 11:33:04,847 | INFO     | traces error code: 0
[2025-10-13 07:33:05] 2025-10-13 11:33:04,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:33:05] 2025-10-13 11:33:04,936 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:33:05] 2025-10-13 11:33:04,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:33:05] 2025-10-13 11:33:04,941 [wrapper] pilotpid: 13187
[2025-10-13 07:33:05] 2025-10-13 11:33:04,947 [wrapper] Pilot exit status: 0
[2025-10-13 07:33:05] 2025-10-13 11:33:04,958 [wrapper] pandaids: 6839822844
[2025-10-13 07:33:05] 2025-10-13 11:33:04,998 [wrapper] cleanup supervisor_pilot 21592 13188
[2025-10-13 07:33:05] 2025-10-13 11:33:05,000 [wrapper] Test setup, not cleaning
[2025-10-13 07:33:05] 2025-10-13 11:33:05,003 [wrapper] apfmon messages muted
[2025-10-13 07:33:05] 2025-10-13 11:33:05,006 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:33:05] 2025-10-13 11:33:05,008 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:33:05]  *** Error codes and diagnostics ***
[2025-10-13 07:33:05]     "exeErrorCode": 0,
[2025-10-13 07:33:05]     "exeErrorDiag": "",
[2025-10-13 07:33:05]     "pilotErrorCode": 0,
[2025-10-13 07:33:05]     "pilotErrorDiag": "",
[2025-10-13 07:33:05]  *** Listing of results directory ***
[2025-10-13 07:33:05] total 420252
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:37 pilot3.tar.gz
[2025-10-13 07:33:05] -rwx------ 1 boincer umatlas     36292 Oct 12 05:39 runpilot2-wrapper.sh
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:39 queuedata.json
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:33:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:22 run_atlas
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:22 job.xml
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas 222892945 Oct 13 04:22 EVNT.46676267._003592.pool.root.1
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 07:33:05] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:22 shared
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 04:22 input.tar.gz
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:22 boinc_lockfile
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 04:22 pandaJob.out
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas    972857 Oct 13 04:22 agis_schedconf.cvmfs.json
[2025-10-13 07:33:05] drwx------ 5 boincer umatlas      4096 Oct 13 04:22 pilot3
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 07:27 init_data.xml
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas 199480910 Oct 13 07:31 HITS.46676269._075456.pool.root.1
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas       531 Oct 13 07:31 boinc_task_state.xml
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas      1054 Oct 13 07:31 memory_monitor_summary.json
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas   1560580 Oct 13 07:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas    435512 Oct 13 07:32 log.46676269._075456.job.log.tgz.1
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas      7858 Oct 13 07:32 heartbeat.json
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas        95 Oct 13 07:32 pilot_heartbeat.json
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:32 boinc_mmap_file
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas        28 Oct 13 07:33 wrapper_checkpoint.txt
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas      5079 Oct 13 07:33 pilotlog.txt
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas   1594932 Oct 13 07:33 log.46676269._075456.job.log.1
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas       357 Oct 13 07:33 output.list
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:33 runtime_log
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas   2048000 Oct 13 07:33 result.tar.gz
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas       660 Oct 13 07:33 Z8uLDmhj7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9MjNDmIl619n.diag
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 07:33 runtime_log.err
[2025-10-13 07:33:05] -rw-r--r-- 1 boincer umatlas     20883 Oct 13 07:33 stderr.txt
[2025-10-13 07:33:05] HITS file was successfully produced:
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas 199480910 Oct 13 07:31 shared/HITS.pool.root.1
[2025-10-13 07:33:05]  *** Contents of shared directory: ***
[2025-10-13 07:33:05] total 415064
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas 222892945 Oct 13 04:22 ATLAS.root_0
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 07:33:05] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 04:22 input.tar.gz
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas 199480910 Oct 13 07:31 HITS.pool.root.1
[2025-10-13 07:33:05] -rw------- 1 boincer umatlas   2048000 Oct 13 07:33 result.tar.gz
07:33:06 (9483): run_atlas exited; CPU time 85209.688014
07:33:06 (9483): called boinc_finish(0)

</stderr_txt>
]]>

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