Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:31:02 (888728): wrapper (7.7.26015): starting
10:31:02 (888728): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 10:31:02] Arguments: --nthreads 12
[2025-10-13 10:31:02] Threads: 12
[2025-10-13 10:31:02] Checking for CVMFS
[2025-10-13 10:31:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:31:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:31:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:31:04] 2.13.2.0 888219 0 25376 151654 3 1 2025937 4096001 0 130560 0 0 0.000 1291 1857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:31:04] CVMFS is ok
[2025-10-13 10:31:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:31:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:31:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:31:04] Further information can be found at the LHC@home message board.
[2025-10-13 10:31:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:31:04] Checking for apptainer binary...
[2025-10-13 10:31:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:31:04] Running /usr/bin/apptainer --version
[2025-10-13 10:31:04] apptainer version 1.4.3
[2025-10-13 10:31:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:31:04] 9628
[2025-10-13 10:31:04] apptainer works
[2025-10-13 10:31:04] Set ATHENA_PROC_NUMBER=12
[2025-10-13 10:31:04] Set ATHENA_CORE_NUMBER=12
[2025-10-13 10:31:04] Starting ATLAS job with PandaID=6839660533
[2025-10-13 10:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:09:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:09:11] 2025-10-13 16:08:16,713 | INFO     | sum of square deviations: 28068147089.2473
[2025-10-13 18:09:11] 2025-10-13 16:08:16,716 | INFO     | sum of deviations: 126973923767.3631
[2025-10-13 18:09:11] 2025-10-13 16:08:16,716 | INFO     | mean x: 1760357977.8685968
[2025-10-13 18:09:11] 2025-10-13 16:08:16,716 | INFO     | mean y: 2634671.7349665924
[2025-10-13 18:09:11] 2025-10-13 16:08:16,723 | INFO     | -- intersect: -7960825081.216997
[2025-10-13 18:09:11] 2025-10-13 16:08:16,723 | INFO     | intersect: -7960825081.216997
[2025-10-13 18:09:11] 2025-10-13 16:08:16,724 | INFO     | chi2: 2.468337948936981
[2025-10-13 18:09:11] 2025-10-13 16:08:16,724 | INFO     | sum of square deviations: 27140974230.43231
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | sum of deviations: 157004057957.99997
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | mean x: 1760357825.3783784
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | mean y: 2639563.4166666665
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | -- intersect: -10180610296.959602
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | intersect: -10180610296.959602
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | chi2: 1.6868497980149102
[2025-10-13 18:09:11] 2025-10-13 16:08:16,727 | INFO     | current chi2=1.6868497980149102 (change=31.660500591445672 %)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,734 | INFO     | sum of square deviations: 26234452921.530804
[2025-10-13 18:09:11] 2025-10-13 16:08:16,737 | INFO     | sum of deviations: 154726531764.06387
[2025-10-13 18:09:11] 2025-10-13 16:08:16,737 | INFO     | mean x: 1760357672.8883827
[2025-10-13 18:09:11] 2025-10-13 16:08:16,737 | INFO     | mean y: 2639180.287015945
[2025-10-13 18:09:11] 2025-10-13 16:08:16,737 | INFO     | -- intersect: -10379663748.040434
[2025-10-13 18:09:11] 2025-10-13 16:08:16,737 | INFO     | intersect: -10379663748.040434
[2025-10-13 18:09:11] 2025-10-13 16:08:16,738 | INFO     | chi2: 1.6865895651754417
[2025-10-13 18:09:11] 2025-10-13 16:08:16,738 | INFO     | current chi2=1.6865895651754417 (change=0.015427149457809722 %)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,738 | INFO     | right removable region: 438
[2025-10-13 18:09:11] 2025-10-13 16:08:16,738 | INFO     | sum of square deviations: 27140736330.43232
[2025-10-13 18:09:11] 2025-10-13 16:08:16,751 | INFO     | sum of deviations: 44689635340.45943
[2025-10-13 18:09:11] 2025-10-13 16:08:16,751 | INFO     | mean x: 1760358130.3783784
[2025-10-13 18:09:11] 2025-10-13 16:08:16,751 | INFO     | mean y: 2648148.527027027
[2025-10-13 18:09:11] 2025-10-13 16:08:16,751 | INFO     | -- intersect: -2895938019.4175754
[2025-10-13 18:09:11] 2025-10-13 16:08:16,752 | INFO     | intersect: -2895938019.4175754
[2025-10-13 18:09:11] 2025-10-13 16:08:16,752 | INFO     | chi2: 0.9280728997669052
[2025-10-13 18:09:11] 2025-10-13 16:08:16,752 | INFO     | current chi2=0.9280728997669052 (change=62.40089813606801 %)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,752 | INFO     | sum of square deviations: 26234031291.07517
[2025-10-13 18:09:11] 2025-10-13 16:08:16,757 | INFO     | sum of deviations: 15699256356.753994
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | mean x: 1760358282.883827
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | mean y: 2653018.28929385
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | -- intersect: -1050799867.243032
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | intersect: -1050799867.243032
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | chi2: 0.7971099081982121
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | current chi2=0.7971099081982121 (change=14.111282809958759 %)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | left removable region: 20
[2025-10-13 18:09:11] 2025-10-13 16:08:16,758 | INFO     | sum of square deviations: 22646641686.672207
[2025-10-13 18:09:11] 2025-10-13 16:08:16,770 | INFO     | sum of deviations: 37010951894.65792
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | mean x: 1760358252.4043062
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | mean y: 2659502.0789473685
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | -- intersect: -2874258651.9907937
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | intersect: -2874258651.9907937
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | chi2: 0.0037718797827728688
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | -- intersect: -2874258651.9907937
[2025-10-13 18:09:11] 2025-10-13 16:08:16,771 | INFO     | current memory leak: 1.63 B/s (using 418 data points, chi2=0.00)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | could have reported an average CPU frequency of 2396 MHz (18 samples)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | ..............................
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . Timing measurements:
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . get job = 0 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . initial setup = 1 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . payload setup = 6 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . stage-in = 0 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . payload execution = 27377 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . stage-out = 2 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | . log creation = 0 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,772 | INFO     | ..............................
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | 
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | job summary report
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | --------------------------------------------------
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | PanDA job id: 6839660533
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | task id: 46676269
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | errors: (none)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | pilot state: finished 
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | transexitcode: 0
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | exeerrorcode: 0
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | exeerrordiag: 
[2025-10-13 18:09:11] 2025-10-13 16:08:16,920 | INFO     | exitcode: 0
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | exitmsg: OK
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | cpuconsumptiontime: 26176 s
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | nevents: 400
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | neventsw: 0
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | pid: 979535
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | pgrp: 979535
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | corecount: 12
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | event service: False
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 27387: 2386377, 27390: 2395375, 27391: 2395431, 27402: 2395753}
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | --------------------------------------------------
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | 
[2025-10-13 18:09:11] 2025-10-13 16:08:16,921 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | job 6839660533 has completed (purged errors)
[2025-10-13 18:09:11] 2025-10-13 16:08:16,952 | INFO     | overall cleanup function is called
[2025-10-13 18:09:11] 2025-10-13 16:08:17,967 | INFO     | --- collectZombieJob: --- 10, [979535]
[2025-10-13 18:09:11] 2025-10-13 16:08:17,967 | INFO     | zombie collector waiting for pid 979535
[2025-10-13 18:09:11] 2025-10-13 16:08:17,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:09:11] 2025-10-13 16:08:17,968 | INFO     | collected zombie processes
[2025-10-13 18:09:11] 2025-10-13 16:08:17,968 | INFO     | will attempt to kill all subprocesses of pid=979535
[2025-10-13 18:09:11] 2025-10-13 16:08:18,195 | INFO     | process IDs to be killed: [979535] (in reverse order)
[2025-10-13 18:09:11] 2025-10-13 16:08:18,307 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:09:11] 2025-10-13 16:08:18,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:09:11] 2025-10-13 16:08:18,315 | INFO     | did not find any defunct processes belonging to 979535
[2025-10-13 18:09:11] 2025-10-13 16:08:18,325 | INFO     | did not find any defunct processes belonging to 979535
[2025-10-13 18:09:11] 2025-10-13 16:08:18,325 | INFO     | ready for new job
[2025-10-13 18:09:11] 2025-10-13 16:08:18,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:09:11] 2025-10-13 16:08:18,337 | INFO     | ***************************************
[2025-10-13 18:09:11] 2025-10-13 16:08:18,337 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 18:09:11] 2025-10-13 16:08:18,337 | INFO     | ***************************************
[2025-10-13 18:09:11] 2025-10-13 16:08:18,337 | INFO     | 
[2025-10-13 18:09:11] 2025-10-13 16:08:18,338 | INFO     | pilot is running in a VM
[2025-10-13 18:09:11] 2025-10-13 16:08:18,338 | INFO     | architecture information:
[2025-10-13 18:09:11] 2025-10-13 16:08:18,341 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:09:11] 2025-10-13 16:08:18,385 | INFO     | cat /etc/os-release:
[2025-10-13 18:09:11] NAME="CentOS Linux"
[2025-10-13 18:09:11] VERSION="7 (Core)"
[2025-10-13 18:09:11] ID="centos"
[2025-10-13 18:09:11] ID_LIKE="rhel fedora"
[2025-10-13 18:09:11] VERSION_ID="7"
[2025-10-13 18:09:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:09:11] ANSI_COLOR="0;31"
[2025-10-13 18:09:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:09:11] HOME_URL="https://www.centos.org/"
[2025-10-13 18:09:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:09:11] 
[2025-10-13 18:09:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:09:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:09:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:09:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:09:11] 
[2025-10-13 18:09:11] 2025-10-13 16:08:18,385 | INFO     | ***************************************
[2025-10-13 18:09:11] 2025-10-13 16:08:18,887 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 18:09:11] 2025-10-13 16:08:18,931 | INFO     | sufficient remaining disk space (254750490624 B)
[2025-10-13 18:09:11] 2025-10-13 16:08:18,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:09:11] 2025-10-13 16:08:18,932 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:09:11] 2025-10-13 16:08:18,932 | INFO     | update_server=False
[2025-10-13 18:09:11] 2025-10-13 16:08:18,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:09:11] 2025-10-13 16:08:18,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:09:11] 2025-10-13 16:08:18,937 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:09:11] 2025-10-13 16:08:18,937 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:09:11] 2025-10-13 16:08:18,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:09:11] 2025-10-13 16:08:18,938 | INFO     | will abort loop
[2025-10-13 18:09:11] 2025-10-13 16:08:19,346 | INFO     | all job control threads have been joined
[2025-10-13 18:09:11] 2025-10-13 16:08:19,848 | INFO     | all data control threads have been joined
[2025-10-13 18:09:11] 2025-10-13 16:08:19,941 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:19,942 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:19,944 | INFO     | [job] validate thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:19,954 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,016 | INFO     | all payload control threads have been joined
[2025-10-13 18:09:11] 2025-10-13 16:08:20,353 | INFO     | [job] control thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,570 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,591 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:09:11] 2025-10-13 16:08:20,853 | INFO     | [data] control thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,938 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,948 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:20,963 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:21,021 | INFO     | [payload] control thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:21,184 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:21,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:09:11] 2025-10-13 16:08:22,947 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:24,645 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:29,527 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:09:11] 2025-10-13 16:08:30,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:09:11] 2025-10-13 16:08:49,143 | INFO     | PID=921196 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 18:09:11] 2025-10-13 16:08:49,143 | INFO     | .. there are 7 such processes running
[2025-10-13 18:09:11] 2025-10-13 16:08:49,144 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:09:11] 2025-10-13 16:08:49,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:09:11] 2025-10-13 16:08:49,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:09:11] 2025-10-13 16:09:05,866 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:09:11] 2025-10-13 16:09:06,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125566457206592)>', '<ExcThread(monitor, started 125565809960704)>']
[2025-10-13 18:09:11] 2025-10-13 16:09:07,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:09:11] 2025-10-13 16:09:07,238 | INFO     | [monitor] control thread has ended
[2025-10-13 18:09:11] 2025-10-13 16:09:11,327 | INFO     | all workflow threads have been joined
[2025-10-13 18:09:11] 2025-10-13 16:09:11,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:09:11] 2025-10-13 16:09:11,328 | INFO     | traces error code: 0
[2025-10-13 18:09:11] 2025-10-13 16:09:11,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:09:11] 2025-10-13 16:09:11,452 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:09:11] 2025-10-13 16:09:11,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:09:11] 2025-10-13 16:09:11,458 [wrapper] pilotpid: 921196
[2025-10-13 18:09:11] 2025-10-13 16:09:11,461 [wrapper] Pilot exit status: 0
[2025-10-13 18:09:11] 2025-10-13 16:09:11,473 [wrapper] pandaids: 6839660533
[2025-10-13 18:09:11] 2025-10-13 16:09:11,502 [wrapper] cleanup supervisor_pilot 1312066 921197
[2025-10-13 18:09:11] 2025-10-13 16:09:11,505 [wrapper] Test setup, not cleaning
[2025-10-13 18:09:11] 2025-10-13 16:09:11,509 [wrapper] apfmon messages muted
[2025-10-13 18:09:11] 2025-10-13 16:09:11,512 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:09:11] 2025-10-13 16:09:11,516 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:09:11]  *** Error codes and diagnostics ***
[2025-10-13 18:09:11]     "exeErrorCode": 0,
[2025-10-13 18:09:11]     "exeErrorDiag": "",
[2025-10-13 18:09:11]     "pilotErrorCode": 0,
[2025-10-13 18:09:11]     "pilotErrorDiag": "",
[2025-10-13 18:09:11]  *** Listing of results directory ***
[2025-10-13 18:09:11] total 408272
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:55 queuedata.json
[2025-10-13 18:09:11] -rwx------ 1 boinc boinc     36292 Oct 12 09:56 runpilot2-wrapper.sh
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:09:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:31 run_atlas
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:31 job.xml
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc 221961513 Oct 13 10:31 EVNT.46676267._003523.pool.root.1
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:31 start_atlas.sh
[2025-10-13 18:09:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:31 shared
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc    576707 Oct 13 10:31 input.tar.gz
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:31 boinc_setup_complete
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:31 boinc_lockfile
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:31 pandaJob.out
[2025-10-13 18:09:11] -rw------- 1 boinc boinc    972857 Oct 13 10:31 agis_schedconf.cvmfs.json
[2025-10-13 18:09:11] drwx------ 4 boinc boinc      4096 Oct 13 10:31 pilot3
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc      6405 Oct 13 10:39 init_data.xml
[2025-10-13 18:09:11] -rw------- 1 boinc boinc 183653388 Oct 13 18:06 HITS.46676269._074024.pool.root.1
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc       531 Oct 13 18:07 boinc_task_state.xml
[2025-10-13 18:09:11] -rw------- 1 boinc boinc      1014 Oct 13 18:07 memory_monitor_summary.json
[2025-10-13 18:09:11] -rw------- 1 boinc boinc   1560580 Oct 13 18:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:09:11] -rw------- 1 boinc boinc    685077 Oct 13 18:08 log.46676269._074024.job.log.tgz.1
[2025-10-13 18:09:11] -rw------- 1 boinc boinc      7710 Oct 13 18:08 heartbeat.json
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:08 boinc_mmap_file
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc        28 Oct 13 18:08 wrapper_checkpoint.txt
[2025-10-13 18:09:11] -rw------- 1 boinc boinc        95 Oct 13 18:08 pilot_heartbeat.json
[2025-10-13 18:09:11] -rw------- 1 boinc boinc      5143 Oct 13 18:09 pilotlog.txt
[2025-10-13 18:09:11] -rw------- 1 boinc boinc   3584703 Oct 13 18:09 log.46676269._074024.job.log.1
[2025-10-13 18:09:11] -rw------- 1 boinc boinc       357 Oct 13 18:09 output.list
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:09 runtime_log
[2025-10-13 18:09:11] -rw------- 1 boinc boinc   4290560 Oct 13 18:09 result.tar.gz
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc      8639 Oct 13 18:09 runtime_log.err
[2025-10-13 18:09:11] -rw------- 1 boinc boinc       641 Oct 13 18:09 77sKDmI75R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU6iNDmDpgFJm.diag
[2025-10-13 18:09:11] -rw-r--r-- 1 boinc boinc     21022 Oct 13 18:09 stderr.txt
[2025-10-13 18:09:11] HITS file was successfully produced:
[2025-10-13 18:09:11] -rw------- 1 boinc boinc 183653388 Oct 13 18:06 shared/HITS.pool.root.1
[2025-10-13 18:09:11]  *** Contents of shared directory: ***
[2025-10-13 18:09:11] total 400892
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc 221961513 Oct 13 10:31 ATLAS.root_0
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:31 start_atlas.sh
[2025-10-13 18:09:11] -rw-r--r-- 2 boinc boinc    576707 Oct 13 10:31 input.tar.gz
[2025-10-13 18:09:11] -rw------- 1 boinc boinc 183653388 Oct 13 18:06 HITS.pool.root.1
[2025-10-13 18:09:11] -rw------- 1 boinc boinc   4290560 Oct 13 18:09 result.tar.gz
18:09:12 (888728): run_atlas exited; CPU time 26328.392069
18:09:12 (888728): called boinc_finish(0)

</stderr_txt>
]]>

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