Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-15 04:07:13 (11144): vboxwrapper version 26210
2025-10-15 04:07:13 (11144): BOINC client version: 8.2.4
2025-10-15 04:07:14 (11144): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-15 04:07:14 (11144): Successfully copied 'init_data.xml' to the shared directory.
2025-10-15 04:07:14 (11144): Create VM. (boinc_d3ca76ac38256943, slot#3)
2025-10-15 04:07:15 (11144): Setting Memory Size for VM. (4800MB)
2025-10-15 04:07:15 (11144): Setting CPU Count for VM. (8)
2025-10-15 04:07:15 (11144): Setting Chipset Options for VM.
2025-10-15 04:07:16 (11144): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-15 04:07:16 (11144): Setting Boot Options for VM.
2025-10-15 04:07:16 (11144): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-15 04:07:17 (11144): Enabling VM Network Access.
2025-10-15 04:07:17 (11144): Disabling USB Support for VM.
2025-10-15 04:07:17 (11144): Disabling COM Port Support for VM.
2025-10-15 04:07:17 (11144): Disabling LPT Port Support for VM.
2025-10-15 04:07:18 (11144): Disabling Audio Support for VM.
2025-10-15 04:07:18 (11144): Disabling Clipboard Support for VM.
2025-10-15 04:07:18 (11144): Disabling Drag and Drop Support for VM.
2025-10-15 04:07:18 (11144): Adding storage controller(s) to VM.
2025-10-15 04:07:19 (11144): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-15 04:07:21 (11144): Adding VirtualBox Guest Additions to VM.
2025-10-15 04:07:21 (11144): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-15 04:07:21 (11144): forwarding host port 56073 to guest port 80
2025-10-15 04:07:21 (11144): Enabling remote desktop for VM.
2025-10-15 04:07:22 (11144): Required extension pack not installed, remote desktop not enabled.
2025-10-15 04:07:22 (11144): Enabling shared directory for VM.
2025-10-15 04:07:22 (11144): Starting VM using VBoxManage interface. (boinc_d3ca76ac38256943, slot#3)
2025-10-15 04:07:28 (11144): Successfully started VM. (PID = '1668')
2025-10-15 04:07:28 (11144): Reporting VM Process ID to BOINC.
2025-10-15 04:07:28 (11144): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-15 04:07:28 (11144): Guest Log: CPUID EDX: 0x178bfbff
2025-10-15 04:07:28 (11144): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-15 04:07:28 (11144): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-15 04:07:28 (11144): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-15 04:07:28 (11144): Detected: Web Application Enabled (http://localhost:56073)
2025-10-15 04:07:28 (11144): Preference change detected
2025-10-15 04:07:28 (11144): Setting CPU throttle for VM. (100%)
2025-10-15 04:07:28 (11144): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-15 04:07:30 (11144): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-15 04:07:30 (11144): Guest Log: BIOS: Booting from Hard Disk...
2025-10-15 04:07:32 (11144): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-15 04:07:32 (11144): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-15 04:07:32 (11144): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-15 04:07:39 (11144): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-15 04:07:39 (11144): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-15 04:07:43 (11144): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000129 main     Log opened 2025-10-15T04:07:41.228107000Z
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000199 main     OS Product: Linux
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000225 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000281 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000312 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000313 main     Process ID: 1372
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000313 main     Package type: LINUX_64BITS_GENERIC
2025-10-15 04:07:43 (11144): Guest Log: 00:00:00.000855 main     5.2.32 r132073 started. Verbose level = 0
2025-10-15 04:07:43 (11144): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-15 04:07:43 (11144): Guest Log: [INFO] Mounting shared directory
2025-10-15 04:07:43 (11144): Guest Log: [INFO] Checking for init_data.xml
2025-10-15 04:07:46 (11144): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-15 04:07:46 (11144): Guest Log: [INFO] Detected branch: prod
2025-10-15 04:07:46 (11144): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-15 04:07:46 (11144): Guest Log: Copying input files
2025-10-15 04:07:47 (11144): Guest Log: Copied input files into RunAtlas.
2025-10-15 04:07:47 (11144): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-15 04:07:47 (11144): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-15 04:07:47 (11144): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-15 04:07:47 (11144): Guest Log: Further information can be found at the LHC@home message board.
2025-10-15 04:07:53 (11144): Guest Log: 00:00:10.004136 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 488 054 000ns (GuestNow=1 760 490 472 742 013 000 ns GuestLast=1 760 501 261 230 067 000 ns fSetTimeLastLoop=true )
2025-10-15 04:07:56 (11144): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-15 04:07:56 (11144): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-15 04:07:56 (11144): Guest Log: 2.6.3.0 1648 0 30052 151715 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-15 04:07:56 (11144): Guest Log: copied the webapp to /var/www
2025-10-15 04:07:56 (11144): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-15 04:07:56 (11144): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-15 04:07:56 (11144): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-15 04:07:56 (11144): Guest Log:  *** Starting ATLAS job. (PandaID=6839591582 taskID=46676269) ***
2025-10-15 05:11:39 (11144): Guest Log:  *** Job finished ***
2025-10-15 05:11:39 (11144): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:03,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:03,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:31,034 | INFO     | [monitor] cgroup control has ended
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:32,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310734481216)>', '<ExcThread(monitor, started 140309392516864)>']
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:32,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:32,573 | INFO     | [monitor] control thread has ended
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,443 | INFO     | all workflow threads have been joined
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,443 | INFO     | end of generic workflow (traces error code: 0)
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,443 | INFO     | traces error code: 0
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,506 [wrapper] ==== pilot stdout END ====
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,510 [wrapper] ==== wrapper stdout RESUME ====
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,515 [wrapper] pilotpid: 6076
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,519 [wrapper] Pilot exit status: 0
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,636 [wrapper] pandaids: 6839591582
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,661 [wrapper] cleanup supervisor_pilot 21847 6077
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,665 [wrapper] Test setup, not cleaning
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,671 [wrapper] apfmon messages muted
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,675 [wrapper] ==== wrapper stdout END ====
2025-10-15 05:11:39 (11144): Guest Log: 2025-10-15 02:11:37,679 [wrapper] ==== wrapper stderr END ====
2025-10-15 05:11:39 (11144): Guest Log:  *** Error codes and diagnostics ***
2025-10-15 05:11:39 (11144): Guest Log:     "exeErrorCode": 0,
2025-10-15 05:11:39 (11144): Guest Log:     "exeErrorDiag": "",
2025-10-15 05:11:39 (11144): Guest Log:     "pilotErrorCode": 0,
2025-10-15 05:11:39 (11144): Guest Log:     "pilotErrorDiag": "",
2025-10-15 05:11:39 (11144): Guest Log:  *** Listing of results directory ***
2025-10-15 05:11:39 (11144): Guest Log: total 191412
2025-10-15 05:11:39 (11144): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 06:14 pilot3.tar.gz
2025-10-15 05:11:39 (11144): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 06:38 queuedata.json
2025-10-15 05:11:39 (11144): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 06:38 runpilot2-wrapper.sh
2025-10-15 05:11:39 (11144): Guest Log: -rwxr-xr-x. 1 atlas atlas      8529 Oct 15 01:07 init_data.xml
2025-10-15 05:11:39 (11144): Guest Log: -rwxr-xr-x. 1 atlas atlas    569684 Oct 15 01:07 input.tar.gz
2025-10-15 05:11:39 (11144): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 15 01:07 start_atlas.sh
2025-10-15 05:11:39 (11144): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 15 01:07 EVNT.46676267._004517.pool.root.1 -> /data/./ATLAS.root_0
2025-10-15 05:11:39 (11144): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 15 01:07 pandaJob.out
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas    974015 Oct 15 01:08 agis_schedconf.cvmfs.json
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 15 01:08 agis_ddmendpoints.agis.ALL.json
2025-10-15 05:11:39 (11144): Guest Log: drwx------. 5 atlas atlas      4096 Oct 15 01:08 pilot3
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas 190515241 Oct 15 02:10 HITS.46676269._072846.pool.root.1
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas      1034 Oct 15 02:10 memory_monitor_summary.json
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas    298263 Oct 15 02:10 log.46676269._072846.job.log.tgz.1
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas      7828 Oct 15 02:10 heartbeat.json
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas        95 Oct 15 02:11 pilot_heartbeat.json
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 15 02:11 pilotlog.txt
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas    531726 Oct 15 02:11 log.46676269._072846.job.log.1
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas       357 Oct 15 02:11 output.list
2025-10-15 05:11:39 (11144): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 15 02:11 runtime_log
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas    849920 Oct 15 02:11 result.tar.gz
2025-10-15 05:11:39 (11144): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Oct 15 02:11 runtime_log.err
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas       652 Oct 15 02:11 aFnKDmHu4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmctiNDmTPchWn.diag
2025-10-15 05:11:39 (11144): Guest Log: Looking for outputfile HITS.46676269._072846.pool.root.1
2025-10-15 05:11:39 (11144): Guest Log: HITS file was successfully produced
2025-10-15 05:11:39 (11144): Guest Log: -rw-------. 1 atlas atlas 190515241 Oct 15 02:10 /home/atlas/RunAtlas/HITS.46676269._072846.pool.root.1
2025-10-15 05:11:40 (11144): Guest Log: Successfully finished the ATLAS job!
2025-10-15 05:11:40 (11144): Guest Log: Copying the results back to the shared directory!
2025-10-15 05:11:40 (11144): Guest Log:  *** Contents of shared directory: ***
2025-10-15 05:11:40 (11144): Guest Log: total 401892
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root 219563312 Oct 15 01:07 ATLAS.root_0
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root 190515241 Oct 15 02:11 HITS.pool.root.1
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root      8529 Oct 15 01:07 init_data.xml
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root    569684 Oct 13 08:29 input.tar.gz
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root    849920 Oct 15 02:11 result.tar.gz
2025-10-15 05:11:40 (11144): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 13 08:29 start_atlas.sh
2025-10-15 05:11:40 (11144): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-15 05:11:40 (11144): VM Completion File Detected.
2025-10-15 05:11:40 (11144): Powering off VM.
2025-10-15 05:11:40 (11144): Successfully stopped VM.
2025-10-15 05:11:40 (11144): Deregistering VM. (boinc_d3ca76ac38256943, slot#3)
2025-10-15 05:11:40 (11144): Removing network bandwidth throttle group from VM.
2025-10-15 05:11:40 (11144): Removing VM from VirtualBox.
2025-10-15 05:11:46 (11144): called boinc_finish(0)

</stderr_txt>
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