Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:43 (32255): wrapper (7.7.26015): starting
04:22:43 (32255): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:22:43] Arguments: --nthreads 8
[2025-10-13 04:22:43] Threads: 8
[2025-10-13 04:22:43] Checking for CVMFS
[2025-10-13 04:22:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:22:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:22:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:22:43] 2.11.2.0 2885 206978 78216 151654 1 56 13345382 20275200 1 130560 1 74405000 99.978 10551884 9997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:22:43] CVMFS is ok
[2025-10-13 04:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:22:43] Further information can be found at the LHC@home message board.
[2025-10-13 04:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:22:43] Checking for apptainer binary...
[2025-10-13 04:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:22:43] Running /usr/bin/apptainer --version
[2025-10-13 04:22:44] apptainer version 1.3.2-1.el7
[2025-10-13 04:22:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:22:45] c-204-6.aglt2.org
[2025-10-13 04:22:45] apptainer works
[2025-10-13 04:22:45] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:22:45] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:22:45] Starting ATLAS job with PandaID=6841068774
[2025-10-13 04:22:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:37:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:37:22] 2025-10-13 10:36:16,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:37:22] 2025-10-13 10:36:16,029 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:37:22] 2025-10-13 10:36:16,029 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,030 | INFO     | sum of deviations: -14910042242.000002
[2025-10-13 06:37:22] 2025-10-13 10:36:16,030 | INFO     | mean x: 1760347781.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,030 | INFO     | mean y: 2562140.3511450384
[2025-10-13 06:37:22] 2025-10-13 10:36:16,030 | INFO     | -- intersect: 37656495346.6208
[2025-10-13 06:37:22] 2025-10-13 10:36:16,031 | INFO     | intersect: 37656495346.6208
[2025-10-13 06:37:22] 2025-10-13 10:36:16,031 | INFO     | chi2: 2.5200468047362334
[2025-10-13 06:37:22] 2025-10-13 10:36:16,031 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,032 | INFO     | sum of deviations: -4944703462.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,032 | INFO     | mean x: 1760347628.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,032 | INFO     | mean y: 2581394.3253968256
[2025-10-13 06:37:22] 2025-10-13 10:36:16,032 | INFO     | -- intersect: 14036404184.236853
[2025-10-13 06:37:22] 2025-10-13 10:36:16,032 | INFO     | intersect: 14036404184.236853
[2025-10-13 06:37:22] 2025-10-13 10:36:16,033 | INFO     | chi2: 1.7613806458626764
[2025-10-13 06:37:22] 2025-10-13 10:36:16,033 | INFO     | current chi2=1.7613806458626764 (change=30.105240801389186 %)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,033 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,033 | INFO     | sum of deviations: -3832394540.000007
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | mean x: 1760347476.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | mean y: 2583786.4049586775
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | -- intersect: 12284432504.738346
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | intersect: 12284432504.738346
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | chi2: 1.7635273160507023
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | current chi2=1.7635273160507023 (change=-0.12187429179878179 %)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,034 | INFO     | right removable region: 120
[2025-10-13 06:37:22] 2025-10-13 10:36:16,035 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,035 | INFO     | sum of deviations: -36669898954.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,035 | INFO     | mean x: 1760347933.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | mean y: 2604681.8492063493
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | -- intersect: 104077390302.00125
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | intersect: 104077390302.00125
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | chi2: 0.9242625960455204
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | current chi2=0.9242625960455204 (change=63.32359405752146 %)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,036 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,037 | INFO     | sum of deviations: -35788853049.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,037 | INFO     | mean x: 1760348086.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,037 | INFO     | mean y: 2602689.9752066117
[2025-10-13 06:37:22] 2025-10-13 10:36:16,037 | INFO     | -- intersect: 114696804103.16812
[2025-10-13 06:37:22] 2025-10-13 10:36:16,038 | INFO     | intersect: 114696804103.16812
[2025-10-13 06:37:22] 2025-10-13 10:36:16,038 | INFO     | chi2: 0.9017997599425568
[2025-10-13 06:37:22] 2025-10-13 10:36:16,038 | INFO     | current chi2=0.9017997599425568 (change=2.4303521747035317 %)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,038 | INFO     | left removable region: 20
[2025-10-13 06:37:22] 2025-10-13 10:36:16,038 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,039 | INFO     | sum of deviations: -18821803180.500008
[2025-10-13 06:37:22] 2025-10-13 10:36:16,039 | INFO     | mean x: 1760348055.5
[2025-10-13 06:37:22] 2025-10-13 10:36:16,039 | INFO     | mean y: 2616437.69
[2025-10-13 06:37:22] 2025-10-13 10:36:16,039 | INFO     | -- intersect: 106864981136.2837
[2025-10-13 06:37:22] 2025-10-13 10:36:16,039 | INFO     | intersect: 106864981136.2837
[2025-10-13 06:37:22] 2025-10-13 10:36:16,040 | INFO     | chi2: 0.09209832099434763
[2025-10-13 06:37:22] 2025-10-13 10:36:16,040 | INFO     | -- intersect: 106864981136.2837
[2025-10-13 06:37:22] 2025-10-13 10:36:16,040 | INFO     | current memory leak: -60.71 B/s (using 100 data points, chi2=0.09)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,040 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,040 | INFO     | ..............................
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . Timing measurements:
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . get job = 0 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . initial setup = 2 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . payload setup = 8 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . stage-in = 0 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . payload execution = 7951 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . stage-out = 0 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | . log creation = 0 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,041 | INFO     | ..............................
[2025-10-13 06:37:22] 2025-10-13 10:36:16,386 | INFO     | 
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | job summary report
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | --------------------------------------------------
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | PanDA job id: 6841068774
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | task id: 46676269
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | errors: (none)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | pilot state: finished 
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | transexitcode: 0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | exeerrorcode: 0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | exeerrordiag: 
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | exitcode: 0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,388 | INFO     | exitmsg: OK
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | cpuconsumptiontime: 59589 s
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | nevents: 400
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | neventsw: 0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | pid: 10198
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | pgrp: 10198
[2025-10-13 06:37:22] 2025-10-13 10:36:16,389 | INFO     | corecount: 8
[2025-10-13 06:37:22] 2025-10-13 10:36:16,390 | INFO     | event service: False
[2025-10-13 06:37:22] 2025-10-13 10:36:16,390 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7963: 2376861, 7964: 2376860, 7965: 2386042, 7968: 2386098, 7974: 2386292}
[2025-10-13 06:37:22] 2025-10-13 10:36:16,390 | INFO     | --------------------------------------------------
[2025-10-13 06:37:22] 2025-10-13 10:36:16,390 | INFO     | 
[2025-10-13 06:37:22] 2025-10-13 10:36:16,390 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:37:22] 2025-10-13 10:36:16,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:37:22] 2025-10-13 10:36:16,424 | INFO     | job 6841068774 has completed (purged errors)
[2025-10-13 06:37:22] 2025-10-13 10:36:16,424 | INFO     | overall cleanup function is called
[2025-10-13 06:37:22] 2025-10-13 10:36:17,432 | INFO     | --- collectZombieJob: --- 10, [10198]
[2025-10-13 06:37:22] 2025-10-13 10:36:17,432 | INFO     | zombie collector waiting for pid 10198
[2025-10-13 06:37:22] 2025-10-13 10:36:17,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:37:22] 2025-10-13 10:36:17,432 | INFO     | collected zombie processes
[2025-10-13 06:37:22] 2025-10-13 10:36:17,433 | INFO     | will attempt to kill all subprocesses of pid=10198
[2025-10-13 06:37:22] 2025-10-13 10:36:17,525 | INFO     | process IDs to be killed: [10198] (in reverse order)
[2025-10-13 06:37:22] 2025-10-13 10:36:17,581 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:37:22] 2025-10-13 10:36:17,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:37:22] 2025-10-13 10:36:17,586 | INFO     | did not find any defunct processes belonging to 10198
[2025-10-13 06:37:22] 2025-10-13 10:36:17,589 | INFO     | did not find any defunct processes belonging to 10198
[2025-10-13 06:37:22] 2025-10-13 10:36:17,589 | INFO     | ready for new job
[2025-10-13 06:37:22] 2025-10-13 10:36:17,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:37:22] 2025-10-13 10:36:17,592 | INFO     | ***************************************
[2025-10-13 06:37:22] 2025-10-13 10:36:17,592 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:37:22] 2025-10-13 10:36:17,592 | INFO     | ***************************************
[2025-10-13 06:37:22] 2025-10-13 10:36:17,592 | INFO     | 
[2025-10-13 06:37:22] 2025-10-13 10:36:17,593 | INFO     | architecture information:
[2025-10-13 06:37:22] 2025-10-13 10:36:17,593 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:37:22] 2025-10-13 10:36:17,613 | INFO     | cat /etc/os-release:
[2025-10-13 06:37:22] NAME="CentOS Linux"
[2025-10-13 06:37:22] VERSION="7 (Core)"
[2025-10-13 06:37:22] ID="centos"
[2025-10-13 06:37:22] ID_LIKE="rhel fedora"
[2025-10-13 06:37:22] VERSION_ID="7"
[2025-10-13 06:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:37:22] ANSI_COLOR="0;31"
[2025-10-13 06:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:37:22] HOME_URL="https://www.centos.org/"
[2025-10-13 06:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:37:22] 
[2025-10-13 06:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:37:22] 
[2025-10-13 06:37:22] 2025-10-13 10:36:17,613 | INFO     | ***************************************
[2025-10-13 06:37:22] 2025-10-13 10:36:18,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:37:22] 2025-10-13 10:36:18,137 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-10-13 06:37:22] 2025-10-13 10:36:18,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:37:22] 2025-10-13 10:36:18,138 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:37:22] 2025-10-13 10:36:18,138 | INFO     | update_server=False
[2025-10-13 06:37:22] 2025-10-13 10:36:18,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:37:22] 2025-10-13 10:36:18,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:37:22] 2025-10-13 10:36:18,169 | INFO     | all payload control threads have been joined
[2025-10-13 06:37:22] 2025-10-13 10:36:18,228 | INFO     | all data control threads have been joined
[2025-10-13 06:37:22] 2025-10-13 10:36:18,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:37:22] 2025-10-13 10:36:18,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:37:22] 2025-10-13 10:36:18,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:37:22] 2025-10-13 10:36:18,268 | INFO     | will abort loop
[2025-10-13 06:37:22] 2025-10-13 10:36:18,750 | INFO     | all job control threads have been joined
[2025-10-13 06:37:22] 2025-10-13 10:36:19,144 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,170 | INFO     | [payload] control thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,177 | INFO     | [job] validate thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,231 | INFO     | [data] control thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,272 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,392 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,617 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,756 | INFO     | [job] control thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:19,883 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:20,145 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:20,627 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:20,628 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:20,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:37:22] 2025-10-13 10:36:21,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:37:22] 2025-10-13 10:36:22,149 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:24,763 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:28,944 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:37:22] 2025-10-13 10:36:29,950 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:37:22] 2025-10-13 10:36:48,855 | INFO     | PID=3624 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 06:37:22] 2025-10-13 10:36:48,855 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:37:22] 2025-10-13 10:36:48,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:37:22] 2025-10-13 10:36:48,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:37:22] 2025-10-13 10:37:16,525 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:37:22] 2025-10-13 10:37:16,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703323883328)>', '<ExcThread(monitor, started 140703011149568)>']
[2025-10-13 06:37:22] 2025-10-13 10:37:16,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:37:22] 2025-10-13 10:37:16,984 | INFO     | [monitor] control thread has ended
[2025-10-13 06:37:22] 2025-10-13 10:37:21,974 | INFO     | all workflow threads have been joined
[2025-10-13 06:37:22] 2025-10-13 10:37:21,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:37:22] 2025-10-13 10:37:21,981 | INFO     | traces error code: 0
[2025-10-13 06:37:22] 2025-10-13 10:37:21,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:37:22] 2025-10-13 10:37:22,084 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:37:22] 2025-10-13 10:37:22,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:37:22] 2025-10-13 10:37:22,094 [wrapper] pilotpid: 3624
[2025-10-13 06:37:22] 2025-10-13 10:37:22,098 [wrapper] Pilot exit status: 0
[2025-10-13 06:37:22] 2025-10-13 10:37:22,117 [wrapper] pandaids: 6841068774
[2025-10-13 06:37:22] 2025-10-13 10:37:22,173 [wrapper] cleanup supervisor_pilot  3452 3625
[2025-10-13 06:37:22] 2025-10-13 10:37:22,178 [wrapper] Test setup, not cleaning
[2025-10-13 06:37:22] 2025-10-13 10:37:22,184 [wrapper] apfmon messages muted
[2025-10-13 06:37:22] 2025-10-13 10:37:22,188 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:37:22] 2025-10-13 10:37:22,193 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:37:22]  *** Error codes and diagnostics ***
[2025-10-13 06:37:22]     "exeErrorCode": 0,
[2025-10-13 06:37:22]     "exeErrorDiag": "",
[2025-10-13 06:37:22]     "pilotErrorCode": 0,
[2025-10-13 06:37:22]     "pilotErrorDiag": "",
[2025-10-13 06:37:22]  *** Listing of results directory ***
[2025-10-13 06:37:22] total 420876
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:19 queuedata.json
[2025-10-13 06:37:22] -rwx------ 1 boincer umatlas     36292 Oct 12 20:20 runpilot2-wrapper.sh
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:37:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:22 run_atlas
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:22 job.xml
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas 219318402 Oct 13 04:22 EVNT.46676267._004687.pool.root.1
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 06:37:22] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:22 shared
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:22 input.tar.gz
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:22 boinc_lockfile
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:22 pandaJob.out
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas    972857 Oct 13 04:23 agis_schedconf.cvmfs.json
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas   1560580 Oct 13 04:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:37:22] drwx------ 5 boincer umatlas      4096 Oct 13 04:23 pilot3
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas       529 Oct 13 06:35 boinc_task_state.xml
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas 204780232 Oct 13 06:35 HITS.46676269._093010.pool.root.1
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas        95 Oct 13 06:36 pilot_heartbeat.json
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas      1051 Oct 13 06:36 memory_monitor_summary.json
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas    369687 Oct 13 06:36 log.46676269._093010.job.log.tgz.1
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas      7849 Oct 13 06:36 heartbeat.json
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 06:36 init_data.xml
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:37 boinc_mmap_file
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:37 wrapper_checkpoint.txt
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas      5003 Oct 13 06:37 pilotlog.txt
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas   1118866 Oct 13 06:37 log.46676269._093010.job.log.1
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas       357 Oct 13 06:37 output.list
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:37 runtime_log
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas   1505280 Oct 13 06:37 result.tar.gz
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas       658 Oct 13 06:37 xTKODmhTLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJMVMDm08ovNm.diag
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 06:37 runtime_log.err
[2025-10-13 06:37:22] -rw-r--r-- 1 boincer umatlas     20893 Oct 13 06:37 stderr.txt
[2025-10-13 06:37:22] HITS file was successfully produced:
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas 204780232 Oct 13 06:35 shared/HITS.pool.root.1
[2025-10-13 06:37:22]  *** Contents of shared directory: ***
[2025-10-13 06:37:22] total 416216
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas 219318402 Oct 13 04:22 ATLAS.root_0
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:22 start_atlas.sh
[2025-10-13 06:37:22] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:22 input.tar.gz
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas 204780232 Oct 13 06:35 HITS.pool.root.1
[2025-10-13 06:37:22] -rw------- 1 boincer umatlas   1505280 Oct 13 06:37 result.tar.gz
06:37:23 (32255): run_atlas exited; CPU time 59544.413034
06:37:23 (32255): called boinc_finish(0)

</stderr_txt>
]]>

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