Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:56:39 (31809): wrapper (7.7.26015): starting
19:56:39 (31809): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 19:56:39] Arguments: --nthreads 8
[2025-10-13 19:56:39] Threads: 8
[2025-10-13 19:56:39] Checking for CVMFS
[2025-10-13 19:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:56:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:56:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:56:41] 2.11.2.0 29536 25099 81640 151668 2 60 20811463 25165825 4632 130560 0 6831096 99.924 2276977 1346 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 19:56:41] CVMFS is ok
[2025-10-13 19:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:56:41] Checking for apptainer binary...
[2025-10-13 19:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:56:41] Running /usr/bin/apptainer --version
[2025-10-13 19:56:41] apptainer version 1.3.2-1.el7
[2025-10-13 19:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:56:49] cg-vwn448.simple-grid.lan
[2025-10-13 19:56:49] apptainer works
[2025-10-13 19:56:49] Set ATHENA_PROC_NUMBER=8
[2025-10-13 19:56:49] Set ATHENA_CORE_NUMBER=8
[2025-10-13 19:56:49] Starting ATLAS job with PandaID=6840970404
[2025-10-13 19:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:09:04]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:09:04] 2025-10-13 22:08:17,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:09:04] 2025-10-13 22:08:18,057 | INFO     | time since job start (14871s) is within the limit (172800.0s)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,335 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 00:09:04] 2025-10-13 22:08:19,336 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-14 00:09:04] 2025-10-13 22:08:19,338 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6840970404/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,339 | INFO     | extracted standard info from prmon json
[2025-10-14 00:09:04] 2025-10-13 22:08:19,339 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 00:09:04] 2025-10-13 22:08:19,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 00:09:04] 2025-10-13 22:08:19,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 00:09:04] 2025-10-13 22:08:19,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 00:09:04] 2025-10-13 22:08:19,344 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:09:04] 2025-10-13 22:08:19,345 | INFO     | sum of square deviations: 4024149870.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,347 | INFO     | sum of deviations: 48331310831.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,347 | INFO     | mean x: 1760386043.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,347 | INFO     | mean y: 2464723.1617021277
[2025-10-14 00:09:04] 2025-10-13 22:08:19,347 | INFO     | -- intersect: -21140327611.95258
[2025-10-14 00:09:04] 2025-10-13 22:08:19,348 | INFO     | intersect: -21140327611.95258
[2025-10-14 00:09:04] 2025-10-13 22:08:19,348 | INFO     | chi2: 3.5630003053304944
[2025-10-14 00:09:04] 2025-10-13 22:08:19,349 | INFO     | sum of square deviations: 3772712597.5
[2025-10-14 00:09:04] 2025-10-13 22:08:19,351 | INFO     | sum of deviations: 62442314072.99999
[2025-10-14 00:09:04] 2025-10-13 22:08:19,351 | INFO     | mean x: 1760385890.5
[2025-10-14 00:09:04] 2025-10-13 22:08:19,351 | INFO     | mean y: 2473119.2782608694
[2025-10-14 00:09:04] 2025-10-13 22:08:19,351 | INFO     | -- intersect: -29133742752.85558
[2025-10-14 00:09:04] 2025-10-13 22:08:19,351 | INFO     | intersect: -29133742752.85558
[2025-10-14 00:09:04] 2025-10-13 22:08:19,352 | INFO     | chi2: 2.80564949961794
[2025-10-14 00:09:04] 2025-10-13 22:08:19,352 | INFO     | current chi2=2.80564949961794 (change=21.255984867009555 %)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,352 | INFO     | right removable region: 229
[2025-10-14 00:09:04] 2025-10-13 22:08:19,352 | INFO     | sum of square deviations: 3772712597.5
[2025-10-14 00:09:04] 2025-10-13 22:08:19,354 | INFO     | sum of deviations: -8925435881.000004
[2025-10-14 00:09:04] 2025-10-13 22:08:19,355 | INFO     | mean x: 1760386195.5
[2025-10-14 00:09:04] 2025-10-13 22:08:19,355 | INFO     | mean y: 2499246.9304347825
[2025-10-14 00:09:04] 2025-10-13 22:08:19,355 | INFO     | -- intersect: 4167198705.920377
[2025-10-14 00:09:04] 2025-10-13 22:08:19,355 | INFO     | intersect: 4167198705.920377
[2025-10-14 00:09:04] 2025-10-13 22:08:19,355 | INFO     | chi2: 0.8372714399478407
[2025-10-14 00:09:04] 2025-10-13 22:08:19,356 | INFO     | current chi2=0.8372714399478407 (change=76.50094391810114 %)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,356 | INFO     | sum of square deviations: 3531973200.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,358 | INFO     | sum of deviations: -14901016499.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,358 | INFO     | mean x: 1760386348.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,358 | INFO     | mean y: 2503014.2444444443
[2025-10-14 00:09:04] 2025-10-13 22:08:19,358 | INFO     | -- intersect: 7429384400.593118
[2025-10-14 00:09:04] 2025-10-13 22:08:19,359 | INFO     | intersect: 7429384400.593118
[2025-10-14 00:09:04] 2025-10-13 22:08:19,359 | INFO     | chi2: 0.7980843421702728
[2025-10-14 00:09:04] 2025-10-13 22:08:19,359 | INFO     | current chi2=0.7980843421702728 (change=4.680333749352436 %)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,359 | INFO     | left removable region: 20
[2025-10-14 00:09:04] 2025-10-13 22:08:19,360 | INFO     | sum of square deviations: 2830787960.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,361 | INFO     | sum of deviations: -1506636865.0000007
[2025-10-14 00:09:04] 2025-10-13 22:08:19,361 | INFO     | mean x: 1760386470.0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,361 | INFO     | mean y: 2513626.909090909
[2025-10-14 00:09:04] 2025-10-13 22:08:19,362 | INFO     | -- intersect: 939448215.3793689
[2025-10-14 00:09:04] 2025-10-13 22:08:19,362 | INFO     | intersect: 939448215.3793689
[2025-10-14 00:09:04] 2025-10-13 22:08:19,362 | INFO     | chi2: 0.0053372706323862665
[2025-10-14 00:09:04] 2025-10-13 22:08:19,362 | INFO     | -- intersect: 939448215.3793689
[2025-10-14 00:09:04] 2025-10-13 22:08:19,362 | INFO     | current memory leak: -0.53 B/s (using 209 data points, chi2=0.01)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,363 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,363 | INFO     | ..............................
[2025-10-14 00:09:04] 2025-10-13 22:08:19,363 | INFO     | . Timing measurements:
[2025-10-14 00:09:04] 2025-10-13 22:08:19,363 | INFO     | . get job = 0 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,363 | INFO     | . initial setup = 5 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | . payload setup = 127 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | . stage-in = 0 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | . payload execution = 14448 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | . stage-out = 3 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | . log creation = 0 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,364 | INFO     | ..............................
[2025-10-14 00:09:04] 2025-10-13 22:08:19,483 | INFO     | 
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | job summary report
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | --------------------------------------------------
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | PanDA job id: 6840970404
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | task id: 46676269
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | errors: (none)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | pilot state: finished 
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | transexitcode: 0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,484 | INFO     | exeerrorcode: 0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | exeerrordiag: 
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | exitcode: 0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | exitmsg: OK
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | cpuconsumptiontime: 54531 s
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | nevents: 400
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | neventsw: 0
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | pid: 9800
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | pgrp: 9800
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | corecount: 8
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | event service: False
[2025-10-14 00:09:04] 2025-10-13 22:08:19,485 | INFO     | sizes: {0: 2348029, 1: 2348715, 2: 2348914, 13: 2348914, 23: 2348970, 34: 2348998, 45: 2349154, 56: 2349182, 66: 2349210, 77: 2349238, 88: 2349294, 90: 2349864, 98
[2025-10-14 00:09:04] 2025-10-13 22:08:19,486 | INFO     | --------------------------------------------------
[2025-10-14 00:09:04] 2025-10-13 22:08:19,486 | INFO     | 
[2025-10-14 00:09:04] 2025-10-13 22:08:19,486 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-10-14 00:09:04] 2025-10-13 22:08:19,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:09:04] 2025-10-13 22:08:19,515 | INFO     | job 6840970404 has completed (purged errors)
[2025-10-14 00:09:04] 2025-10-13 22:08:19,516 | INFO     | overall cleanup function is called
[2025-10-14 00:09:04] 2025-10-13 22:08:20,526 | INFO     | --- collectZombieJob: --- 10, [9800]
[2025-10-14 00:09:04] 2025-10-13 22:08:20,526 | INFO     | zombie collector waiting for pid 9800
[2025-10-14 00:09:04] 2025-10-13 22:08:20,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:09:04] 2025-10-13 22:08:20,526 | INFO     | collected zombie processes
[2025-10-14 00:09:04] 2025-10-13 22:08:20,526 | INFO     | will attempt to kill all subprocesses of pid=9800
[2025-10-14 00:09:04] 2025-10-13 22:08:20,637 | INFO     | process IDs to be killed: [9800] (in reverse order)
[2025-10-14 00:09:04] 2025-10-13 22:08:20,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:09:04] 2025-10-13 22:08:20,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:09:04] 2025-10-13 22:08:20,723 | INFO     | did not find any defunct processes belonging to 9800
[2025-10-14 00:09:04] 2025-10-13 22:08:20,726 | INFO     | did not find any defunct processes belonging to 9800
[2025-10-14 00:09:04] 2025-10-13 22:08:20,726 | INFO     | ready for new job
[2025-10-14 00:09:04] 2025-10-13 22:08:20,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:09:04] 2025-10-13 22:08:20,731 | INFO     | ***************************************
[2025-10-14 00:09:04] 2025-10-13 22:08:20,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 00:09:04] 2025-10-13 22:08:20,731 | INFO     | ***************************************
[2025-10-14 00:09:04] 2025-10-13 22:08:20,732 | INFO     | 
[2025-10-14 00:09:04] 2025-10-13 22:08:20,732 | INFO     | pilot is running in a VM
[2025-10-14 00:09:04] 2025-10-13 22:08:20,732 | INFO     | architecture information:
[2025-10-14 00:09:04] 2025-10-13 22:08:20,733 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:09:04] 2025-10-13 22:08:20,837 | INFO     | cat /etc/os-release:
[2025-10-14 00:09:04] NAME="CentOS Linux"
[2025-10-14 00:09:04] VERSION="7 (Core)"
[2025-10-14 00:09:04] ID="centos"
[2025-10-14 00:09:04] ID_LIKE="rhel fedora"
[2025-10-14 00:09:04] VERSION_ID="7"
[2025-10-14 00:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:09:04] ANSI_COLOR="0;31"
[2025-10-14 00:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:09:04] HOME_URL="https://www.centos.org/"
[2025-10-14 00:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:09:04] 
[2025-10-14 00:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:09:04] 
[2025-10-14 00:09:04] 2025-10-13 22:08:20,837 | INFO     | ***************************************
[2025-10-14 00:09:04] 2025-10-13 22:08:21,340 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-10-14 00:09:04] 2025-10-13 22:08:21,549 | INFO     | sufficient remaining disk space (496397975552 B)
[2025-10-14 00:09:04] 2025-10-13 22:08:21,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:09:04] 2025-10-13 22:08:21,549 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:09:04] 2025-10-13 22:08:21,550 | INFO     | update_server=False
[2025-10-14 00:09:04] 2025-10-13 22:08:21,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:09:04] 2025-10-13 22:08:21,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:09:04] 2025-10-13 22:08:21,550 | INFO     | aborting loop
[2025-10-14 00:09:04] 2025-10-13 22:08:21,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:09:04] 2025-10-13 22:08:22,031 | INFO     | all data control threads have been joined
[2025-10-14 00:09:04] 2025-10-13 22:08:22,556 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:22,556 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:22,577 | INFO     | all payload control threads have been joined
[2025-10-14 00:09:04] 2025-10-13 22:08:22,756 | INFO     | [job] validate thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,037 | INFO     | [data] control thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,188 | INFO     | all job control threads have been joined
[2025-10-14 00:09:04] 2025-10-13 22:08:23,302 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,306 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,391 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,557 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,583 | INFO     | [payload] control thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,800 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,880 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:23,932 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:24,194 | INFO     | [job] control thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:24,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:09:04] 2025-10-13 22:08:24,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:09:04] 2025-10-13 22:08:25,506 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:28,540 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:09:04] 2025-10-13 22:08:51,232 | INFO     | PID=3232 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-14 00:09:04] 2025-10-13 22:08:51,232 | INFO     | .. there are 9 such processes running
[2025-10-14 00:09:04] 2025-10-13 22:08:51,233 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:09:04] 2025-10-13 22:08:51,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:09:04] 2025-10-13 22:08:51,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:09:04] 2025-10-13 22:08:53,207 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:09:04] 2025-10-13 22:08:54,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647882024768)>', '<ExcThread(monitor, started 139647654684416)>']
[2025-10-14 00:09:04] 2025-10-13 22:08:55,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:09:04] 2025-10-13 22:08:55,258 | INFO     | [monitor] control thread has ended
[2025-10-14 00:09:04] 2025-10-13 22:08:59,631 | INFO     | all workflow threads have been joined
[2025-10-14 00:09:04] 2025-10-13 22:08:59,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:09:04] 2025-10-13 22:08:59,631 | INFO     | traces error code: 0
[2025-10-14 00:09:04] 2025-10-13 22:08:59,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:09:04] 2025-10-13 22:08:59,882 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:09:04] 2025-10-13 22:08:59,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:09:04] 2025-10-13 22:09:00,047 [wrapper] pilotpid: 3232
[2025-10-14 00:09:04] 2025-10-13 22:09:00,140 [wrapper] Pilot exit status: 0
[2025-10-14 00:09:04] 2025-10-13 22:09:00,496 [wrapper] pandaids: 6840970404
[2025-10-14 00:09:04] 2025-10-13 22:09:01,434 [wrapper] cleanup supervisor_pilot 18954 3233
[2025-10-14 00:09:04] 2025-10-13 22:09:01,528 [wrapper] Test setup, not cleaning
[2025-10-14 00:09:04] 2025-10-13 22:09:01,625 [wrapper] apfmon messages muted
[2025-10-14 00:09:04] 2025-10-13 22:09:01,691 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:09:04] 2025-10-13 22:09:01,733 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:09:04]  *** Error codes and diagnostics ***
[2025-10-14 00:09:04]     "exeErrorCode": 0,
[2025-10-14 00:09:04]     "exeErrorDiag": "",
[2025-10-14 00:09:04]     "pilotErrorCode": 0,
[2025-10-14 00:09:04]     "pilotErrorDiag": "",
[2025-10-14 00:09:04]  *** Listing of results directory ***
[2025-10-14 00:09:04] total 411292
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc    557409 Oct 13 01:51 pilot3.tar.gz
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc      5112 Oct 13 01:57 queuedata.json
[2025-10-14 00:09:04] -rwx------. 1 boinc boinc     36292 Oct 13 01:59 runpilot2-wrapper.sh
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc       100 Oct 13 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:09:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 19:56 run_atlas
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc       105 Oct 13 19:56 job.xml
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc      6391 Oct 13 19:56 init_data.xml
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc 219007497 Oct 13 19:56 EVNT.46676267._004678.pool.root.1
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc     15120 Oct 13 19:56 start_atlas.sh
[2025-10-14 00:09:04] drwxrwx--x. 2 boinc boinc        68 Oct 13 19:56 shared
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc    569678 Oct 13 19:56 input.tar.gz
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc         0 Oct 13 19:56 boinc_lockfile
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc      2550 Oct 13 19:56 pandaJob.out
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc    972791 Oct 13 20:00 agis_schedconf.cvmfs.json
[2025-10-14 00:09:04] drwx------. 5 boinc boinc      4096 Oct 13 20:00 pilot3
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc 193351360 Oct 14 00:05 HITS.46676269._092741.pool.root.1
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc       531 Oct 14 00:05 boinc_task_state.xml
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc      1018 Oct 14 00:06 memory_monitor_summary.json
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc   1560580 Oct 14 00:06 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc    476104 Oct 14 00:06 log.46676269._092741.job.log.tgz.1
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc      7782 Oct 14 00:08 heartbeat.json
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc      8192 Oct 14 00:08 boinc_mmap_file
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc        28 Oct 14 00:08 wrapper_checkpoint.txt
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc        95 Oct 14 00:08 pilot_heartbeat.json
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc      4884 Oct 14 00:08 pilotlog.txt
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc   1985752 Oct 14 00:09 log.46676269._092741.job.log.1
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc       357 Oct 14 00:09 output.list
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc       620 Oct 14 00:09 runtime_log
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc   2478080 Oct 14 00:09 result.tar.gz
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc       657 Oct 14 00:09 UIPODm78KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT8lNDmsvFoJn.diag
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc      8717 Oct 14 00:09 runtime_log.err
[2025-10-14 00:09:04] -rw-r--r--. 1 boinc boinc     20800 Oct 14 00:09 stderr.txt
[2025-10-14 00:09:04] HITS file was successfully produced:
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc 193351360 Oct 14 00:05 shared/HITS.pool.root.1
[2025-10-14 00:09:04]  *** Contents of shared directory: ***
[2025-10-14 00:09:04] total 405692
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc 219007497 Oct 13 19:56 ATLAS.root_0
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc     15120 Oct 13 19:56 start_atlas.sh
[2025-10-14 00:09:04] -rw-r--r--. 2 boinc boinc    569678 Oct 13 19:56 input.tar.gz
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc 193351360 Oct 14 00:05 HITS.pool.root.1
[2025-10-14 00:09:04] -rw-------. 1 boinc boinc   2478080 Oct 14 00:09 result.tar.gz
00:09:05 (31809): run_atlas exited; CPU time 54725.975404
00:09:05 (31809): called boinc_finish(0)

</stderr_txt>
]]>

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