Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:00 (4056676): wrapper (7.7.26015): starting
04:18:00 (4056676): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 04:18:00] Arguments: --nthreads 4
[2025-10-13 04:18:00] Threads: 4
[2025-10-13 04:18:00] Checking for CVMFS
[2025-10-13 04:18:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:18:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:18:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:18:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:18:00] 2.13.2.0 3732220 7763 57996 151653 2 188 2768877 4096001 13740 130560 0 53977134 99.999 393364 1257 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 04:18:00] CVMFS is ok
[2025-10-13 04:18:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:18:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 04:18:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 04:18:00] Further information can be found at the LHC@home message board.
[2025-10-13 04:18:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:18:00] Checking for apptainer binary...
[2025-10-13 04:18:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:18:00] Running /usr/bin/apptainer --version
[2025-10-13 04:18:00] apptainer version 1.4.3
[2025-10-13 04:18:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:18:00] T7810-Ubuntu
[2025-10-13 04:18:00] apptainer works
[2025-10-13 04:18:00] Set ATHENA_PROC_NUMBER=4
[2025-10-13 04:18:00] Set ATHENA_CORE_NUMBER=4
[2025-10-13 04:18:00] Starting ATLAS job with PandaID=6840849971
[2025-10-13 04:18:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:47:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:47:40] 2025-10-13 11:46:52,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:47:40] 2025-10-13 11:46:52,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:47:40] 2025-10-13 11:46:52,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:47:40] 2025-10-13 11:46:52,092 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:47:40] 2025-10-13 11:46:52,092 | INFO     | sum of square deviations: 2671343110.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,094 | INFO     | sum of deviations: 17867689523.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,094 | INFO     | mean x: 1760349745.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,094 | INFO     | mean y: 2308191.83902439
[2025-10-13 07:47:40] 2025-10-13 11:46:52,094 | INFO     | -- intersect: -11772062003.366722
[2025-10-13 07:47:40] 2025-10-13 11:46:52,094 | INFO     | intersect: -11772062003.366722
[2025-10-13 07:47:40] 2025-10-13 11:46:52,095 | INFO     | chi2: 1.515494810054067
[2025-10-13 07:47:40] 2025-10-13 11:46:52,095 | INFO     | sum of square deviations: 2480604650.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,097 | INFO     | sum of deviations: 17296020184.499992
[2025-10-13 07:47:40] 2025-10-13 11:46:52,097 | INFO     | mean x: 1760349592.5
[2025-10-13 07:47:40] 2025-10-13 11:46:52,097 | INFO     | mean y: 2307737.075
[2025-10-13 07:47:40] 2025-10-13 11:46:52,097 | INFO     | -- intersect: -12271732821.405907
[2025-10-13 07:47:40] 2025-10-13 11:46:52,097 | INFO     | intersect: -12271732821.405907
[2025-10-13 07:47:40] 2025-10-13 11:46:52,098 | INFO     | chi2: 1.5163355271919956
[2025-10-13 07:47:40] 2025-10-13 11:46:52,098 | INFO     | current chi2=1.5163355271919956 (change=-0.05547476192931038 %)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,098 | INFO     | right removable region: 199
[2025-10-13 07:47:40] 2025-10-13 11:46:52,098 | INFO     | sum of square deviations: 2480604650.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,099 | INFO     | sum of deviations: -11778561431.000002
[2025-10-13 07:47:40] 2025-10-13 11:46:52,100 | INFO     | mean x: 1760349897.5
[2025-10-13 07:47:40] 2025-10-13 11:46:52,100 | INFO     | mean y: 2331635.3
[2025-10-13 07:47:40] 2025-10-13 11:46:52,100 | INFO     | -- intersect: 8360934610.489258
[2025-10-13 07:47:40] 2025-10-13 11:46:52,100 | INFO     | intersect: 8360934610.489258
[2025-10-13 07:47:40] 2025-10-13 11:46:52,101 | INFO     | chi2: 0.027922069498363983
[2025-10-13 07:47:40] 2025-10-13 11:46:52,101 | INFO     | current chi2=0.027922069498363983 (change=98.15756086308419 %)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,101 | INFO     | sum of square deviations: 2299168690.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,102 | INFO     | sum of deviations: -12688972706.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,103 | INFO     | mean x: 1760350050.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,103 | INFO     | mean y: 2332379.9076923076
[2025-10-13 07:47:40] 2025-10-13 11:46:52,103 | INFO     | -- intersect: 9717597655.834764
[2025-10-13 07:47:40] 2025-10-13 11:46:52,103 | INFO     | intersect: 9717597655.834764
[2025-10-13 07:47:40] 2025-10-13 11:46:52,103 | INFO     | chi2: 0.020743613841234795
[2025-10-13 07:47:40] 2025-10-13 11:46:52,104 | INFO     | current chi2=0.020743613841234795 (change=25.7088954583033 %)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,104 | INFO     | sum of square deviations: 2126802667.5
[2025-10-13 07:47:40] 2025-10-13 11:46:52,105 | INFO     | sum of deviations: -10679823178.500002
[2025-10-13 07:47:40] 2025-10-13 11:46:52,105 | INFO     | mean x: 1760350202.5
[2025-10-13 07:47:40] 2025-10-13 11:46:52,105 | INFO     | mean y: 2330600.3421052634
[2025-10-13 07:47:40] 2025-10-13 11:46:52,106 | INFO     | -- intersect: 8841998324.210367
[2025-10-13 07:47:40] 2025-10-13 11:46:52,106 | INFO     | intersect: 8841998324.210367
[2025-10-13 07:47:40] 2025-10-13 11:46:52,106 | INFO     | chi2: 0.01946945244950079
[2025-10-13 07:47:40] 2025-10-13 11:46:52,106 | INFO     | current chi2=0.01946945244950079 (change=6.142427262125312 %)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,106 | INFO     | left removable region: 30
[2025-10-13 07:47:40] 2025-10-13 11:46:52,107 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | sum of deviations: -3185909281.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | mean x: 1760350477.0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | mean y: 2323085.0177514795
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | -- intersect: 3749543294.825288
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | intersect: 3749543294.825288
[2025-10-13 07:47:40] 2025-10-13 11:46:52,108 | INFO     | chi2: 0.003917058884715144
[2025-10-13 07:47:40] 2025-10-13 11:46:52,109 | INFO     | -- intersect: 3749543294.825288
[2025-10-13 07:47:40] 2025-10-13 11:46:52,109 | INFO     | current memory leak: -2.13 B/s (using 169 data points, chi2=0.00)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,109 | INFO     | could have reported an average CPU frequency of 2628 MHz (10 samples)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | ..............................
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . Timing measurements:
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . get job = 0 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . initial setup = 3 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . payload setup = 6 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . stage-in = 0 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . payload execution = 12480 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . stage-out = 3 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | . log creation = 0 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,110 | INFO     | ..............................
[2025-10-13 07:47:40] 2025-10-13 11:46:52,221 | INFO     | 
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | job summary report
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | --------------------------------------------------
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | PanDA job id: 6840849971
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | task id: 46676269
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | errors: (none)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:47:40] 2025-10-13 11:46:52,222 | INFO     | pilot state: finished 
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | transexitcode: 0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | exeerrorcode: 0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | exeerrordiag: 
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | exitcode: 0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | exitmsg: OK
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | cpuconsumptiontime: 48321 s
[2025-10-13 07:47:40] 2025-10-13 11:46:52,223 | INFO     | nevents: 400
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | neventsw: 0
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | pid: 4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | pgrp: 4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | corecount: 4
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | event service: False
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | sizes: {0: 2348872, 1: 2348872, 5: 2349162, 11: 2349218, 12490: 2378699, 12494: 2387727, 12496: 2387911, 12501: 2388105}
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | --------------------------------------------------
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | 
[2025-10-13 07:47:40] 2025-10-13 11:46:52,224 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/10
[2025-10-13 07:47:40] 2025-10-13 11:46:52,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:47:40] 2025-10-13 11:46:52,258 | INFO     | job 6840849971 has completed (purged errors)
[2025-10-13 07:47:40] 2025-10-13 11:46:52,258 | INFO     | overall cleanup function is called
[2025-10-13 07:47:40] 2025-10-13 11:46:53,266 | INFO     | --- collectZombieJob: --- 10, [4069853]
[2025-10-13 07:47:40] 2025-10-13 11:46:53,266 | INFO     | zombie collector waiting for pid 4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:53,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:47:40] 2025-10-13 11:46:53,266 | INFO     | collected zombie processes
[2025-10-13 07:47:40] 2025-10-13 11:46:53,267 | INFO     | will attempt to kill all subprocesses of pid=4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:53,790 | INFO     | process IDs to be killed: [4069853] (in reverse order)
[2025-10-13 07:47:40] 2025-10-13 11:46:53,913 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:47:40] 2025-10-13 11:46:53,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:47:40] 2025-10-13 11:46:53,926 | INFO     | did not find any defunct processes belonging to 4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:53,940 | INFO     | did not find any defunct processes belonging to 4069853
[2025-10-13 07:47:40] 2025-10-13 11:46:53,940 | INFO     | ready for new job
[2025-10-13 07:47:40] 2025-10-13 11:46:53,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:47:40] 2025-10-13 11:46:53,943 | INFO     | ***************************************
[2025-10-13 07:47:40] 2025-10-13 11:46:53,943 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:47:40] 2025-10-13 11:46:53,943 | INFO     | ***************************************
[2025-10-13 07:47:40] 2025-10-13 11:46:53,944 | INFO     | 
[2025-10-13 07:47:40] 2025-10-13 11:46:53,947 | INFO     | architecture information:
[2025-10-13 07:47:40] 2025-10-13 11:46:53,948 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:47:40] 2025-10-13 11:46:53,963 | INFO     | cat /etc/os-release:
[2025-10-13 07:47:40] NAME="CentOS Linux"
[2025-10-13 07:47:40] VERSION="7 (Core)"
[2025-10-13 07:47:40] ID="centos"
[2025-10-13 07:47:40] ID_LIKE="rhel fedora"
[2025-10-13 07:47:40] VERSION_ID="7"
[2025-10-13 07:47:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:47:40] ANSI_COLOR="0;31"
[2025-10-13 07:47:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:47:40] HOME_URL="https://www.centos.org/"
[2025-10-13 07:47:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:47:40] 
[2025-10-13 07:47:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:47:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:47:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:47:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:47:40] 
[2025-10-13 07:47:40] 2025-10-13 11:46:53,964 | INFO     | ***************************************
[2025-10-13 07:47:40] 2025-10-13 11:46:54,466 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/10
[2025-10-13 07:47:40] 2025-10-13 11:46:54,486 | INFO     | sufficient remaining disk space (398341439488 B)
[2025-10-13 07:47:40] 2025-10-13 11:46:54,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:47:40] 2025-10-13 11:46:54,486 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:47:40] 2025-10-13 11:46:54,486 | INFO     | update_server=False
[2025-10-13 07:47:40] 2025-10-13 11:46:54,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:47:40] 2025-10-13 11:46:54,758 | INFO     | all payload control threads have been joined
[2025-10-13 07:47:40] 2025-10-13 11:46:54,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:47:40] 2025-10-13 11:46:54,891 | INFO     | aborting loop
[2025-10-13 07:47:40] 2025-10-13 11:46:55,249 | INFO     | all data control threads have been joined
[2025-10-13 07:47:40] 2025-10-13 11:46:55,492 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:55,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:47:40] 2025-10-13 11:46:55,731 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:55,763 | INFO     | [payload] control thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:55,764 | INFO     | all job control threads have been joined
[2025-10-13 07:47:40] 2025-10-13 11:46:55,894 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:55,964 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,254 | INFO     | [data] control thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,330 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,349 | INFO     | [job] validate thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,696 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,769 | INFO     | [job] control thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,880 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:56,921 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:57,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:47:40] 2025-10-13 11:46:57,542 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:46:57,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:47:40] 2025-10-13 11:46:58,237 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:47:01,851 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:47:40] 2025-10-13 11:47:24,637 | INFO     | PID=4061033 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:47:40] 2025-10-13 11:47:24,637 | INFO     | .. there are 16 such processes running
[2025-10-13 07:47:40] 2025-10-13 11:47:24,638 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:47:40] 2025-10-13 11:47:24,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:47:40] 2025-10-13 11:47:24,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:47:40] 2025-10-13 11:47:34,985 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:47:40] 2025-10-13 11:47:35,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130888408221504)>', '<ExcThread(monitor, started 130887786166016)>']
[2025-10-13 07:47:40] 2025-10-13 11:47:35,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:47:40] 2025-10-13 11:47:35,693 | INFO     | [monitor] control thread has ended
[2025-10-13 07:47:40] 2025-10-13 11:47:40,051 | INFO     | all workflow threads have been joined
[2025-10-13 07:47:40] 2025-10-13 11:47:40,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:47:40] 2025-10-13 11:47:40,051 | INFO     | traces error code: 0
[2025-10-13 07:47:40] 2025-10-13 11:47:40,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:47:40] 2025-10-13 11:47:40,197 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:47:40] 2025-10-13 11:47:40,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:47:40] 2025-10-13 11:47:40,204 [wrapper] pilotpid: 4061033
[2025-10-13 07:47:40] 2025-10-13 11:47:40,207 [wrapper] Pilot exit status: 0
[2025-10-13 07:47:40] 2025-10-13 11:47:40,219 [wrapper] pandaids: 6840849971
[2025-10-13 07:47:40] 2025-10-13 11:47:40,299 [wrapper] cleanup supervisor_pilot  395199 4061034
[2025-10-13 07:47:40] 2025-10-13 11:47:40,303 [wrapper] Test setup, not cleaning
[2025-10-13 07:47:40] 2025-10-13 11:47:40,306 [wrapper] apfmon messages muted
[2025-10-13 07:47:40] 2025-10-13 11:47:40,308 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:47:40] 2025-10-13 11:47:40,311 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:47:40]  *** Error codes and diagnostics ***
[2025-10-13 07:47:40]     "exeErrorCode": 0,
[2025-10-13 07:47:40]     "exeErrorDiag": "",
[2025-10-13 07:47:40]     "pilotErrorCode": 0,
[2025-10-13 07:47:40]     "pilotErrorDiag": "",
[2025-10-13 07:47:40]  *** Listing of results directory ***
[2025-10-13 07:47:40] total 419928
[2025-10-13 07:47:40] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 07:47:40] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 18:00 runpilot2-wrapper.sh
[2025-10-13 07:47:40] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 18:00 queuedata.json
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 13 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:47:40] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 13 04:17 run_atlas
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 13 04:17 job.xml
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd 223560042 Oct 13 04:18 EVNT.46676267._004054.pool.root.1
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 07:47:40] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 13 04:18 shared
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd    569673 Oct 13 04:18 input.tar.gz
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 13 04:18 init_data.xml
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 04:18 boinc_setup_complete
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 04:18 boinc_lockfile
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 13 04:18 pandaJob.out
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd    972849 Oct 13 04:18 agis_schedconf.cvmfs.json
[2025-10-13 07:47:40] drwx------ 5 whitlerd whitlerd      4096 Oct 13 04:18 pilot3
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd 198252695 Oct 13 07:46 HITS.46676269._090563.pool.root.1
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 13 07:46 boinc_task_state.xml
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd      1034 Oct 13 07:46 memory_monitor_summary.json
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd   1560580 Oct 13 07:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd    376766 Oct 13 07:46 log.46676269._090563.job.log.tgz.1
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd      7789 Oct 13 07:46 heartbeat.json
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd        95 Oct 13 07:47 pilot_heartbeat.json
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 13 07:47 boinc_mmap_file
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 13 07:47 wrapper_checkpoint.txt
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd      4840 Oct 13 07:47 pilotlog.txt
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd   1766122 Oct 13 07:47 log.46676269._090563.job.log.1
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd       357 Oct 13 07:47 output.list
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 13 07:47 runtime_log
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd   2160640 Oct 13 07:47 result.tar.gz
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd       651 Oct 13 07:47 zYwLDmSIJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8llNDmq9VWam.diag
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 13 07:47 runtime_log.err
[2025-10-13 07:47:40] -rw-rw-r-- 1 whitlerd whitlerd     20994 Oct 13 07:47 stderr.txt
[2025-10-13 07:47:40] HITS file was successfully produced:
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd 198252695 Oct 13 07:46 shared/HITS.pool.root.1
[2025-10-13 07:47:40]  *** Contents of shared directory: ***
[2025-10-13 07:47:40] total 414628
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd 223560042 Oct 13 04:18 ATLAS.root_0
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 07:47:40] -rw-r--r-- 2 whitlerd whitlerd    569673 Oct 13 04:18 input.tar.gz
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd 198252695 Oct 13 07:46 HITS.pool.root.1
[2025-10-13 07:47:40] -rw------- 1 whitlerd whitlerd   2160640 Oct 13 07:47 result.tar.gz
07:47:41 (4056676): run_atlas exited; CPU time 48978.114124
07:47:41 (4056676): called boinc_finish(0)

</stderr_txt>
]]>

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