Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:00 (142947): wrapper (7.7.26015): starting
22:52:00 (142947): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 22:52:00] Arguments: --nthreads 12
[2025-10-13 22:52:00] Threads: 12
[2025-10-13 22:52:00] Checking for CVMFS
[2025-10-13 22:52:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:52:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:52:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:52:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:52:00] 2.13.2.0 8705 35217 120860 151672 0 188 40640724 46080000 922 130560 0 63882654 99.997 1181705 793 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 22:52:00] CVMFS is ok
[2025-10-13 22:52:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 22:52:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 22:52:00] Further information can be found at the LHC@home message board.
[2025-10-13 22:52:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:52:00] Checking for apptainer binary...
[2025-10-13 22:52:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:52:00] Running /usr/bin/apptainer --version
[2025-10-13 22:52:00] apptainer version 1.4.2-1.el9
[2025-10-13 22:52:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:52:01] gpu01.farm.particle.cz
[2025-10-13 22:52:01] apptainer works
[2025-10-13 22:52:01] Set ATHENA_PROC_NUMBER=12
[2025-10-13 22:52:01] Set ATHENA_CORE_NUMBER=12
[2025-10-13 22:52:01] Starting ATLAS job with PandaID=6841069657
[2025-10-13 22:52:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:32:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:32:17]  scope=mc23_13p6TeV
[2025-10-13 23:32:17]  status=None
[2025-10-13 23:32:17]  status_code=0
[2025-10-13 23:32:17]  storage_token=
[2025-10-13 23:32:17]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6841069657/log.46676269._093697.job.log.tgz.1
[2025-10-13 23:32:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/bc/log.46676269._093697.job.log.tgz.1
[2025-10-13 23:32:17]  workdir=None
[2025-10-13 23:32:17] ]
[2025-10-13 23:32:17] 2025-10-13 21:31:06,178 | INFO     | transferring file log.46676269._093697.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6841069657/log.46676269._093697.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 23:32:17] 2025-10-13 21:31:06,179 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6841069657/log.46676269._093697.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._093697.job
[2025-10-13 23:32:17] 2025-10-13 21:31:06,193 | INFO     | adding to output.list: log.46676269._093697.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/bc/log.46676269._093697.job.log.tg
[2025-10-13 23:32:17] 2025-10-13 21:31:06,194 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 23:32:17] 2025-10-13 21:31:06,194 | INFO     | summary of transferred files:
[2025-10-13 23:32:17] 2025-10-13 21:31:06,194 | INFO     |  -- lfn=log.46676269._093697.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 23:32:17] 2025-10-13 21:31:06,194 | INFO     | stage-out finished correctly
[2025-10-13 23:32:17] 2025-10-13 21:31:06,599 | INFO     | time since job start (2337s) is within the limit (172800.0s)
[2025-10-13 23:32:17] 2025-10-13 21:31:07,628 | INFO     | monitor loop #180: job 0:6841069657 is in state 'finished'
[2025-10-13 23:32:17] 2025-10-13 21:31:07,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:32:17] 2025-10-13 21:31:08,605 | INFO     | time since job start (2339s) is within the limit (172800.0s)
[2025-10-13 23:32:17] 2025-10-13 21:31:08,681 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 23:32:17] 2025-10-13 21:31:10,133 | INFO     | monitor loop #181: job 0:6841069657 is in state 'finished'
[2025-10-13 23:32:17] 2025-10-13 21:31:10,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:32:17] 2025-10-13 21:31:10,611 | INFO     | time since job start (2341s) is within the limit (172800.0s)
[2025-10-13 23:32:17] 2025-10-13 21:31:11,172 | INFO     | job 6841069657 has state=finished
[2025-10-13 23:32:17] 2025-10-13 21:31:11,172 | INFO     | preparing for final server update for job 6841069657 in state='finished'
[2025-10-13 23:32:17] 2025-10-13 21:31:11,173 | INFO     | this job has now completed (state=finished)
[2025-10-13 23:32:17] 2025-10-13 21:31:11,173 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 23:32:17] 2025-10-13 21:31:11,173 | INFO     | log transfer has been attempted: DONE
[2025-10-13 23:32:17] 2025-10-13 21:31:11,173 | INFO     | job 6841069657 has finished - writing final server update
[2025-10-13 23:32:17] 2025-10-13 21:31:11,173 | INFO     | total number of processed events: 400 (read)
[2025-10-13 23:32:17] 2025-10-13 21:31:11,174 | INFO     | executing command: lscpu
[2025-10-13 23:32:17] 2025-10-13 21:31:11,198 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 23:32:17] 2025-10-13 21:31:12,616 | INFO     | time since job start (2343s) is within the limit (172800.0s)
[2025-10-13 23:32:17] 2025-10-13 21:31:12,637 | INFO     | monitor loop #182: job 0:6841069657 is in state 'finished'
[2025-10-13 23:32:17] 2025-10-13 21:31:12,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,054 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 23:32:17] 2025-10-13 21:31:14,058 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3212.898812499999
[2025-10-13 23:32:17] 2025-10-13 21:31:14,063 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6841069657/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,064 | INFO     | extracted standard info from prmon json
[2025-10-13 23:32:17] 2025-10-13 21:31:14,064 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 23:32:17] 2025-10-13 21:31:14,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 23:32:17] 2025-10-13 21:31:14,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 23:32:17] 2025-10-13 21:31:14,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | fitting pss+swap vs Time
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | sum of square deviations: 9228080.0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | sum of deviations: -1469209522.0000002
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | mean x: 1760389970.0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | mean y: 2815731.5483870967
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | -- intersect: 280275820122.2012
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | intersect: 280275820122.2012
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | chi2: 0.0313385296711328
[2025-10-13 23:32:17] 2025-10-13 21:31:14,066 | INFO     | -- intersect: 280275820122.2012
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | current memory leak: -159.21 B/s (using 31 data points, chi2=0.03)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | could have reported an average CPU frequency of 3225 MHz (5 samples)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | ..............................
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . Timing measurements:
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . get job = 0 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . initial setup = 2 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . payload setup = 3 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . stage-in = 0 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . payload execution = 2315 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . stage-out = 0 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | . log creation = 0 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,067 | INFO     | ..............................
[2025-10-13 23:32:17] 2025-10-13 21:31:14,120 | INFO     | 
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | job summary report
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | --------------------------------------------------
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | PanDA job id: 6841069657
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | task id: 46676269
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | errors: (none)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | pilot state: finished 
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | transexitcode: 0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | exeerrorcode: 0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | exeerrordiag: 
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | exitcode: 0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | exitmsg: OK
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | cpuconsumptiontime: 25466 s
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | nevents: 400
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | neventsw: 0
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | pid: 153486
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | pgrp: 153486
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | corecount: 12
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | event service: False
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | sizes: {0: 2348029, 1: 2348885, 4: 2349147, 11: 2349175, 2322: 2374408, 2323: 2383406, 2326: 2383590, 2331: 2383816}
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | --------------------------------------------------
[2025-10-13 23:32:17] 2025-10-13 21:31:14,121 | INFO     | 
[2025-10-13 23:32:17] 2025-10-13 21:31:14,122 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 23:32:17] 2025-10-13 21:31:14,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | job 6841069657 has completed (purged errors)
[2025-10-13 23:32:17] 2025-10-13 21:31:14,136 | INFO     | overall cleanup function is called
[2025-10-13 23:32:17] 2025-10-13 21:31:15,144 | INFO     | --- collectZombieJob: --- 10, [153486]
[2025-10-13 23:32:17] 2025-10-13 21:31:15,145 | INFO     | zombie collector waiting for pid 153486
[2025-10-13 23:32:17] 2025-10-13 21:31:15,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:32:17] 2025-10-13 21:31:15,145 | INFO     | collected zombie processes
[2025-10-13 23:32:17] 2025-10-13 21:31:15,145 | INFO     | will attempt to kill all subprocesses of pid=153486
[2025-10-13 23:32:17] 2025-10-13 21:31:15,227 | INFO     | process IDs to be killed: [153486] (in reverse order)
[2025-10-13 23:32:17] 2025-10-13 21:31:15,265 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:32:17] 2025-10-13 21:31:15,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:32:17] 2025-10-13 21:31:15,268 | INFO     | did not find any defunct processes belonging to 153486
[2025-10-13 23:32:17] 2025-10-13 21:31:15,271 | INFO     | did not find any defunct processes belonging to 153486
[2025-10-13 23:32:17] 2025-10-13 21:31:15,271 | INFO     | ready for new job
[2025-10-13 23:32:17] 2025-10-13 21:31:15,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:32:17] 2025-10-13 21:31:15,272 | INFO     | ***************************************
[2025-10-13 23:32:17] 2025-10-13 21:31:15,272 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:32:17] 2025-10-13 21:31:15,272 | INFO     | ***************************************
[2025-10-13 23:32:17] 2025-10-13 21:31:15,272 | INFO     | 
[2025-10-13 23:32:17] 2025-10-13 21:31:15,273 | INFO     | architecture information:
[2025-10-13 23:32:17] 2025-10-13 21:31:15,274 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:32:17] 2025-10-13 21:31:15,285 | INFO     | cat /etc/os-release:
[2025-10-13 23:32:17] NAME="CentOS Linux"
[2025-10-13 23:32:17] VERSION="7 (Core)"
[2025-10-13 23:32:17] ID="centos"
[2025-10-13 23:32:17] ID_LIKE="rhel fedora"
[2025-10-13 23:32:17] VERSION_ID="7"
[2025-10-13 23:32:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:32:17] ANSI_COLOR="0;31"
[2025-10-13 23:32:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:32:17] HOME_URL="https://www.centos.org/"
[2025-10-13 23:32:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:32:17] 
[2025-10-13 23:32:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:32:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:32:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:32:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:32:17] 
[2025-10-13 23:32:17] 2025-10-13 21:31:15,285 | INFO     | ***************************************
[2025-10-13 23:32:17] 2025-10-13 21:31:15,788 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | INFO     | sufficient remaining disk space (58893271040 B)
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | INFO     | update_server=False
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:32:17] 2025-10-13 21:31:15,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:32:17] 2025-10-13 21:31:16,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:32:17] 2025-10-13 21:31:16,145 | INFO     | aborting loop
[2025-10-13 23:32:17] 2025-10-13 21:31:16,340 | INFO     | all data control threads have been joined
[2025-10-13 23:32:17] 2025-10-13 21:31:16,388 | INFO     | all job control threads have been joined
[2025-10-13 23:32:17] 2025-10-13 21:31:16,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:32:17] 2025-10-13 21:31:16,806 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:16,807 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:16,991 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,107 | INFO     | all payload control threads have been joined
[2025-10-13 23:32:17] 2025-10-13 21:31:17,151 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,345 | INFO     | [data] control thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,394 | INFO     | [job] control thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,843 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,861 | INFO     | [job] validate thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,908 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,937 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:17,986 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:18,113 | INFO     | [payload] control thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:18,765 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:19,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:32:17] 2025-10-13 21:31:23,246 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:26,455 | INFO     | job.realtimelogging is not enabled
[2025-10-13 23:32:17] 2025-10-13 21:31:27,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:32:17] 2025-10-13 21:31:45,798 | INFO     | PID=146828 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 23:32:17] 2025-10-13 21:31:45,798 | INFO     | .. there are 2 such processes running
[2025-10-13 23:32:17] 2025-10-13 21:31:45,798 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:32:17] 2025-10-13 21:31:45,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:32:17] 2025-10-13 21:31:45,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:32:17] 2025-10-13 21:32:12,161 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:32:17] 2025-10-13 21:32:12,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522315052864)>', '<ExcThread(monitor, started 140521959827200)>']
[2025-10-13 23:32:17] 2025-10-13 21:32:12,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:32:17] 2025-10-13 21:32:12,935 | INFO     | [monitor] control thread has ended
[2025-10-13 23:32:17] 2025-10-13 21:32:17,642 | INFO     | all workflow threads have been joined
[2025-10-13 23:32:17] 2025-10-13 21:32:17,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:32:17] 2025-10-13 21:32:17,642 | INFO     | traces error code: 0
[2025-10-13 23:32:17] 2025-10-13 21:32:17,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:32:17] 2025-10-13 21:32:17,713 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:32:17] 2025-10-13 21:32:17,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:32:17] 2025-10-13 21:32:17,717 [wrapper] pilotpid: 146828
[2025-10-13 23:32:17] 2025-10-13 21:32:17,719 [wrapper] Pilot exit status: 0
[2025-10-13 23:32:17] 2025-10-13 21:32:17,726 [wrapper] pandaids: 6841069657
[2025-10-13 23:32:17] 2025-10-13 21:32:17,752 [wrapper] cleanup supervisor_pilot  194411 146829
[2025-10-13 23:32:17] 2025-10-13 21:32:17,754 [wrapper] Test setup, not cleaning
[2025-10-13 23:32:17] 2025-10-13 21:32:17,756 [wrapper] apfmon messages muted
[2025-10-13 23:32:17] 2025-10-13 21:32:17,758 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:32:17] 2025-10-13 21:32:17,760 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:32:17]  *** Error codes and diagnostics ***
[2025-10-13 23:32:17]     "exeErrorCode": 0,
[2025-10-13 23:32:17]     "exeErrorDiag": "",
[2025-10-13 23:32:17]     "pilotErrorCode": 0,
[2025-10-13 23:32:17]     "pilotErrorDiag": "",
[2025-10-13 23:32:17]  *** Listing of results directory ***
[2025-10-13 23:32:17] total 409892
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:56 queuedata.json
[2025-10-13 23:32:17] -rwx------ 1 boinc boinc     36292 Oct 13 02:56 runpilot2-wrapper.sh
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc       100 Oct 13 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:32:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 22:52 run_atlas
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc       105 Oct 13 22:52 job.xml
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc 221887981 Oct 13 22:52 EVNT.46676267._004714.pool.root.1
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:52 start_atlas.sh
[2025-10-13 23:32:17] drwxrwx--x 2 boinc boinc      4096 Oct 13 22:52 shared
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc    569677 Oct 13 22:52 input.tar.gz
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc      9445 Oct 13 22:52 init_data.xml
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 22:52 boinc_lockfile
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc      2550 Oct 13 22:52 pandaJob.out
[2025-10-13 23:32:17] -rw------- 1 boinc boinc    972799 Oct 13 22:52 agis_schedconf.cvmfs.json
[2025-10-13 23:32:17] -rw------- 1 boinc boinc   1560580 Oct 13 22:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:32:17] drwx------ 5 boinc boinc      4096 Oct 13 22:52 pilot3
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc       529 Oct 13 23:30 boinc_task_state.xml
[2025-10-13 23:32:17] -rw------- 1 boinc boinc 192459496 Oct 13 23:30 HITS.46676269._093697.pool.root.1
[2025-10-13 23:32:17] -rw------- 1 boinc boinc      1013 Oct 13 23:31 memory_monitor_summary.json
[2025-10-13 23:32:17] -rw------- 1 boinc boinc    364456 Oct 13 23:31 log.46676269._093697.job.log.tgz.1
[2025-10-13 23:32:17] -rw------- 1 boinc boinc      7772 Oct 13 23:31 heartbeat.json
[2025-10-13 23:32:17] -rw------- 1 boinc boinc        95 Oct 13 23:31 pilot_heartbeat.json
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc        27 Oct 13 23:32 wrapper_checkpoint.txt
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc      8192 Oct 13 23:32 boinc_mmap_file
[2025-10-13 23:32:17] -rw------- 1 boinc boinc      4894 Oct 13 23:32 pilotlog.txt
[2025-10-13 23:32:17] -rw------- 1 boinc boinc    376523 Oct 13 23:32 log.46676269._093697.job.log.1
[2025-10-13 23:32:17] -rw------- 1 boinc boinc       357 Oct 13 23:32 output.list
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:32 runtime_log
[2025-10-13 23:32:17] -rw------- 1 boinc boinc    757760 Oct 13 23:32 result.tar.gz
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc      8740 Oct 13 23:32 runtime_log.err
[2025-10-13 23:32:17] -rw------- 1 boinc boinc       658 Oct 13 23:32 BI3LDmm2LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbHmNDmzo5Usm.diag
[2025-10-13 23:32:17] -rw-r--r-- 1 boinc boinc     21915 Oct 13 23:32 stderr.txt
[2025-10-13 23:32:17] HITS file was successfully produced:
[2025-10-13 23:32:17] -rw------- 1 boinc boinc 192459496 Oct 13 23:30 shared/HITS.pool.root.1
[2025-10-13 23:32:17]  *** Contents of shared directory: ***
[2025-10-13 23:32:17] total 405964
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc 221887981 Oct 13 22:52 ATLAS.root_0
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:52 start_atlas.sh
[2025-10-13 23:32:17] -rw-r--r-- 2 boinc boinc    569677 Oct 13 22:52 input.tar.gz
[2025-10-13 23:32:17] -rw------- 1 boinc boinc 192459496 Oct 13 23:30 HITS.pool.root.1
[2025-10-13 23:32:17] -rw------- 1 boinc boinc    757760 Oct 13 23:32 result.tar.gz
23:32:19 (142947): run_atlas exited; CPU time 25480.322850
23:32:19 (142947): called boinc_finish(0)

</stderr_txt>
]]>

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