Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:02 (12615): wrapper (7.7.26015): starting
22:50:02 (12615): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 22:50:02] Arguments: --nthreads 8
[2025-10-13 22:50:02] Threads: 8
[2025-10-13 22:50:02] Checking for CVMFS
[2025-10-13 22:50:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:50:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:50:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:50:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:50:05] 2.11.2.0 17769 222332 138588 151672 2 61 21796224 25165825 4632 130560 0 116361554 99.887 67716533 3047 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 22:50:05] CVMFS is ok
[2025-10-13 22:50:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:50:05] Checking for apptainer binary...
[2025-10-13 22:50:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:50:05] Running /usr/bin/apptainer --version
[2025-10-13 22:50:06] apptainer version 1.3.2-1.el7
[2025-10-13 22:50:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:50:20] cg-vwn290.simple-grid.lan
[2025-10-13 22:50:20] apptainer works
[2025-10-13 22:50:20] Set ATHENA_PROC_NUMBER=8
[2025-10-13 22:50:20] Set ATHENA_CORE_NUMBER=8
[2025-10-13 22:50:20] Starting ATLAS job with PandaID=6840853854
[2025-10-13 22:50:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 02:49:36]  *** The last 200 lines of the pilot log: ***
[2025-10-14 02:49:36] 2025-10-14 00:48:29,335 | INFO     | fitting pss+swap vs Time
[2025-10-14 02:49:36] 2025-10-14 00:48:29,336 | INFO     | sum of square deviations: 3392567795.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,338 | INFO     | sum of deviations: 99232120666.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,338 | INFO     | mean x: 1760396056.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,338 | INFO     | mean y: 2418913.085585586
[2025-10-14 02:49:36] 2025-10-14 00:48:29,338 | INFO     | -- intersect: -51488912853.71057
[2025-10-14 02:49:36] 2025-10-14 00:48:29,338 | INFO     | intersect: -51488912853.71057
[2025-10-14 02:49:36] 2025-10-14 00:48:29,339 | INFO     | chi2: 6.909635153814594
[2025-10-14 02:49:36] 2025-10-14 00:48:29,339 | INFO     | sum of square deviations: 3168461268.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,341 | INFO     | sum of deviations: 111316148838.99992
[2025-10-14 02:49:36] 2025-10-14 00:48:29,341 | INFO     | mean x: 1760395904.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,341 | INFO     | mean y: 2426953.811059908
[2025-10-14 02:49:36] 2025-10-14 00:48:29,341 | INFO     | -- intersect: -61844784007.65487
[2025-10-14 02:49:36] 2025-10-14 00:48:29,341 | INFO     | intersect: -61844784007.65487
[2025-10-14 02:49:36] 2025-10-14 00:48:29,342 | INFO     | chi2: 6.19582785438996
[2025-10-14 02:49:36] 2025-10-14 00:48:29,342 | INFO     | current chi2=6.19582785438996 (change=10.33060767369986 %)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,342 | INFO     | right removable region: 216
[2025-10-14 02:49:36] 2025-10-14 00:48:29,342 | INFO     | sum of square deviations: 3168461268.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,344 | INFO     | sum of deviations: 23262919983.99997
[2025-10-14 02:49:36] 2025-10-14 00:48:29,344 | INFO     | mean x: 1760396209.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,344 | INFO     | mean y: 2470563.0184331797
[2025-10-14 02:49:36] 2025-10-14 00:48:29,344 | INFO     | -- intersect: -12922401381.5118
[2025-10-14 02:49:36] 2025-10-14 00:48:29,344 | INFO     | intersect: -12922401381.5118
[2025-10-14 02:49:36] 2025-10-14 00:48:29,345 | INFO     | chi2: 2.128754760780261
[2025-10-14 02:49:36] 2025-10-14 00:48:29,345 | INFO     | current chi2=2.128754760780261 (change=69.19150268585395 %)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,345 | INFO     | sum of square deviations: 2954447953.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | sum of deviations: -13046372163.500002
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | mean x: 1760396361.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | mean y: 2496255.1650943398
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | -- intersect: 7776126541.689315
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | intersect: 7776126541.689315
[2025-10-14 02:49:36] 2025-10-14 00:48:29,347 | INFO     | chi2: 0.8266954463715301
[2025-10-14 02:49:36] 2025-10-14 00:48:29,348 | INFO     | current chi2=0.8266954463715301 (change=61.165303697617176 %)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,348 | INFO     | sum of square deviations: 2750295288.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,349 | INFO     | sum of deviations: -17081354322.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,349 | INFO     | mean x: 1760396514.0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | mean y: 2499250.053140097
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | -- intersect: 10935854927.913588
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | intersect: 10935854927.913588
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | chi2: 0.7977771511815049
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | current chi2=0.7977771511815049 (change=3.4980590877754585 %)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,350 | INFO     | left removable region: 30
[2025-10-14 02:49:36] 2025-10-14 00:48:29,351 | INFO     | sum of square deviations: 1995283922.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,352 | INFO     | sum of deviations: -4049130528.9999995
[2025-10-14 02:49:36] 2025-10-14 00:48:29,352 | INFO     | mean x: 1760396788.5
[2025-10-14 02:49:36] 2025-10-14 00:48:29,352 | INFO     | mean y: 2510514.0215053763
[2025-10-14 02:49:36] 2025-10-14 00:48:29,352 | INFO     | -- intersect: 3574972708.0423694
[2025-10-14 02:49:36] 2025-10-14 00:48:29,352 | INFO     | intersect: 3574972708.0423694
[2025-10-14 02:49:36] 2025-10-14 00:48:29,353 | INFO     | chi2: 0.006568109538971357
[2025-10-14 02:49:36] 2025-10-14 00:48:29,353 | INFO     | -- intersect: 3574972708.0423694
[2025-10-14 02:49:36] 2025-10-14 00:48:29,353 | INFO     | current memory leak: -2.03 B/s (using 186 data points, chi2=0.01)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,353 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,353 | INFO     | ..............................
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . Timing measurements:
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . get job = 0 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . initial setup = 8 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . payload setup = 136 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . stage-in = 0 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . payload execution = 13637 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . stage-out = 3 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | . log creation = 1 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,354 | INFO     | ..............................
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | 
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | job summary report
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | --------------------------------------------------
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | PanDA job id: 6840853854
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | task id: 46676269
[2025-10-14 02:49:36] 2025-10-14 00:48:29,509 | INFO     | errors: (none)
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | pilot state: finished 
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | transexitcode: 0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | exeerrorcode: 0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | exeerrordiag: 
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | exitcode: 0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | exitmsg: OK
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | cpuconsumptiontime: 50746 s
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | nevents: 400
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | neventsw: 0
[2025-10-14 02:49:36] 2025-10-14 00:48:29,510 | INFO     | pid: 22979
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | pgrp: 22979
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | corecount: 8
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | event service: False
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 22: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 65: 2349182, 76: 2349210, 87: 2349266, 88: 2349556, 97: 2349864, 1
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | --------------------------------------------------
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | 
[2025-10-14 02:49:36] 2025-10-14 00:48:29,511 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-14 02:49:36] 2025-10-14 00:48:30,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 02:49:36] 2025-10-14 00:48:30,020 | INFO     | job 6840853854 has completed (purged errors)
[2025-10-14 02:49:36] 2025-10-14 00:48:30,021 | INFO     | overall cleanup function is called
[2025-10-14 02:49:36] 2025-10-14 00:48:30,482 | INFO     | PID=16388 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 02:49:36] 2025-10-14 00:48:30,483 | INFO     | .. there are 9 such processes running
[2025-10-14 02:49:36] 2025-10-14 00:48:31,029 | INFO     | --- collectZombieJob: --- 10, [22979]
[2025-10-14 02:49:36] 2025-10-14 00:48:31,029 | INFO     | zombie collector waiting for pid 22979
[2025-10-14 02:49:36] 2025-10-14 00:48:31,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 02:49:36] 2025-10-14 00:48:31,029 | INFO     | collected zombie processes
[2025-10-14 02:49:36] 2025-10-14 00:48:31,029 | INFO     | will attempt to kill all subprocesses of pid=22979
[2025-10-14 02:49:36] 2025-10-14 00:48:31,132 | INFO     | process IDs to be killed: [22979] (in reverse order)
[2025-10-14 02:49:36] 2025-10-14 00:48:32,082 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 02:49:36] 2025-10-14 00:48:32,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 02:49:36] 2025-10-14 00:48:32,086 | INFO     | did not find any defunct processes belonging to 22979
[2025-10-14 02:49:36] 2025-10-14 00:48:32,089 | INFO     | did not find any defunct processes belonging to 22979
[2025-10-14 02:49:36] 2025-10-14 00:48:32,089 | INFO     | ready for new job
[2025-10-14 02:49:36] 2025-10-14 00:48:32,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 02:49:36] 2025-10-14 00:48:32,091 | INFO     | ***************************************
[2025-10-14 02:49:36] 2025-10-14 00:48:32,091 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 02:49:36] 2025-10-14 00:48:32,091 | INFO     | ***************************************
[2025-10-14 02:49:36] 2025-10-14 00:48:32,091 | INFO     | 
[2025-10-14 02:49:36] 2025-10-14 00:48:32,098 | INFO     | pilot is running in a VM
[2025-10-14 02:49:36] 2025-10-14 00:48:32,098 | INFO     | architecture information:
[2025-10-14 02:49:36] 2025-10-14 00:48:32,122 | INFO     | executing command: cat /etc/os-release
[2025-10-14 02:49:36] 2025-10-14 00:48:32,329 | INFO     | cat /etc/os-release:
[2025-10-14 02:49:36] NAME="CentOS Linux"
[2025-10-14 02:49:36] VERSION="7 (Core)"
[2025-10-14 02:49:36] ID="centos"
[2025-10-14 02:49:36] ID_LIKE="rhel fedora"
[2025-10-14 02:49:36] VERSION_ID="7"
[2025-10-14 02:49:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 02:49:36] ANSI_COLOR="0;31"
[2025-10-14 02:49:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 02:49:36] HOME_URL="https://www.centos.org/"
[2025-10-14 02:49:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 02:49:36] 
[2025-10-14 02:49:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 02:49:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 02:49:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 02:49:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 02:49:36] 
[2025-10-14 02:49:36] 2025-10-14 00:48:32,330 | INFO     | ***************************************
[2025-10-14 02:49:36] 2025-10-14 00:48:32,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-14 02:49:36] 2025-10-14 00:48:32,955 | INFO     | sufficient remaining disk space (496008953856 B)
[2025-10-14 02:49:36] 2025-10-14 00:48:32,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 02:49:36] 2025-10-14 00:48:32,956 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 02:49:36] 2025-10-14 00:48:32,956 | INFO     | update_server=False
[2025-10-14 02:49:36] 2025-10-14 00:48:32,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 02:49:36] 2025-10-14 00:48:32,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 02:49:36] 2025-10-14 00:48:32,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:49:36] 2025-10-14 00:48:32,959 | INFO     | aborting loop
[2025-10-14 02:49:36] 2025-10-14 00:48:33,321 | INFO     | all payload control threads have been joined
[2025-10-14 02:49:36] 2025-10-14 00:48:33,914 | INFO     | all data control threads have been joined
[2025-10-14 02:49:36] 2025-10-14 00:48:33,962 | INFO     | [job] retrieve thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:33,965 | INFO     | [job] job monitor thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,331 | INFO     | [payload] control thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,517 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:49:36] 2025-10-14 00:48:34,573 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,595 | INFO     | all job control threads have been joined
[2025-10-14 02:49:36] 2025-10-14 00:48:34,881 | INFO     | [payload] validate_post thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,920 | INFO     | [data] control thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,965 | INFO     | [data] copytool_out thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,977 | INFO     | [job] validate thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:34,984 | INFO     | [data] copytool_in thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:35,016 | INFO     | [payload] failed_post thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:35,438 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:35,533 | INFO     | [job] queue monitor thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:35,601 | INFO     | [job] control thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:48:36,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 02:49:36] 2025-10-14 00:48:40,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 02:49:36] 2025-10-14 00:49:02,607 | INFO     | PID=16388 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 02:49:36] 2025-10-14 00:49:02,607 | INFO     | .. there are 9 such processes running
[2025-10-14 02:49:36] 2025-10-14 00:49:02,607 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 02:49:36] 2025-10-14 00:49:02,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 02:49:36] 2025-10-14 00:49:02,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 02:49:36] 2025-10-14 00:49:27,753 | INFO     | [monitor] cgroup control has ended
[2025-10-14 02:49:36] 2025-10-14 00:49:28,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216489121600)>', '<ExcThread(monitor, started 140215901476608)>']
[2025-10-14 02:49:36] 2025-10-14 00:49:28,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 02:49:36] 2025-10-14 00:49:28,763 | INFO     | [monitor] control thread has ended
[2025-10-14 02:49:36] 2025-10-14 00:49:33,625 | INFO     | all workflow threads have been joined
[2025-10-14 02:49:36] 2025-10-14 00:49:33,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 02:49:36] 2025-10-14 00:49:33,625 | INFO     | traces error code: 0
[2025-10-14 02:49:36] 2025-10-14 00:49:33,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 02:49:36] 2025-10-14 00:49:33,981 [wrapper] ==== pilot stdout END ====
[2025-10-14 02:49:36] 2025-10-14 00:49:34,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 02:49:36] 2025-10-14 00:49:34,177 [wrapper] pilotpid: 16388
[2025-10-14 02:49:36] 2025-10-14 00:49:34,217 [wrapper] Pilot exit status: 0
[2025-10-14 02:49:36] 2025-10-14 00:49:34,548 [wrapper] pandaids: 6840853854
[2025-10-14 02:49:36] 2025-10-14 00:49:35,581 [wrapper] cleanup supervisor_pilot 14753 16389
[2025-10-14 02:49:36] 2025-10-14 00:49:35,635 [wrapper] Test setup, not cleaning
[2025-10-14 02:49:36] 2025-10-14 00:49:35,725 [wrapper] apfmon messages muted
[2025-10-14 02:49:36] 2025-10-14 00:49:35,803 [wrapper] ==== wrapper stdout END ====
[2025-10-14 02:49:36] 2025-10-14 00:49:35,893 [wrapper] ==== wrapper stderr END ====
[2025-10-14 02:49:36]  *** Error codes and diagnostics ***
[2025-10-14 02:49:36]     "exeErrorCode": 0,
[2025-10-14 02:49:36]     "exeErrorDiag": "",
[2025-10-14 02:49:36]     "pilotErrorCode": 0,
[2025-10-14 02:49:36]     "pilotErrorDiag": "",
[2025-10-14 02:49:36]  *** Listing of results directory ***
[2025-10-14 02:49:36] total 407104
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:47 queuedata.json
[2025-10-14 02:49:36] -rwx------. 1 boinc boinc     36292 Oct 13 00:47 runpilot2-wrapper.sh
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc       100 Oct 13 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 02:49:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 22:50 run_atlas
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc       105 Oct 13 22:50 job.xml
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc 220910684 Oct 13 22:50 EVNT.46676267._004630.pool.root.1
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc      6390 Oct 13 22:50 init_data.xml
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:50 start_atlas.sh
[2025-10-14 02:49:36] drwxrwx--x. 2 boinc boinc        68 Oct 13 22:50 shared
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:50 input.tar.gz
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc         0 Oct 13 22:50 boinc_lockfile
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc      2550 Oct 13 22:50 pandaJob.out
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc    972799 Oct 13 22:53 agis_schedconf.cvmfs.json
[2025-10-14 02:49:36] drwx------. 5 boinc boinc      4096 Oct 13 22:54 pilot3
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc 187377864 Oct 14 02:45 HITS.46676269._091477.pool.root.1
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc       531 Oct 14 02:46 boinc_task_state.xml
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc      1014 Oct 14 02:46 memory_monitor_summary.json
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc   1560580 Oct 14 02:46 agis_ddmendpoints.agis.ALL.json
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc    463198 Oct 14 02:46 log.46676269._091477.job.log.tgz.1
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc        95 Oct 14 02:48 pilot_heartbeat.json
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc      7781 Oct 14 02:48 heartbeat.json
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc      8192 Oct 14 02:49 boinc_mmap_file
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc        28 Oct 14 02:49 wrapper_checkpoint.txt
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc      4885 Oct 14 02:49 pilotlog.txt
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc   1884590 Oct 14 02:49 log.46676269._091477.job.log.1
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc       357 Oct 14 02:49 output.list
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc       620 Oct 14 02:49 runtime_log
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc   2365440 Oct 14 02:49 result.tar.gz
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc       656 Oct 14 02:49 Y0ZMDmw1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkvlNDmcGyF9n.diag
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc      8717 Oct 14 02:49 runtime_log.err
[2025-10-14 02:49:36] -rw-r--r--. 1 boinc boinc     20730 Oct 14 02:49 stderr.txt
[2025-10-14 02:49:36] HITS file was successfully produced:
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc 187377864 Oct 14 02:45 shared/HITS.pool.root.1
[2025-10-14 02:49:36]  *** Contents of shared directory: ***
[2025-10-14 02:49:36] total 401612
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc 220910684 Oct 13 22:50 ATLAS.root_0
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:50 start_atlas.sh
[2025-10-14 02:49:36] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:50 input.tar.gz
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc 187377864 Oct 14 02:45 HITS.pool.root.1
[2025-10-14 02:49:36] -rw-------. 1 boinc boinc   2365440 Oct 14 02:49 result.tar.gz
02:49:38 (12615): run_atlas exited; CPU time 50918.309322
02:49:38 (12615): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN