Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:41:31 (2813604): wrapper (7.7.26015): starting
07:41:31 (2813604): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 07:41:31] Arguments: --nthreads 6
[2025-10-14 07:41:31] Threads: 6
[2025-10-14 07:41:31] Checking for CVMFS
[2025-10-14 07:41:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 07:41:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 07:41:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 07:41:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 07:41:31] 2.11.5.0 2717720 140 57492 151676 0 57 42963396 52428801 28 130560 0 301394 99.988 9463 24 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-14 07:41:31] CVMFS is ok
[2025-10-14 07:41:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 07:41:31] Checking for apptainer binary...
[2025-10-14 07:41:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 07:41:31] Running /usr/bin/apptainer --version
[2025-10-14 07:41:31] apptainer version 1.3.6-1.el9
[2025-10-14 07:41:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 07:41:31] testio002
[2025-10-14 07:41:31] apptainer works
[2025-10-14 07:41:31] Set ATHENA_PROC_NUMBER=6
[2025-10-14 07:41:31] Set ATHENA_CORE_NUMBER=6
[2025-10-14 07:41:31] Starting ATLAS job with PandaID=6841068974
[2025-10-14 07:41:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 08:38:50]  *** The last 200 lines of the pilot log: ***
[2025-10-14 08:38:50] 2025-10-13 23:37:55,116 | INFO     | monitor loop #257: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:37:55,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:37:56,989 | INFO     | time since job start (3378s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:37:56,989 | INFO     | 3383s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-14 08:38:50] 2025-10-13 23:37:57,619 | INFO     | monitor loop #258: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:37:57,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:37:58,994 | INFO     | time since job start (3380s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:00,122 | INFO     | monitor loop #259: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:00,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:00,999 | INFO     | time since job start (3382s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:02,039 | INFO     | PID=2819736 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 08:38:50] 2025-10-13 23:38:02,039 | INFO     | .. there are 2 such processes running
[2025-10-14 08:38:50] 2025-10-13 23:38:02,625 | INFO     | monitor loop #260: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:02,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:03,040 | INFO     | time since job start (3385s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:05,044 | INFO     | time since job start (3387s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:05,128 | INFO     | monitor loop #261: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:05,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:07,049 | INFO     | time since job start (3389s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:07,631 | INFO     | monitor loop #262: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:07,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:09,054 | INFO     | time since job start (3391s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:10,133 | INFO     | monitor loop #263: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:10,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:11,055 | INFO     | time since job start (3393s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:12,636 | INFO     | monitor loop #264: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:12,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:13,060 | INFO     | time since job start (3395s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:15,065 | INFO     | time since job start (3397s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:15,139 | INFO     | monitor loop #265: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:15,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:17,070 | INFO     | time since job start (3399s) is within the limit (172800.0s)
[2025-10-14 08:38:50] 2025-10-13 23:38:17,642 | INFO     | monitor loop #266: job 0:6841068974 is in state 'finished'
[2025-10-14 08:38:50] 2025-10-13 23:38:17,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,101 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 08:38:50] 2025-10-13 23:38:18,102 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4399.3370625
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6841068974/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | INFO     | extracted standard info from prmon json
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 08:38:50] 2025-10-13 23:38:18,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | fitting pss+swap vs Time
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | sum of square deviations: 34277852.0
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | sum of deviations: -3040421505.5
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | mean x: 1760397051.5
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | mean y: 2535459.8125
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | -- intersect: 156148523067.18622
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | intersect: 156148523067.18622
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | chi2: 0.022589252394416722
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | -- intersect: 156148523067.18622
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | current memory leak: -88.70 B/s (using 48 data points, chi2=0.02)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | could have reported an average CPU frequency of 4379 MHz (5 samples)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | ..............................
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . Timing measurements:
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . get job = 0 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . initial setup = 4 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . payload setup = 1 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . stage-in = 0 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . payload execution = 3344 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . stage-out = 0 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | . log creation = 0 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,104 | INFO     | ..............................
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | 
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | job summary report
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | --------------------------------------------------
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | PanDA job id: 6841068974
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | task id: 46676269
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | errors: (none)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | pilot state: finished 
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | transexitcode: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | exeerrorcode: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | exeerrordiag: 
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | exitcode: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | exitmsg: OK
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | cpuconsumptiontime: 18153 s
[2025-10-14 08:38:50] 2025-10-13 23:38:18,130 | INFO     | nevents: 400
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | neventsw: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | pid: 2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | pgrp: 2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | corecount: 6
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | event service: False
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | sizes: {0: 2348857, 1: 2349119, 11: 2349147, 3349: 2374787, 3350: 2383785, 3353: 2383841, 3388: 2384195}
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | --------------------------------------------------
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | 
[2025-10-14 08:38:50] 2025-10-13 23:38:18,131 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | job 6841068974 has completed (purged errors)
[2025-10-14 08:38:50] 2025-10-13 23:38:18,138 | INFO     | overall cleanup function is called
[2025-10-14 08:38:50] 2025-10-13 23:38:19,144 | INFO     | --- collectZombieJob: --- 10, [2833365]
[2025-10-14 08:38:50] 2025-10-13 23:38:19,144 | INFO     | zombie collector waiting for pid 2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:19,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 08:38:50] 2025-10-13 23:38:19,145 | INFO     | collected zombie processes
[2025-10-14 08:38:50] 2025-10-13 23:38:19,145 | INFO     | will attempt to kill all subprocesses of pid=2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:19,177 | INFO     | process IDs to be killed: [2833365] (in reverse order)
[2025-10-14 08:38:50] 2025-10-13 23:38:19,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 08:38:50] 2025-10-13 23:38:19,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 08:38:50] 2025-10-13 23:38:19,191 | INFO     | did not find any defunct processes belonging to 2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:19,192 | INFO     | did not find any defunct processes belonging to 2833365
[2025-10-14 08:38:50] 2025-10-13 23:38:19,192 | INFO     | ready for new job
[2025-10-14 08:38:50] 2025-10-13 23:38:19,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 08:38:50] 2025-10-13 23:38:19,192 | INFO     | ***************************************
[2025-10-14 08:38:50] 2025-10-13 23:38:19,193 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 08:38:50] 2025-10-13 23:38:19,193 | INFO     | ***************************************
[2025-10-14 08:38:50] 2025-10-13 23:38:19,193 | INFO     | 
[2025-10-14 08:38:50] 2025-10-13 23:38:19,193 | INFO     | architecture information:
[2025-10-14 08:38:50] 2025-10-13 23:38:19,193 | INFO     | executing command: cat /etc/os-release
[2025-10-14 08:38:50] 2025-10-13 23:38:19,197 | INFO     | cat /etc/os-release:
[2025-10-14 08:38:50] NAME="CentOS Linux"
[2025-10-14 08:38:50] VERSION="7 (Core)"
[2025-10-14 08:38:50] ID="centos"
[2025-10-14 08:38:50] ID_LIKE="rhel fedora"
[2025-10-14 08:38:50] VERSION_ID="7"
[2025-10-14 08:38:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 08:38:50] ANSI_COLOR="0;31"
[2025-10-14 08:38:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 08:38:50] HOME_URL="https://www.centos.org/"
[2025-10-14 08:38:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 08:38:50] 
[2025-10-14 08:38:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 08:38:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 08:38:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 08:38:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 08:38:50] 
[2025-10-14 08:38:50] 2025-10-13 23:38:19,197 | INFO     | ***************************************
[2025-10-14 08:38:50] 2025-10-13 23:38:19,700 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | INFO     | sufficient remaining disk space (303029026816 B)
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | INFO     | update_server=False
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 08:38:50] 2025-10-13 23:38:19,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:38:50] 2025-10-13 23:38:19,756 | INFO     | all job control threads have been joined
[2025-10-14 08:38:50] 2025-10-13 23:38:20,145 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 08:38:50] 2025-10-13 23:38:20,145 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 08:38:50] 2025-10-13 23:38:20,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:38:50] 2025-10-13 23:38:20,146 | INFO     | will abort loop
[2025-10-14 08:38:50] 2025-10-13 23:38:20,346 | INFO     | all data control threads have been joined
[2025-10-14 08:38:50] 2025-10-13 23:38:20,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 08:38:50] 2025-10-13 23:38:20,723 | INFO     | [job] retrieve thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:20,723 | INFO     | [job] queue monitor thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:20,762 | INFO     | [job] control thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:20,862 | INFO     | all payload control threads have been joined
[2025-10-14 08:38:50] 2025-10-13 23:38:21,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 08:38:50] 2025-10-13 23:38:21,129 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,150 | INFO     | [job] job monitor thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,351 | INFO     | [data] control thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,731 | INFO     | [data] copytool_in thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,779 | INFO     | [payload] failed_post thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,863 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,867 | INFO     | [payload] control thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:21,892 | INFO     | [job] validate thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:22,001 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:22,290 | INFO     | [payload] validate_post thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:22,573 | INFO     | [data] copytool_out thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:25,063 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:30,611 | INFO     | job.realtimelogging is not enabled
[2025-10-14 08:38:50] 2025-10-13 23:38:31,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 08:38:50] 2025-10-13 23:38:43,220 | INFO     | [monitor] cgroup control has ended
[2025-10-14 08:38:50] 2025-10-13 23:38:44,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786878347072)>', '<ExcThread(monitor, started 139786371176192)>']
[2025-10-14 08:38:50] 2025-10-13 23:38:49,512 | INFO     | all workflow threads have been joined
[2025-10-14 08:38:50] 2025-10-13 23:38:49,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 08:38:50] 2025-10-13 23:38:49,512 | INFO     | traces error code: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:49,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 08:38:50] 2025-10-13 23:38:50,197 | INFO     | PID=2819736 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 08:38:50] 2025-10-13 23:38:50,197 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 08:38:50] 2025-10-13 23:38:50,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 08:38:50] 2025-10-13 23:38:50,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 08:38:50] 2025-10-13 23:38:50,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 08:38:50] 2025-10-13 23:38:50,198 | INFO     | [monitor] control thread has ended
[2025-10-14 08:38:50] 2025-10-13 23:38:50,232 [wrapper] ==== pilot stdout END ====
[2025-10-14 08:38:50] 2025-10-13 23:38:50,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 08:38:50] 2025-10-13 23:38:50,234 [wrapper] pilotpid: 2819736
[2025-10-14 08:38:50] 2025-10-13 23:38:50,234 [wrapper] Pilot exit status: 0
[2025-10-14 08:38:50] 2025-10-13 23:38:50,236 [wrapper] pandaids: 6841068974
[2025-10-14 08:38:50] 2025-10-13 23:38:50,243 [wrapper] cleanup supervisor_pilot 2851667 2819737
[2025-10-14 08:38:50] 2025-10-13 23:38:50,244 [wrapper] Test setup, not cleaning
[2025-10-14 08:38:50] 2025-10-13 23:38:50,244 [wrapper] apfmon messages muted
[2025-10-14 08:38:50] 2025-10-13 23:38:50,245 [wrapper] ==== wrapper stdout END ====
[2025-10-14 08:38:50] 2025-10-13 23:38:50,246 [wrapper] ==== wrapper stderr END ====
[2025-10-14 08:38:50]  *** Error codes and diagnostics ***
[2025-10-14 08:38:50]     "exeErrorCode": 0,
[2025-10-14 08:38:50]     "exeErrorDiag": "",
[2025-10-14 08:38:50]     "pilotErrorCode": 0,
[2025-10-14 08:38:50]     "pilotErrorDiag": "",
[2025-10-14 08:38:50]  *** Listing of results directory ***
[2025-10-14 08:38:50] total 409320
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc    557409 Oct 13 09:11 pilot3.tar.gz
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc      5112 Oct 13 09:33 queuedata.json
[2025-10-14 08:38:50] -rwx------. 1 boinc boinc     36292 Oct 13 09:33 runpilot2-wrapper.sh
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc       100 Oct 14 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 08:38:50] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 07:41 run_atlas
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc       105 Oct 14 07:41 job.xml
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc     15120 Oct 14 07:41 start_atlas.sh
[2025-10-14 08:38:50] drwxrwx--x. 2 boinc boinc        68 Oct 14 07:41 shared
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc    569677 Oct 14 07:41 input.tar.gz
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc      9628 Oct 14 07:41 init_data.xml
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc 218419622 Oct 14 07:41 EVNT.46676267._004694.pool.root.1
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc         0 Oct 14 07:41 boinc_lockfile
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc      2550 Oct 14 07:41 pandaJob.out
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc    972799 Oct 14 07:41 agis_schedconf.cvmfs.json
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc   1560580 Oct 14 07:41 agis_ddmendpoints.agis.ALL.json
[2025-10-14 08:38:50] drwx------. 5 boinc boinc      4096 Oct 14 07:41 pilot3
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc 195259539 Oct 14 08:37 HITS.46676269._093183.pool.root.1
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc      1026 Oct 14 08:37 memory_monitor_summary.json
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc    268809 Oct 14 08:37 log.46676269._093183.job.log.tgz.1
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc       529 Oct 14 08:37 boinc_task_state.xml
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc        95 Oct 14 08:37 pilot_heartbeat.json
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc      7796 Oct 14 08:38 heartbeat.json
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc        27 Oct 14 08:38 wrapper_checkpoint.txt
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc      8192 Oct 14 08:38 boinc_mmap_file
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc       747 Oct 14 08:38 pilotlog.txt
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc    519042 Oct 14 08:38 log.46676269._093183.job.log.1
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc       357 Oct 14 08:38 output.list
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc       620 Oct 14 08:38 runtime_log
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc    808960 Oct 14 08:38 result.tar.gz
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc      8661 Oct 14 08:38 runtime_log.err
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc       642 Oct 14 08:38 HZPODmzfLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRCmNDmG1Chcn.diag
[2025-10-14 08:38:50] -rw-r--r--. 1 boinc boinc     21952 Oct 14 08:38 stderr.txt
[2025-10-14 08:38:50] HITS file was successfully produced:
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc 195259539 Oct 14 08:37 shared/HITS.pool.root.1
[2025-10-14 08:38:50]  *** Contents of shared directory: ***
[2025-10-14 08:38:50] total 405356
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc     15120 Oct 14 07:41 start_atlas.sh
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc    569677 Oct 14 07:41 input.tar.gz
[2025-10-14 08:38:50] -rw-r--r--. 2 boinc boinc 218419622 Oct 14 07:41 ATLAS.root_0
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc 195259539 Oct 14 08:37 HITS.pool.root.1
[2025-10-14 08:38:50] -rw-------. 1 boinc boinc    808960 Oct 14 08:38 result.tar.gz
08:38:51 (2813604): run_atlas exited; CPU time 18171.415911
08:38:51 (2813604): called boinc_finish(0)

</stderr_txt>
]]>

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