Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:26 (3255187): wrapper (7.7.26015): starting
04:18:26 (3255187): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 04:18:26] Arguments: --nthreads 9
[2025-10-13 04:18:26] Threads: 9
[2025-10-13 04:18:26] Checking for CVMFS
[2025-10-13 04:18:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:18:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:18:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:18:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:18:27] 2.13.2.0 11275 65601 287280 151654 3 61 24998074 32935937 6001 16776704 10 135410154 99.640 123836792 8570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:18:27] CVMFS is ok
[2025-10-13 04:18:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:18:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:18:27] Further information can be found at the LHC@home message board.
[2025-10-13 04:18:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:18:27] Checking for apptainer binary...
[2025-10-13 04:18:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:18:27] Running /usr/bin/apptainer --version
[2025-10-13 04:18:27] apptainer version 1.4.3-1.el9
[2025-10-13 04:18:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:18:48] c6-12-25-1.aglt2.org
[2025-10-13 04:18:48] apptainer works
[2025-10-13 04:18:48] Set ATHENA_PROC_NUMBER=9
[2025-10-13 04:18:48] Set ATHENA_CORE_NUMBER=9
[2025-10-13 04:18:48] Starting ATLAS job with PandaID=6841851701
[2025-10-13 04:18:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:16:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:16:26] 2025-10-13 11:15:34,804 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:16:26] 2025-10-13 11:15:34,805 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,808 | INFO     | sum of deviations: 14056977616.000048
[2025-10-13 07:16:26] 2025-10-13 11:15:34,808 | INFO     | mean x: 1760348828.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,808 | INFO     | mean y: 2134798.6878612717
[2025-10-13 07:16:26] 2025-10-13 11:15:34,808 | INFO     | -- intersect: -15410910913.419657
[2025-10-13 07:16:26] 2025-10-13 11:15:34,809 | INFO     | intersect: -15410910913.419657
[2025-10-13 07:16:26] 2025-10-13 11:15:34,810 | INFO     | chi2: 3.230001688128303
[2025-10-13 07:16:26] 2025-10-13 11:15:34,810 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,813 | INFO     | sum of deviations: 28186866244.499996
[2025-10-13 07:16:26] 2025-10-13 11:15:34,813 | INFO     | mean x: 1760348675.5
[2025-10-13 07:16:26] 2025-10-13 11:15:34,814 | INFO     | mean y: 2150505.3154761903
[2025-10-13 07:16:26] 2025-10-13 11:15:34,814 | INFO     | -- intersect: -33746360081.969147
[2025-10-13 07:16:26] 2025-10-13 11:15:34,814 | INFO     | intersect: -33746360081.969147
[2025-10-13 07:16:26] 2025-10-13 11:15:34,815 | INFO     | chi2: 2.499287801881271
[2025-10-13 07:16:26] 2025-10-13 11:15:34,815 | INFO     | current chi2=2.499287801881271 (change=22.622709112900203 %)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,815 | INFO     | right removable region: 167
[2025-10-13 07:16:26] 2025-10-13 11:15:34,816 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,819 | INFO     | sum of deviations: -17696391061.5
[2025-10-13 07:16:26] 2025-10-13 11:15:34,819 | INFO     | mean x: 1760348980.5
[2025-10-13 07:16:26] 2025-10-13 11:15:34,819 | INFO     | mean y: 2170411.4345238097
[2025-10-13 07:16:26] 2025-10-13 11:15:34,820 | INFO     | -- intersect: 21190298931.69859
[2025-10-13 07:16:26] 2025-10-13 11:15:34,820 | INFO     | intersect: 21190298931.69859
[2025-10-13 07:16:26] 2025-10-13 11:15:34,821 | INFO     | chi2: 1.2408906502247499
[2025-10-13 07:16:26] 2025-10-13 11:15:34,821 | INFO     | current chi2=1.2408906502247499 (change=61.582352888991466 %)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,822 | INFO     | sum of square deviations: 1342841922.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,824 | INFO     | sum of deviations: -31038381241.999992
[2025-10-13 07:16:26] 2025-10-13 11:15:34,824 | INFO     | mean x: 1760349133.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,825 | INFO     | mean y: 2186257.8834355827
[2025-10-13 07:16:26] 2025-10-13 11:15:34,825 | INFO     | -- intersect: 40690808361.44489
[2025-10-13 07:16:26] 2025-10-13 11:15:34,825 | INFO     | intersect: 40690808361.44489
[2025-10-13 07:16:26] 2025-10-13 11:15:34,826 | INFO     | chi2: 0.8167789859339155
[2025-10-13 07:16:26] 2025-10-13 11:15:34,826 | INFO     | current chi2=0.8167789859339155 (change=34.17800466253971 %)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,827 | INFO     | sum of square deviations: 1223016419.5
[2025-10-13 07:16:26] 2025-10-13 11:15:34,829 | INFO     | sum of deviations: -29550467259.499996
[2025-10-13 07:16:26] 2025-10-13 11:15:34,830 | INFO     | mean x: 1760349285.5
[2025-10-13 07:16:26] 2025-10-13 11:15:34,830 | INFO     | mean y: 2184353.6265822784
[2025-10-13 07:16:26] 2025-10-13 11:15:34,830 | INFO     | -- intersect: 42535663951.32381
[2025-10-13 07:16:26] 2025-10-13 11:15:34,830 | INFO     | intersect: 42535663951.32381
[2025-10-13 07:16:26] 2025-10-13 11:15:34,831 | INFO     | chi2: 0.8149612511351767
[2025-10-13 07:16:26] 2025-10-13 11:15:34,831 | INFO     | current chi2=0.8149612511351767 (change=0.22254916324278246 %)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,831 | INFO     | left removable region: 30
[2025-10-13 07:16:26] 2025-10-13 11:15:34,832 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,834 | INFO     | sum of deviations: -10176967635.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,834 | INFO     | mean x: 1760349560.0
[2025-10-13 07:16:26] 2025-10-13 11:15:34,835 | INFO     | mean y: 2197413.5255474453
[2025-10-13 07:16:26] 2025-10-13 11:15:34,835 | INFO     | -- intersect: 22472055188.51475
[2025-10-13 07:16:26] 2025-10-13 11:15:34,835 | INFO     | intersect: 22472055188.51475
[2025-10-13 07:16:26] 2025-10-13 11:15:34,836 | INFO     | chi2: 0.07267072146036875
[2025-10-13 07:16:26] 2025-10-13 11:15:34,836 | INFO     | -- intersect: 22472055188.51475
[2025-10-13 07:16:26] 2025-10-13 11:15:34,836 | INFO     | current memory leak: -12.76 B/s (using 137 data points, chi2=0.07)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,837 | INFO     | could have reported an average CPU frequency of 2097 MHz (9 samples)
[2025-10-13 07:16:26] 2025-10-13 11:15:34,838 | INFO     | ..............................
[2025-10-13 07:16:26] 2025-10-13 11:15:34,838 | INFO     | . Timing measurements:
[2025-10-13 07:16:26] 2025-10-13 11:15:34,838 | INFO     | . get job = 0 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,838 | INFO     | . initial setup = 3 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | . payload setup = 8 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | . stage-in = 0 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | . payload execution = 10544 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | . stage-out = 1 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | . log creation = 0 s
[2025-10-13 07:16:26] 2025-10-13 11:15:34,839 | INFO     | ..............................
[2025-10-13 07:16:26] 2025-10-13 11:15:35,313 | INFO     | 
[2025-10-13 07:16:26] 2025-10-13 11:15:35,314 | INFO     | job summary report
[2025-10-13 07:16:26] 2025-10-13 11:15:35,314 | INFO     | --------------------------------------------------
[2025-10-13 07:16:26] 2025-10-13 11:15:35,314 | INFO     | PanDA job id: 6841851701
[2025-10-13 07:16:26] 2025-10-13 11:15:35,315 | INFO     | task id: 46676269
[2025-10-13 07:16:26] 2025-10-13 11:15:35,315 | INFO     | errors: (none)
[2025-10-13 07:16:26] 2025-10-13 11:15:35,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:16:26] 2025-10-13 11:15:35,315 | INFO     | pilot state: finished 
[2025-10-13 07:16:26] 2025-10-13 11:15:35,315 | INFO     | transexitcode: 0
[2025-10-13 07:16:26] 2025-10-13 11:15:35,316 | INFO     | exeerrorcode: 0
[2025-10-13 07:16:26] 2025-10-13 11:15:35,316 | INFO     | exeerrordiag: 
[2025-10-13 07:16:26] 2025-10-13 11:15:35,316 | INFO     | exitcode: 0
[2025-10-13 07:16:26] 2025-10-13 11:15:35,316 | INFO     | exitmsg: OK
[2025-10-13 07:16:26] 2025-10-13 11:15:35,316 | INFO     | cpuconsumptiontime: 86607 s
[2025-10-13 07:16:26] 2025-10-13 11:15:35,317 | INFO     | nevents: 400
[2025-10-13 07:16:26] 2025-10-13 11:15:35,317 | INFO     | neventsw: 0
[2025-10-13 07:16:26] 2025-10-13 11:15:35,317 | INFO     | pid: 3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:35,317 | INFO     | pgrp: 3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:35,317 | INFO     | corecount: 9
[2025-10-13 07:16:26] 2025-10-13 11:15:35,318 | INFO     | event service: False
[2025-10-13 07:16:26] 2025-10-13 11:15:35,318 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 8: 2349175, 12: 2349203, 10557: 2378533, 10559: 2387531, 10562: 2387587, 10569: 2387845}
[2025-10-13 07:16:26] 2025-10-13 11:15:35,318 | INFO     | --------------------------------------------------
[2025-10-13 07:16:26] 2025-10-13 11:15:35,318 | INFO     | 
[2025-10-13 07:16:26] 2025-10-13 11:15:35,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:16:26] 2025-10-13 11:15:35,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:16:26] 2025-10-13 11:15:35,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:16:26] 2025-10-13 11:15:35,350 | INFO     | job 6841851701 has completed (purged errors)
[2025-10-13 07:16:26] 2025-10-13 11:15:35,350 | INFO     | overall cleanup function is called
[2025-10-13 07:16:26] 2025-10-13 11:15:36,361 | INFO     | --- collectZombieJob: --- 10, [3267067]
[2025-10-13 07:16:26] 2025-10-13 11:15:36,361 | INFO     | zombie collector waiting for pid 3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:36,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:16:26] 2025-10-13 11:15:36,362 | INFO     | collected zombie processes
[2025-10-13 07:16:26] 2025-10-13 11:15:36,362 | INFO     | will attempt to kill all subprocesses of pid=3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:36,887 | INFO     | process IDs to be killed: [3267067] (in reverse order)
[2025-10-13 07:16:26] 2025-10-13 11:15:37,006 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:16:26] 2025-10-13 11:15:37,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:16:26] 2025-10-13 11:15:37,021 | INFO     | did not find any defunct processes belonging to 3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:37,035 | INFO     | did not find any defunct processes belonging to 3267067
[2025-10-13 07:16:26] 2025-10-13 11:15:37,036 | INFO     | ready for new job
[2025-10-13 07:16:26] 2025-10-13 11:15:37,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:16:26] 2025-10-13 11:15:37,038 | INFO     | ***************************************
[2025-10-13 07:16:26] 2025-10-13 11:15:37,039 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:16:26] 2025-10-13 11:15:37,039 | INFO     | ***************************************
[2025-10-13 07:16:26] 2025-10-13 11:15:37,039 | INFO     | 
[2025-10-13 07:16:26] 2025-10-13 11:15:37,059 | INFO     | architecture information:
[2025-10-13 07:16:26] 2025-10-13 11:15:37,060 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:16:26] 2025-10-13 11:15:37,077 | INFO     | cat /etc/os-release:
[2025-10-13 07:16:26] NAME="CentOS Linux"
[2025-10-13 07:16:26] VERSION="7 (Core)"
[2025-10-13 07:16:26] ID="centos"
[2025-10-13 07:16:26] ID_LIKE="rhel fedora"
[2025-10-13 07:16:26] VERSION_ID="7"
[2025-10-13 07:16:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:16:26] ANSI_COLOR="0;31"
[2025-10-13 07:16:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:16:26] HOME_URL="https://www.centos.org/"
[2025-10-13 07:16:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:16:26] 
[2025-10-13 07:16:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:16:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:16:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:16:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:16:26] 
[2025-10-13 07:16:26] 2025-10-13 11:15:37,077 | INFO     | ***************************************
[2025-10-13 07:16:26] 2025-10-13 11:15:37,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:16:26] 2025-10-13 11:15:37,599 | INFO     | sufficient remaining disk space (73010249728 B)
[2025-10-13 07:16:26] 2025-10-13 11:15:37,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:16:26] 2025-10-13 11:15:37,600 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:16:26] 2025-10-13 11:15:37,600 | INFO     | update_server=False
[2025-10-13 07:16:26] 2025-10-13 11:15:37,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:16:26] 2025-10-13 11:15:37,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:16:26] 2025-10-13 11:15:37,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:16:26] 2025-10-13 11:15:37,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:16:26] 2025-10-13 11:15:37,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:16:26] 2025-10-13 11:15:37,615 | INFO     | will abort loop
[2025-10-13 07:16:26] 2025-10-13 11:15:37,902 | INFO     | all data control threads have been joined
[2025-10-13 07:16:26] 2025-10-13 11:15:38,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:16:26] 2025-10-13 11:15:38,605 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:38,616 | INFO     | all job control threads have been joined
[2025-10-13 07:16:26] 2025-10-13 11:15:38,620 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:38,671 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:38,673 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:38,829 | INFO     | all payload control threads have been joined
[2025-10-13 07:16:26] 2025-10-13 11:15:38,908 | INFO     | [data] control thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,027 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,303 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,606 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,622 | INFO     | [job] control thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,670 | INFO     | [job] validate thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,834 | INFO     | [payload] control thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:39,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:16:26] 2025-10-13 11:15:40,189 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:40,189 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:41,002 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:42,162 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:15:48,370 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:16:26] 2025-10-13 11:15:49,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:16:26] 2025-10-13 11:16:07,687 | INFO     | PID=3259003 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:16:26] 2025-10-13 11:16:07,687 | INFO     | .. there are 5 such processes running
[2025-10-13 07:16:26] 2025-10-13 11:16:07,688 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:16:26] 2025-10-13 11:16:07,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:16:26] 2025-10-13 11:16:07,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:16:26] 2025-10-13 11:16:20,712 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:16:26] 2025-10-13 11:16:21,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757984958272)>', '<ExcThread(monitor, started 139757346608896)>']
[2025-10-13 07:16:26] 2025-10-13 11:16:21,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:16:26] 2025-10-13 11:16:21,759 | INFO     | [monitor] control thread has ended
[2025-10-13 07:16:26] 2025-10-13 11:16:26,033 | INFO     | all workflow threads have been joined
[2025-10-13 07:16:26] 2025-10-13 11:16:26,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:16:26] 2025-10-13 11:16:26,034 | INFO     | traces error code: 0
[2025-10-13 07:16:26] 2025-10-13 11:16:26,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:16:26] 2025-10-13 11:16:26,248 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:16:26] 2025-10-13 11:16:26,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:16:26] 2025-10-13 11:16:26,256 [wrapper] pilotpid: 3259003
[2025-10-13 07:16:26] 2025-10-13 11:16:26,260 [wrapper] Pilot exit status: 0
[2025-10-13 07:16:26] 2025-10-13 11:16:26,275 [wrapper] pandaids: 6841851701
[2025-10-13 07:16:26] 2025-10-13 11:16:26,368 [wrapper] cleanup supervisor_pilot 3655621 3259004
[2025-10-13 07:16:26] 2025-10-13 11:16:26,372 [wrapper] Test setup, not cleaning
[2025-10-13 07:16:26] 2025-10-13 11:16:26,376 [wrapper] apfmon messages muted
[2025-10-13 07:16:26] 2025-10-13 11:16:26,380 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:16:26] 2025-10-13 11:16:26,384 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:16:26]  *** Error codes and diagnostics ***
[2025-10-13 07:16:26]     "exeErrorCode": 0,
[2025-10-13 07:16:26]     "exeErrorDiag": "",
[2025-10-13 07:16:26]     "pilotErrorCode": 0,
[2025-10-13 07:16:26]     "pilotErrorDiag": "",
[2025-10-13 07:16:26]  *** Listing of results directory ***
[2025-10-13 07:16:26] total 405088
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:02 pilot3.tar.gz
[2025-10-13 07:16:26] -rwx------. 1 boincer umatlas     36292 Oct 12 23:10 runpilot2-wrapper.sh
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:10 queuedata.json
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:16:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:18 run_atlas
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:18 job.xml
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas 221528574 Oct 13 04:18 EVNT.46676267._001193.pool.root.1
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 04:18 input.tar.gz
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 07:16:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:18 shared
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:18 boinc_lockfile
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:18 pandaJob.out
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas    972857 Oct 13 04:19 agis_schedconf.cvmfs.json
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:16:26] drwx------. 5 boincer umatlas      4096 Oct 13 04:19 pilot3
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 07:12 init_data.xml
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:14 boinc_task_state.xml
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas 185628122 Oct 13 07:14 HITS.46676269._095543.pool.root.1
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas      1036 Oct 13 07:15 memory_monitor_summary.json
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas    422391 Oct 13 07:15 log.46676269._095543.job.log.tgz.1
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas      7830 Oct 13 07:15 heartbeat.json
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas        95 Oct 13 07:16 pilot_heartbeat.json
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:16 boinc_mmap_file
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:16 wrapper_checkpoint.txt
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas      5081 Oct 13 07:16 pilotlog.txt
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas   1448757 Oct 13 07:16 log.46676269._095543.job.log.1
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas       357 Oct 13 07:16 output.list
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:16 runtime_log
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas   1894400 Oct 13 07:16 result.tar.gz
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 07:16 runtime_log.err
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas       656 Oct 13 07:16 PuwNDm37NS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7amNDmYfdrQo.diag
[2025-10-13 07:16:26] -rw-r--r--. 1 boincer umatlas     20947 Oct 13 07:16 stderr.txt
[2025-10-13 07:16:26] HITS file was successfully produced:
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas 185628122 Oct 13 07:14 shared/HITS.pool.root.1
[2025-10-13 07:16:26]  *** Contents of shared directory: ***
[2025-10-13 07:16:26] total 400056
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas 221528574 Oct 13 04:18 ATLAS.root_0
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 04:18 input.tar.gz
[2025-10-13 07:16:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas 185628122 Oct 13 07:14 HITS.pool.root.1
[2025-10-13 07:16:26] -rw-------. 1 boincer umatlas   1894400 Oct 13 07:16 result.tar.gz
07:16:28 (3255187): run_atlas exited; CPU time 87611.893108
07:16:28 (3255187): called boinc_finish(0)

</stderr_txt>
]]>

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