Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:08:35 (3188326): wrapper (7.7.26015): starting
04:08:35 (3188326): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 04:08:35] Arguments: --nthreads 9
[2025-10-13 04:08:35] Threads: 9
[2025-10-13 04:08:35] Checking for CVMFS
[2025-10-13 04:08:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:08:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:08:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:08:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:08:36] 2.13.2.0 11275 65591 283588 151653 1 188 24995175 32935937 5449 16776704 10 135248111 99.640 123835497 8570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:08:36] CVMFS is ok
[2025-10-13 04:08:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:08:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:08:36] Further information can be found at the LHC@home message board.
[2025-10-13 04:08:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:08:36] Checking for apptainer binary...
[2025-10-13 04:08:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:08:36] Running /usr/bin/apptainer --version
[2025-10-13 04:08:36] apptainer version 1.4.3-1.el9
[2025-10-13 04:08:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:08:36] c6-12-25-1.aglt2.org
[2025-10-13 04:08:36] apptainer works
[2025-10-13 04:08:36] Set ATHENA_PROC_NUMBER=9
[2025-10-13 04:08:36] Set ATHENA_CORE_NUMBER=9
[2025-10-13 04:08:36] Starting ATLAS job with PandaID=6842269295
[2025-10-13 04:08:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:03:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:03:12] 2025-10-13 11:02:23,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:03:12] 2025-10-13 11:02:23,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:03:12] 2025-10-13 11:02:23,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:03:12] 2025-10-13 11:02:23,805 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:03:12] 2025-10-13 11:02:23,806 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 07:03:12] 2025-10-13 11:02:23,809 | INFO     | sum of deviations: 25438272460.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,810 | INFO     | mean x: 1760348119.5
[2025-10-13 07:03:12] 2025-10-13 11:02:23,810 | INFO     | mean y: 2148653.788235294
[2025-10-13 07:03:12] 2025-10-13 11:02:23,810 | INFO     | -- intersect: -29393023967.058273
[2025-10-13 07:03:12] 2025-10-13 11:02:23,810 | INFO     | intersect: -29393023967.058273
[2025-10-13 07:03:12] 2025-10-13 11:02:23,811 | INFO     | chi2: 3.040222519478735
[2025-10-13 07:03:12] 2025-10-13 11:02:23,812 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,815 | INFO     | sum of deviations: 35647038785.00001
[2025-10-13 07:03:12] 2025-10-13 11:02:23,815 | INFO     | mean x: 1760347967.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,816 | INFO     | mean y: 2160309.672727273
[2025-10-13 07:03:12] 2025-10-13 11:02:23,816 | INFO     | -- intersect: -45049175990.41476
[2025-10-13 07:03:12] 2025-10-13 11:02:23,816 | INFO     | intersect: -45049175990.41476
[2025-10-13 07:03:12] 2025-10-13 11:02:23,817 | INFO     | chi2: 2.166819564533506
[2025-10-13 07:03:12] 2025-10-13 11:02:23,817 | INFO     | current chi2=2.166819564533506 (change=28.72825753211576 %)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,818 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,820 | INFO     | sum of deviations: 35898193566.49999
[2025-10-13 07:03:12] 2025-10-13 11:02:23,821 | INFO     | mean x: 1760347814.5
[2025-10-13 07:03:12] 2025-10-13 11:02:23,821 | INFO     | mean y: 2160625.91875
[2025-10-13 07:03:12] 2025-10-13 11:02:23,821 | INFO     | -- intersect: -49754322196.1243
[2025-10-13 07:03:12] 2025-10-13 11:02:23,821 | INFO     | intersect: -49754322196.1243
[2025-10-13 07:03:12] 2025-10-13 11:02:23,822 | INFO     | chi2: 2.1576244992847484
[2025-10-13 07:03:12] 2025-10-13 11:02:23,822 | INFO     | current chi2=2.1576244992847484 (change=0.4243576806884322 %)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,823 | INFO     | right removable region: 159
[2025-10-13 07:03:12] 2025-10-13 11:02:23,823 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,826 | INFO     | sum of deviations: -4747870705.999999
[2025-10-13 07:03:12] 2025-10-13 11:02:23,826 | INFO     | mean x: 1760348272.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,826 | INFO     | mean y: 2183696.5575757576
[2025-10-13 07:03:12] 2025-10-13 11:02:23,827 | INFO     | -- intersect: 6002624805.723604
[2025-10-13 07:03:12] 2025-10-13 11:02:23,827 | INFO     | intersect: 6002624805.723604
[2025-10-13 07:03:12] 2025-10-13 11:02:23,827 | INFO     | chi2: 1.2079590499571853
[2025-10-13 07:03:12] 2025-10-13 11:02:23,828 | INFO     | current chi2=1.2079590499571853 (change=60.2674132495967 %)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,828 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,831 | INFO     | sum of deviations: -14524351533.5
[2025-10-13 07:03:12] 2025-10-13 11:02:23,831 | INFO     | mean x: 1760348424.5
[2025-10-13 07:03:12] 2025-10-13 11:02:23,831 | INFO     | mean y: 2195700.88125
[2025-10-13 07:03:12] 2025-10-13 11:02:23,832 | INFO     | -- intersect: 20133595813.375004
[2025-10-13 07:03:12] 2025-10-13 11:02:23,832 | INFO     | intersect: 20133595813.375004
[2025-10-13 07:03:12] 2025-10-13 11:02:23,833 | INFO     | chi2: 0.9582459810323765
[2025-10-13 07:03:12] 2025-10-13 11:02:23,833 | INFO     | current chi2=0.9582459810323765 (change=20.6723124375499 %)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,833 | INFO     | left removable region: 20
[2025-10-13 07:03:12] 2025-10-13 11:02:23,834 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,836 | INFO     | sum of deviations: -3244926476.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,836 | INFO     | mean x: 1760348394.0
[2025-10-13 07:03:12] 2025-10-13 11:02:23,836 | INFO     | mean y: 2213953.143884892
[2025-10-13 07:03:12] 2025-10-13 11:02:23,837 | INFO     | -- intersect: 6861882682.28774
[2025-10-13 07:03:12] 2025-10-13 11:02:23,837 | INFO     | intersect: 6861882682.28774
[2025-10-13 07:03:12] 2025-10-13 11:02:23,837 | INFO     | chi2: 0.04984983309980735
[2025-10-13 07:03:12] 2025-10-13 11:02:23,838 | INFO     | -- intersect: 6861882682.28774
[2025-10-13 07:03:12] 2025-10-13 11:02:23,838 | INFO     | current memory leak: -3.90 B/s (using 139 data points, chi2=0.05)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,839 | INFO     | could have reported an average CPU frequency of 2100 MHz (9 samples)
[2025-10-13 07:03:12] 2025-10-13 11:02:23,840 | INFO     | ..............................
[2025-10-13 07:03:12] 2025-10-13 11:02:23,840 | INFO     | . Timing measurements:
[2025-10-13 07:03:12] 2025-10-13 11:02:23,840 | INFO     | . get job = 0 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,840 | INFO     | . initial setup = 3 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,840 | INFO     | . payload setup = 7 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,841 | INFO     | . stage-in = 0 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,841 | INFO     | . payload execution = 10370 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,841 | INFO     | . stage-out = 1 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,841 | INFO     | . log creation = 0 s
[2025-10-13 07:03:12] 2025-10-13 11:02:23,841 | INFO     | ..............................
[2025-10-13 07:03:12] 2025-10-13 11:02:24,086 | INFO     | 
[2025-10-13 07:03:12] 2025-10-13 11:02:24,087 | INFO     | job summary report
[2025-10-13 07:03:12] 2025-10-13 11:02:24,087 | INFO     | --------------------------------------------------
[2025-10-13 07:03:12] 2025-10-13 11:02:24,087 | INFO     | PanDA job id: 6842269295
[2025-10-13 07:03:12] 2025-10-13 11:02:24,088 | INFO     | task id: 46676269
[2025-10-13 07:03:12] 2025-10-13 11:02:24,088 | INFO     | errors: (none)
[2025-10-13 07:03:12] 2025-10-13 11:02:24,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:03:12] 2025-10-13 11:02:24,088 | INFO     | pilot state: finished 
[2025-10-13 07:03:12] 2025-10-13 11:02:24,088 | INFO     | transexitcode: 0
[2025-10-13 07:03:12] 2025-10-13 11:02:24,089 | INFO     | exeerrorcode: 0
[2025-10-13 07:03:12] 2025-10-13 11:02:24,089 | INFO     | exeerrordiag: 
[2025-10-13 07:03:12] 2025-10-13 11:02:24,089 | INFO     | exitcode: 0
[2025-10-13 07:03:12] 2025-10-13 11:02:24,089 | INFO     | exitmsg: OK
[2025-10-13 07:03:12] 2025-10-13 11:02:24,089 | INFO     | cpuconsumptiontime: 87626 s
[2025-10-13 07:03:12] 2025-10-13 11:02:24,090 | INFO     | nevents: 400
[2025-10-13 07:03:12] 2025-10-13 11:02:24,090 | INFO     | neventsw: 0
[2025-10-13 07:03:12] 2025-10-13 11:02:24,090 | INFO     | pid: 3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:24,090 | INFO     | pgrp: 3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:24,090 | INFO     | corecount: 9
[2025-10-13 07:03:12] 2025-10-13 11:02:24,091 | INFO     | event service: False
[2025-10-13 07:03:12] 2025-10-13 11:02:24,091 | INFO     | sizes: {0: 2348636, 1: 2348835, 7: 2349097, 12: 2349125, 10382: 2378299, 10384: 2387297, 10387: 2387481, 10394: 2387739}
[2025-10-13 07:03:12] 2025-10-13 11:02:24,091 | INFO     | --------------------------------------------------
[2025-10-13 07:03:12] 2025-10-13 11:02:24,091 | INFO     | 
[2025-10-13 07:03:12] 2025-10-13 11:02:24,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 07:03:12] 2025-10-13 11:02:24,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:03:12] 2025-10-13 11:02:24,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:03:12] 2025-10-13 11:02:24,128 | INFO     | job 6842269295 has completed (purged errors)
[2025-10-13 07:03:12] 2025-10-13 11:02:24,128 | INFO     | overall cleanup function is called
[2025-10-13 07:03:12] 2025-10-13 11:02:25,139 | INFO     | --- collectZombieJob: --- 10, [3213445]
[2025-10-13 07:03:12] 2025-10-13 11:02:25,140 | INFO     | zombie collector waiting for pid 3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:25,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:03:12] 2025-10-13 11:02:25,140 | INFO     | collected zombie processes
[2025-10-13 07:03:12] 2025-10-13 11:02:25,140 | INFO     | will attempt to kill all subprocesses of pid=3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:26,048 | INFO     | process IDs to be killed: [3213445] (in reverse order)
[2025-10-13 07:03:12] 2025-10-13 11:02:26,269 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:03:12] 2025-10-13 11:02:26,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:03:12] 2025-10-13 11:02:26,298 | INFO     | did not find any defunct processes belonging to 3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:26,325 | INFO     | did not find any defunct processes belonging to 3213445
[2025-10-13 07:03:12] 2025-10-13 11:02:26,326 | INFO     | ready for new job
[2025-10-13 07:03:12] 2025-10-13 11:02:26,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:03:12] 2025-10-13 11:02:26,330 | INFO     | ***************************************
[2025-10-13 07:03:12] 2025-10-13 11:02:26,330 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:03:12] 2025-10-13 11:02:26,331 | INFO     | ***************************************
[2025-10-13 07:03:12] 2025-10-13 11:02:26,331 | INFO     | 
[2025-10-13 07:03:12] 2025-10-13 11:02:26,353 | INFO     | architecture information:
[2025-10-13 07:03:12] 2025-10-13 11:02:26,353 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:03:12] 2025-10-13 11:02:26,377 | INFO     | cat /etc/os-release:
[2025-10-13 07:03:12] NAME="CentOS Linux"
[2025-10-13 07:03:12] VERSION="7 (Core)"
[2025-10-13 07:03:12] ID="centos"
[2025-10-13 07:03:12] ID_LIKE="rhel fedora"
[2025-10-13 07:03:12] VERSION_ID="7"
[2025-10-13 07:03:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:03:12] ANSI_COLOR="0;31"
[2025-10-13 07:03:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:03:12] HOME_URL="https://www.centos.org/"
[2025-10-13 07:03:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:03:12] 
[2025-10-13 07:03:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:03:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:03:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:03:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:03:12] 
[2025-10-13 07:03:12] 2025-10-13 11:02:26,378 | INFO     | ***************************************
[2025-10-13 07:03:12] 2025-10-13 11:02:26,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 07:03:12] 2025-10-13 11:02:26,910 | INFO     | sufficient remaining disk space (70914146304 B)
[2025-10-13 07:03:12] 2025-10-13 11:02:26,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:03:12] 2025-10-13 11:02:26,912 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:03:12] 2025-10-13 11:02:26,912 | INFO     | update_server=False
[2025-10-13 07:03:12] 2025-10-13 11:02:26,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:03:12] 2025-10-13 11:02:26,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:03:12] 2025-10-13 11:02:26,913 | INFO     | aborting loop
[2025-10-13 07:03:12] 2025-10-13 11:02:26,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:03:12] 2025-10-13 11:02:27,274 | INFO     | all data control threads have been joined
[2025-10-13 07:03:12] 2025-10-13 11:02:27,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:03:12] 2025-10-13 11:02:27,918 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:27,919 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:27,979 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:28,212 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:28,240 | INFO     | all payload control threads have been joined
[2025-10-13 07:03:12] 2025-10-13 11:02:28,280 | INFO     | [data] control thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:28,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:28,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:28,545 | INFO     | all job control threads have been joined
[2025-10-13 07:03:12] 2025-10-13 11:02:28,671 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:03:12] 2025-10-13 11:02:29,204 | INFO     | [job] validate thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,246 | INFO     | [payload] control thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,249 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,304 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,521 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:29,551 | INFO     | [job] control thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:30,103 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:30,938 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:03:12] 2025-10-13 11:02:56,589 | INFO     | PID=3194041 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 07:03:12] 2025-10-13 11:02:56,590 | INFO     | .. there are 9 such processes running
[2025-10-13 07:03:12] 2025-10-13 11:02:56,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:03:12] 2025-10-13 11:02:56,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:03:12] 2025-10-13 11:02:56,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:03:12] 2025-10-13 11:03:06,279 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:03:12] 2025-10-13 11:03:07,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482219849536)>', '<ExcThread(monitor, started 140481577076480)>']
[2025-10-13 07:03:12] 2025-10-13 11:03:07,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:03:12] 2025-10-13 11:03:07,647 | INFO     | [monitor] control thread has ended
[2025-10-13 07:03:12] 2025-10-13 11:03:12,252 | INFO     | all workflow threads have been joined
[2025-10-13 07:03:12] 2025-10-13 11:03:12,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:03:12] 2025-10-13 11:03:12,253 | INFO     | traces error code: 0
[2025-10-13 07:03:12] 2025-10-13 11:03:12,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:03:12] 2025-10-13 11:03:12,477 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:03:12] 2025-10-13 11:03:12,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:03:12] 2025-10-13 11:03:12,485 [wrapper] pilotpid: 3194041
[2025-10-13 07:03:12] 2025-10-13 11:03:12,488 [wrapper] Pilot exit status: 0
[2025-10-13 07:03:12] 2025-10-13 11:03:12,504 [wrapper] pandaids: 6842269295
[2025-10-13 07:03:12] 2025-10-13 11:03:12,604 [wrapper] cleanup supervisor_pilot 3598883 3194042
[2025-10-13 07:03:12] 2025-10-13 11:03:12,609 [wrapper] Test setup, not cleaning
[2025-10-13 07:03:12] 2025-10-13 11:03:12,612 [wrapper] apfmon messages muted
[2025-10-13 07:03:12] 2025-10-13 11:03:12,616 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:03:12] 2025-10-13 11:03:12,619 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:03:12]  *** Error codes and diagnostics ***
[2025-10-13 07:03:12]     "exeErrorCode": 0,
[2025-10-13 07:03:12]     "exeErrorDiag": "",
[2025-10-13 07:03:12]     "pilotErrorCode": 0,
[2025-10-13 07:03:12]     "pilotErrorDiag": "",
[2025-10-13 07:03:12]  *** Listing of results directory ***
[2025-10-13 07:03:12] total 416836
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:38 queuedata.json
[2025-10-13 07:03:12] -rwx------. 1 boincer umatlas     36292 Oct 12 23:39 runpilot2-wrapper.sh
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:03:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:08 run_atlas
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:08 job.xml
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas 222112685 Oct 13 04:08 EVNT.46676267._004795.pool.root.1
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 07:03:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:08 shared
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas    569690 Oct 13 04:08 input.tar.gz
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:08 boinc_lockfile
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:08 pandaJob.out
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas    972849 Oct 13 04:08 agis_schedconf.cvmfs.json
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:03:12] drwx------. 5 boincer umatlas      4096 Oct 13 04:08 pilot3
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas 197141984 Oct 13 07:01 HITS.46676269._096012.pool.root.1
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:01 boinc_task_state.xml
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas      1036 Oct 13 07:02 memory_monitor_summary.json
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas    421094 Oct 13 07:02 log.46676269._096012.job.log.tgz.1
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas      7824 Oct 13 07:02 heartbeat.json
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas        95 Oct 13 07:02 pilot_heartbeat.json
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 07:03 init_data.xml
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:03 wrapper_checkpoint.txt
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:03 boinc_mmap_file
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas      4824 Oct 13 07:03 pilotlog.txt
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas   1422330 Oct 13 07:03 log.46676269._096012.job.log.1
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas       357 Oct 13 07:03 output.list
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:03 runtime_log
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:03 result.tar.gz
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 07:03 runtime_log.err
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas       655 Oct 13 07:03 ezRKDmFaOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTfVMDmxiUATm.diag
[2025-10-13 07:03:12] -rw-r--r--. 1 boincer umatlas     20881 Oct 13 07:03 stderr.txt
[2025-10-13 07:03:12] HITS file was successfully produced:
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas 197141984 Oct 13 07:01 shared/HITS.pool.root.1
[2025-10-13 07:03:12]  *** Contents of shared directory: ***
[2025-10-13 07:03:12] total 411832
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas 222112685 Oct 13 04:08 ATLAS.root_0
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 07:03:12] -rw-r--r--. 2 boincer umatlas    569690 Oct 13 04:08 input.tar.gz
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas 197141984 Oct 13 07:01 HITS.pool.root.1
[2025-10-13 07:03:12] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:03 result.tar.gz
07:03:14 (3188326): run_atlas exited; CPU time 88728.995661
07:03:14 (3188326): called boinc_finish(0)

</stderr_txt>
]]>

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