Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:31:52 (3307120): wrapper (7.7.26015): starting
04:31:52 (3307120): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 04:31:52] Arguments: --nthreads 9
[2025-10-13 04:31:52] Threads: 9
[2025-10-13 04:31:52] Checking for CVMFS
[2025-10-13 04:31:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:31:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:31:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:31:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:31:53] 2.13.2.0 11275 65614 286124 151654 2 188 25007605 32935937 6528 16776704 10 135519203 99.640 123836861 8570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:31:53] CVMFS is ok
[2025-10-13 04:31:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:31:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:31:53] Further information can be found at the LHC@home message board.
[2025-10-13 04:31:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:31:53] Checking for apptainer binary...
[2025-10-13 04:31:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:31:53] Running /usr/bin/apptainer --version
[2025-10-13 04:31:53] apptainer version 1.4.3-1.el9
[2025-10-13 04:31:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:31:53] c6-12-25-1.aglt2.org
[2025-10-13 04:31:53] apptainer works
[2025-10-13 04:31:53] Set ATHENA_PROC_NUMBER=9
[2025-10-13 04:31:53] Set ATHENA_CORE_NUMBER=9
[2025-10-13 04:31:53] Starting ATLAS job with PandaID=6841069772
[2025-10-13 04:31:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:25:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:25:35] 2025-10-13 11:24:55,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:25:35] 2025-10-13 11:24:55,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:25:35] 2025-10-13 11:24:55,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:25:35] 2025-10-13 11:24:55,219 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:25:35] 2025-10-13 11:24:55,220 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,222 | INFO     | sum of deviations: 30877863219.000004
[2025-10-13 07:25:35] 2025-10-13 11:24:55,222 | INFO     | mean x: 1760349502.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,222 | INFO     | mean y: 2136227.5088757398
[2025-10-13 07:25:35] 2025-10-13 11:24:55,222 | INFO     | -- intersect: -36315937766.04003
[2025-10-13 07:25:35] 2025-10-13 11:24:55,222 | INFO     | intersect: -36315937766.04003
[2025-10-13 07:25:35] 2025-10-13 11:24:55,223 | INFO     | chi2: 3.3284915760014484
[2025-10-13 07:25:35] 2025-10-13 11:24:55,223 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,224 | INFO     | sum of deviations: 41524810752.49999
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | mean x: 1760349349.5
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | mean y: 2148569.4329268294
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | -- intersect: -53443543524.86224
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | intersect: -53443543524.86224
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | chi2: 2.6379718833227903
[2025-10-13 07:25:35] 2025-10-13 11:24:55,225 | INFO     | current chi2=2.6379718833227903 (change=20.74572450948446 %)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,226 | INFO     | right removable region: 163
[2025-10-13 07:25:35] 2025-10-13 11:24:55,226 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,227 | INFO     | sum of deviations: -681573679.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,228 | INFO     | mean x: 1760349654.5
[2025-10-13 07:25:35] 2025-10-13 11:24:55,228 | INFO     | mean y: 2173323.6097560977
[2025-10-13 07:25:35] 2025-10-13 11:24:55,228 | INFO     | -- intersect: 879412319.7351822
[2025-10-13 07:25:35] 2025-10-13 11:24:55,228 | INFO     | intersect: 879412319.7351822
[2025-10-13 07:25:35] 2025-10-13 11:24:55,228 | INFO     | chi2: 1.3032562982021303
[2025-10-13 07:25:35] 2025-10-13 11:24:55,229 | INFO     | current chi2=1.3032562982021303 (change=60.84543798762605 %)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,229 | INFO     | sum of square deviations: 1246386160.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,230 | INFO     | sum of deviations: -16606059341.000004
[2025-10-13 07:25:35] 2025-10-13 11:24:55,230 | INFO     | mean x: 1760349807.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,231 | INFO     | mean y: 2193262.025157233
[2025-10-13 07:25:35] 2025-10-13 11:24:55,231 | INFO     | -- intersect: 23455978528.671494
[2025-10-13 07:25:35] 2025-10-13 11:24:55,231 | INFO     | intersect: 23455978528.671494
[2025-10-13 07:25:35] 2025-10-13 11:24:55,231 | INFO     | chi2: 0.8127634786117361
[2025-10-13 07:25:35] 2025-10-13 11:24:55,231 | INFO     | current chi2=0.8127634786117361 (change=37.635944692309515 %)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,232 | INFO     | sum of square deviations: 1132458442.5
[2025-10-13 07:25:35] 2025-10-13 11:24:55,233 | INFO     | sum of deviations: -18574684555.5
[2025-10-13 07:25:35] 2025-10-13 11:24:55,233 | INFO     | mean x: 1760349959.5
[2025-10-13 07:25:35] 2025-10-13 11:24:55,233 | INFO     | mean y: 2195823.9025974027
[2025-10-13 07:25:35] 2025-10-13 11:24:55,233 | INFO     | -- intersect: 28875613141.377098
[2025-10-13 07:25:35] 2025-10-13 11:24:55,233 | INFO     | intersect: 28875613141.377098
[2025-10-13 07:25:35] 2025-10-13 11:24:55,234 | INFO     | chi2: 0.7667014377464796
[2025-10-13 07:25:35] 2025-10-13 11:24:55,234 | INFO     | current chi2=0.7667014377464796 (change=5.667336448721114 %)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,234 | INFO     | left removable region: 30
[2025-10-13 07:25:35] 2025-10-13 11:24:55,234 | INFO     | sum of square deviations: 729472282.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,235 | INFO     | sum of deviations: -4278660779.9999995
[2025-10-13 07:25:35] 2025-10-13 11:24:55,236 | INFO     | mean x: 1760350234.0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,236 | INFO     | mean y: 2206123.030075188
[2025-10-13 07:25:35] 2025-10-13 11:24:55,236 | INFO     | -- intersect: 10327398308.028849
[2025-10-13 07:25:35] 2025-10-13 11:24:55,236 | INFO     | intersect: 10327398308.028849
[2025-10-13 07:25:35] 2025-10-13 11:24:55,236 | INFO     | chi2: 0.054216914443331266
[2025-10-13 07:25:35] 2025-10-13 11:24:55,237 | INFO     | -- intersect: 10327398308.028849
[2025-10-13 07:25:35] 2025-10-13 11:24:55,237 | INFO     | current memory leak: -5.87 B/s (using 133 data points, chi2=0.05)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,237 | INFO     | could have reported an average CPU frequency of 2020 MHz (9 samples)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | ..............................
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . Timing measurements:
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . get job = 0 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . initial setup = 3 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . payload setup = 10 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . stage-in = 0 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . payload execution = 10309 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . stage-out = 1 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,238 | INFO     | . log creation = 0 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,239 | INFO     | ..............................
[2025-10-13 07:25:35] 2025-10-13 11:24:55,372 | INFO     | 
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | job summary report
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | --------------------------------------------------
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | PanDA job id: 6841069772
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | task id: 46676269
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | errors: (none)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | pilot state: finished 
[2025-10-13 07:25:35] 2025-10-13 11:24:55,373 | INFO     | transexitcode: 0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | exeerrorcode: 0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | exeerrordiag: 
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | exitcode: 0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | exitmsg: OK
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | cpuconsumptiontime: 84818 s
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | nevents: 400
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | neventsw: 0
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | pid: 3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:55,374 | INFO     | pgrp: 3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | corecount: 9
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | event service: False
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | sizes: {0: 2348579, 1: 2348663, 2: 2348862, 11: 2349124, 13: 2349152, 10324: 2378342, 10326: 2387340, 10329: 2387396, 10338: 2387654}
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | --------------------------------------------------
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | 
[2025-10-13 07:25:35] 2025-10-13 11:24:55,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:25:35] 2025-10-13 11:24:55,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,398 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,398 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:25:35] 2025-10-13 11:24:55,401 | INFO     | job 6841069772 has completed (purged errors)
[2025-10-13 07:25:35] 2025-10-13 11:24:55,401 | INFO     | overall cleanup function is called
[2025-10-13 07:25:35] 2025-10-13 11:24:56,410 | INFO     | --- collectZombieJob: --- 10, [3317782]
[2025-10-13 07:25:35] 2025-10-13 11:24:56,410 | INFO     | zombie collector waiting for pid 3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:56,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:25:35] 2025-10-13 11:24:56,410 | INFO     | collected zombie processes
[2025-10-13 07:25:35] 2025-10-13 11:24:56,410 | INFO     | will attempt to kill all subprocesses of pid=3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:56,857 | INFO     | process IDs to be killed: [3317782] (in reverse order)
[2025-10-13 07:25:35] 2025-10-13 11:24:56,975 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:25:35] 2025-10-13 11:24:56,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:25:35] 2025-10-13 11:24:56,990 | INFO     | did not find any defunct processes belonging to 3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:57,004 | INFO     | did not find any defunct processes belonging to 3317782
[2025-10-13 07:25:35] 2025-10-13 11:24:57,004 | INFO     | ready for new job
[2025-10-13 07:25:35] 2025-10-13 11:24:57,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:25:35] 2025-10-13 11:24:57,007 | INFO     | ***************************************
[2025-10-13 07:25:35] 2025-10-13 11:24:57,007 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:25:35] 2025-10-13 11:24:57,007 | INFO     | ***************************************
[2025-10-13 07:25:35] 2025-10-13 11:24:57,007 | INFO     | 
[2025-10-13 07:25:35] 2025-10-13 11:24:57,027 | INFO     | architecture information:
[2025-10-13 07:25:35] 2025-10-13 11:24:57,028 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:25:35] 2025-10-13 11:24:57,047 | INFO     | cat /etc/os-release:
[2025-10-13 07:25:35] NAME="CentOS Linux"
[2025-10-13 07:25:35] VERSION="7 (Core)"
[2025-10-13 07:25:35] ID="centos"
[2025-10-13 07:25:35] ID_LIKE="rhel fedora"
[2025-10-13 07:25:35] VERSION_ID="7"
[2025-10-13 07:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:25:35] ANSI_COLOR="0;31"
[2025-10-13 07:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:25:35] HOME_URL="https://www.centos.org/"
[2025-10-13 07:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:25:35] 
[2025-10-13 07:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:25:35] 
[2025-10-13 07:25:35] 2025-10-13 11:24:57,047 | INFO     | ***************************************
[2025-10-13 07:25:35] 2025-10-13 11:24:57,550 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:25:35] 2025-10-13 11:24:57,570 | INFO     | sufficient remaining disk space (74447847424 B)
[2025-10-13 07:25:35] 2025-10-13 11:24:57,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:25:35] 2025-10-13 11:24:57,571 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:25:35] 2025-10-13 11:24:57,571 | INFO     | update_server=False
[2025-10-13 07:25:35] 2025-10-13 11:24:57,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:25:35] 2025-10-13 11:24:57,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:25:35] 2025-10-13 11:24:58,107 | INFO     | all data control threads have been joined
[2025-10-13 07:25:35] 2025-10-13 11:24:58,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:25:35] 2025-10-13 11:24:58,274 | INFO     | aborting loop
[2025-10-13 07:25:35] 2025-10-13 11:24:58,577 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:58,677 | INFO     | all payload control threads have been joined
[2025-10-13 07:25:35] 2025-10-13 11:24:58,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:58,782 | INFO     | [job] validate thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:58,786 | INFO     | all job control threads have been joined
[2025-10-13 07:25:35] 2025-10-13 11:24:58,880 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:58,889 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:25:35] 2025-10-13 11:24:59,081 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,112 | INFO     | [data] control thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,279 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,284 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,366 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,683 | INFO     | [payload] control thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,791 | INFO     | [job] control thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:24:59,943 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:25:00,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:25:35] 2025-10-13 11:25:01,029 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:25:01,388 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:25:01,578 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:25:35] 2025-10-13 11:25:28,592 | INFO     | PID=3310934 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:25:35] 2025-10-13 11:25:28,592 | INFO     | .. there are 4 such processes running
[2025-10-13 07:25:35] 2025-10-13 11:25:28,593 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:25:35] 2025-10-13 11:25:28,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:25:35] 2025-10-13 11:25:28,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:25:35] 2025-10-13 11:25:29,784 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:25:35] 2025-10-13 11:25:30,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515782104896)>', '<ExcThread(monitor, started 140515139901184)>']
[2025-10-13 07:25:35] 2025-10-13 11:25:30,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:25:35] 2025-10-13 11:25:30,604 | INFO     | [monitor] control thread has ended
[2025-10-13 07:25:35] 2025-10-13 11:25:35,291 | INFO     | all workflow threads have been joined
[2025-10-13 07:25:35] 2025-10-13 11:25:35,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:25:35] 2025-10-13 11:25:35,292 | INFO     | traces error code: 0
[2025-10-13 07:25:35] 2025-10-13 11:25:35,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:25:35] 2025-10-13 11:25:35,450 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:25:35] 2025-10-13 11:25:35,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:25:35] 2025-10-13 11:25:35,459 [wrapper] pilotpid: 3310934
[2025-10-13 07:25:35] 2025-10-13 11:25:35,463 [wrapper] Pilot exit status: 0
[2025-10-13 07:25:35] 2025-10-13 11:25:35,476 [wrapper] pandaids: 6841069772
[2025-10-13 07:25:35] 2025-10-13 11:25:35,564 [wrapper] cleanup supervisor_pilot 3678862 3310935
[2025-10-13 07:25:35] 2025-10-13 11:25:35,569 [wrapper] Test setup, not cleaning
[2025-10-13 07:25:35] 2025-10-13 11:25:35,573 [wrapper] apfmon messages muted
[2025-10-13 07:25:35] 2025-10-13 11:25:35,577 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:25:35] 2025-10-13 11:25:35,580 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:25:35]  *** Error codes and diagnostics ***
[2025-10-13 07:25:35]     "exeErrorCode": 0,
[2025-10-13 07:25:35]     "exeErrorDiag": "",
[2025-10-13 07:25:35]     "pilotErrorCode": 0,
[2025-10-13 07:25:35]     "pilotErrorDiag": "",
[2025-10-13 07:25:35]  *** Listing of results directory ***
[2025-10-13 07:25:35] total 419688
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 07:25:35] -rwx------. 1 boincer umatlas     36292 Oct 12 21:03 runpilot2-wrapper.sh
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:03 queuedata.json
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:25:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:31 run_atlas
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:31 job.xml
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas 222214561 Oct 13 04:31 EVNT.46676267._004719.pool.root.1
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:31 start_atlas.sh
[2025-10-13 07:25:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:31 shared
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 04:31 input.tar.gz
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:31 boinc_lockfile
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 04:31 pandaJob.out
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas    972857 Oct 13 04:32 agis_schedconf.cvmfs.json
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:25:35] drwx------. 5 boincer umatlas      4096 Oct 13 04:32 pilot3
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas      6859 Oct 13 07:19 init_data.xml
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas 199953465 Oct 13 07:23 HITS.46676269._093812.pool.root.1
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:23 boinc_task_state.xml
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas      1035 Oct 13 07:24 memory_monitor_summary.json
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas    428502 Oct 13 07:24 log.46676269._093812.job.log.tgz.1
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas      7828 Oct 13 07:24 heartbeat.json
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas        95 Oct 13 07:25 pilot_heartbeat.json
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:25 boinc_mmap_file
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas      4823 Oct 13 07:25 pilotlog.txt
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:25 wrapper_checkpoint.txt
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas   1417949 Oct 13 07:25 log.46676269._093812.job.log.1
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas       357 Oct 13 07:25 output.list
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:25 runtime_log
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:25 result.tar.gz
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 07:25 runtime_log.err
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas       655 Oct 13 07:25 HMkKDmm9LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLJmNDmobGIfm.diag
[2025-10-13 07:25:35] -rw-r--r--. 1 boincer umatlas     20925 Oct 13 07:25 stderr.txt
[2025-10-13 07:25:35] HITS file was successfully produced:
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas 199953465 Oct 13 07:23 shared/HITS.pool.root.1
[2025-10-13 07:25:35]  *** Contents of shared directory: ***
[2025-10-13 07:25:35] total 414680
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas 222214561 Oct 13 04:31 ATLAS.root_0
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:31 start_atlas.sh
[2025-10-13 07:25:35] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 04:31 input.tar.gz
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas 199953465 Oct 13 07:23 HITS.pool.root.1
[2025-10-13 07:25:35] -rw-------. 1 boincer umatlas   1863680 Oct 13 07:25 result.tar.gz
07:25:37 (3307120): run_atlas exited; CPU time 85793.995512
07:25:37 (3307120): called boinc_finish(0)

</stderr_txt>
]]>

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