Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:43:47 (4077924): wrapper (7.7.26015): starting
19:43:47 (4077924): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:43:47] Arguments: --nthreads 4
[2025-10-13 19:43:47] Threads: 4
[2025-10-13 19:43:47] Checking for CVMFS
[2025-10-13 19:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:43:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:43:47] 2.9.2.0 1695166 6086 96808 151668 1 57 28241606 36864000 0 130560 0 6227642 99.993 204681 787 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:43:47] CVMFS is ok
[2025-10-13 19:43:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:43:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:43:47] Further information can be found at the LHC@home message board.
[2025-10-13 19:43:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:43:47] Checking for apptainer binary...
[2025-10-13 19:43:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:43:47] Running /usr/bin/apptainer --version
[2025-10-13 19:43:47] apptainer version 1.4.1-1.1
[2025-10-13 19:43:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:43:47] magicA244a
[2025-10-13 19:43:47] apptainer works
[2025-10-13 19:43:47] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:43:47] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:43:47] Starting ATLAS job with PandaID=6842086974
[2025-10-13 19:43:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:52:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:52:04] 2025-10-13 18:51:01,645 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 20:52:04] 2025-10-13 18:51:01,646 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:52:04] 2025-10-13 18:51:01,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:52:04] 2025-10-13 18:51:01,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:52:04] 2025-10-13 18:51:01,727 | INFO     | all payload control threads have been joined
[2025-10-13 20:52:04] 2025-10-13 18:51:01,984 | INFO     | all job control threads have been joined
[2025-10-13 20:52:04] 2025-10-13 18:51:02,651 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:02,651 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:02,651 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:02,689 | INFO     | all data control threads have been joined
[2025-10-13 20:52:04] 2025-10-13 18:51:02,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:52:04] 2025-10-13 18:51:02,733 | INFO     | [payload] control thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:02,984 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:02,989 | INFO     | [job] control thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,167 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:52:04] 2025-10-13 18:51:03,384 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,613 | INFO     | [job] validate thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,667 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,694 | INFO     | [data] control thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,699 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:03,739 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:04,712 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:07,238 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:11,762 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:52:04] 2025-10-13 18:51:12,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:52:04] 2025-10-13 18:51:59,072 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:52:04] 2025-10-13 18:51:59,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285011228480)>', '<ExcThread(monitor, started 140284159584000)>']
[2025-10-13 20:52:04] 2025-10-13 18:51:59,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:52:04] 2025-10-13 18:51:59,949 | INFO     | [monitor] control thread has ended
[2025-10-13 20:52:04] 2025-10-13 18:52:04,541 | INFO     | all workflow threads have been joined
[2025-10-13 20:52:04] 2025-10-13 18:52:04,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:52:04] 2025-10-13 18:52:04,542 | INFO     | traces error code: 0
[2025-10-13 20:52:04] 2025-10-13 18:52:04,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:52:04] 2025-10-13 18:52:04,596 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:52:04] 2025-10-13 18:52:04,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:52:04] 2025-10-13 18:52:04,601 [wrapper] pilotpid: 4081702
[2025-10-13 20:52:04] 2025-10-13 18:52:04,603 [wrapper] Pilot exit status: 0
[2025-10-13 20:52:04] 2025-10-13 18:52:04,611 [wrapper] pandaids: 6842086974
[2025-10-13 20:52:04] 2025-10-13 18:52:04,631 [wrapper] cleanup supervisor_pilot 4098426 4081703
[2025-10-13 20:52:04] 2025-10-13 18:52:04,633 [wrapper] Test setup, not cleaning
[2025-10-13 20:52:04] 2025-10-13 18:52:04,636 [wrapper] apfmon messages muted
[2025-10-13 20:52:04] 2025-10-13 18:52:04,639 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:52:04] 2025-10-13 18:52:04,641 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:52:04]  *** Error codes and diagnostics ***
[2025-10-13 20:52:04]     "exeErrorCode": 0,
[2025-10-13 20:52:04]     "exeErrorDiag": "",
[2025-10-13 20:52:04]     "pilotErrorCode": 0,
[2025-10-13 20:52:04]     "pilotErrorDiag": "",
[2025-10-13 20:52:04]  *** Listing of results directory ***
[2025-10-13 20:52:04] total 415740
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 20:52:04] -rwx------ 1 boinc boinc     36292 Oct 13 05:26 runpilot2-wrapper.sh
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:26 queuedata.json
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:52:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:43 run_atlas
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:43 job.xml
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc 219350151 Oct 13 19:43 EVNT.46676267._003531.pool.root.1
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc    569679 Oct 13 19:43 input.tar.gz
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:43 start_atlas.sh
[2025-10-13 20:52:04] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:43 shared
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:43 boinc_setup_complete
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      6438 Oct 13 19:43 init_data.xml
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:43 boinc_lockfile
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:43 pandaJob.out
[2025-10-13 20:52:04] -rw------- 1 boinc boinc    972791 Oct 13 19:43 agis_schedconf.cvmfs.json
[2025-10-13 20:52:04] -rw------- 1 boinc boinc   1560580 Oct 13 19:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:52:04] drwx------ 5 boinc boinc      4096 Oct 13 19:43 pilot3
[2025-10-13 20:52:04] -rw------- 1 boinc boinc        95 Oct 13 20:50 pilot_heartbeat.json
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:50 boinc_task_state.xml
[2025-10-13 20:52:04] -rw------- 1 boinc boinc 200760484 Oct 13 20:50 HITS.46676269._095818.pool.root.1
[2025-10-13 20:52:04] -rw------- 1 boinc boinc      1015 Oct 13 20:50 memory_monitor_summary.json
[2025-10-13 20:52:04] -rw------- 1 boinc boinc    259197 Oct 13 20:50 log.46676269._095818.job.log.tgz.1
[2025-10-13 20:52:04] -rw------- 1 boinc boinc      7756 Oct 13 20:50 heartbeat.json
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:51 boinc_mmap_file
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:51 wrapper_checkpoint.txt
[2025-10-13 20:52:04] -rw------- 1 boinc boinc      4628 Oct 13 20:52 pilotlog.txt
[2025-10-13 20:52:04] -rw------- 1 boinc boinc    601298 Oct 13 20:52 log.46676269._095818.job.log.1
[2025-10-13 20:52:04] -rw------- 1 boinc boinc       357 Oct 13 20:52 output.list
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:52 runtime_log
[2025-10-13 20:52:04] -rw------- 1 boinc boinc    880640 Oct 13 20:52 result.tar.gz
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      8797 Oct 13 20:52 runtime_log.err
[2025-10-13 20:52:04] -rw------- 1 boinc boinc       662 Oct 13 20:52 NsjLDmgNOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmydmNDm7Xq2lm.diag
[2025-10-13 20:52:04] -rw-r--r-- 1 boinc boinc      6885 Oct 13 20:52 stderr.txt
[2025-10-13 20:52:04] HITS file was successfully produced:
[2025-10-13 20:52:04] -rw------- 1 boinc boinc 200760484 Oct 13 20:50 shared/HITS.pool.root.1
[2025-10-13 20:52:04]  *** Contents of shared directory: ***
[2025-10-13 20:52:04] total 411712
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc 219350151 Oct 13 19:43 ATLAS.root_0
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc    569679 Oct 13 19:43 input.tar.gz
[2025-10-13 20:52:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:43 start_atlas.sh
[2025-10-13 20:52:04] -rw------- 1 boinc boinc 200760484 Oct 13 20:50 HITS.pool.root.1
[2025-10-13 20:52:04] -rw------- 1 boinc boinc    880640 Oct 13 20:52 result.tar.gz
20:52:05 (4077924): run_atlas exited; CPU time 15098.470976
20:52:05 (4077924): called boinc_finish(0)

</stderr_txt>
]]>

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