Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:33 (16974): wrapper (7.7.26015): starting
04:04:33 (16974): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:04:33] Arguments: --nthreads 8
[2025-10-13 04:04:33] Threads: 8
[2025-10-13 04:04:33] Checking for CVMFS
[2025-10-13 04:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:04:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:04:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:04:33] 2.11.2.0 13817 481735 275164 151653 2 57 9969030 18432000 2749 130560 8 211267078 99.523 263821598 24851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-13 04:04:33] CVMFS is ok
[2025-10-13 04:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:04:33] Further information can be found at the LHC@home message board.
[2025-10-13 04:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:04:33] Checking for apptainer binary...
[2025-10-13 04:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:04:33] Running /usr/bin/apptainer --version
[2025-10-13 04:04:33] apptainer version 1.3.2-1.el7
[2025-10-13 04:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:04:34] c-9-29.aglt2.org
[2025-10-13 04:04:34] apptainer works
[2025-10-13 04:04:34] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:04:34] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:04:34] Starting ATLAS job with PandaID=6841738067
[2025-10-13 04:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:57:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:57:09] 2025-10-13 10:56:28,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:57:09] 2025-10-13 10:56:28,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:57:09] 2025-10-13 10:56:28,303 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:57:09] 2025-10-13 10:56:28,304 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,305 | INFO     | sum of deviations: 7752465966.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,305 | INFO     | mean x: 1760347835.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,305 | INFO     | mean y: 2450914.8816568046
[2025-10-13 06:57:09] 2025-10-13 10:56:28,306 | INFO     | -- intersect: -9115873237.429697
[2025-10-13 06:57:09] 2025-10-13 10:56:28,306 | INFO     | intersect: -9115873237.429697
[2025-10-13 06:57:09] 2025-10-13 10:56:28,306 | INFO     | chi2: 2.079397870604754
[2025-10-13 06:57:09] 2025-10-13 10:56:28,307 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,308 | INFO     | sum of deviations: 18410730890.499992
[2025-10-13 06:57:09] 2025-10-13 10:56:28,308 | INFO     | mean x: 1760347682.5
[2025-10-13 06:57:09] 2025-10-13 10:56:28,308 | INFO     | mean y: 2463205.286585366
[2025-10-13 06:57:09] 2025-10-13 10:56:28,308 | INFO     | -- intersect: -23693570678.50774
[2025-10-13 06:57:09] 2025-10-13 10:56:28,308 | INFO     | intersect: -23693570678.50774
[2025-10-13 06:57:09] 2025-10-13 10:56:28,309 | INFO     | chi2: 1.3037967382001632
[2025-10-13 06:57:09] 2025-10-13 10:56:28,309 | INFO     | current chi2=1.3037967382001632 (change=37.29931358345681 %)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,309 | INFO     | sum of square deviations: 1246386160.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,310 | INFO     | sum of deviations: 17813877641.000004
[2025-10-13 06:57:09] 2025-10-13 10:56:28,311 | INFO     | mean x: 1760347530.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,311 | INFO     | mean y: 2462454.830188679
[2025-10-13 06:57:09] 2025-10-13 10:56:28,311 | INFO     | -- intersect: -25157168253.08507
[2025-10-13 06:57:09] 2025-10-13 10:56:28,311 | INFO     | intersect: -25157168253.08507
[2025-10-13 06:57:09] 2025-10-13 10:56:28,311 | INFO     | chi2: 1.3049435500553985
[2025-10-13 06:57:09] 2025-10-13 10:56:28,312 | INFO     | current chi2=1.3049435500553985 (change=-0.08795940514611796 %)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,312 | INFO     | right removable region: 158
[2025-10-13 06:57:09] 2025-10-13 10:56:28,312 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,313 | INFO     | sum of deviations: -13733909446.5
[2025-10-13 06:57:09] 2025-10-13 10:56:28,314 | INFO     | mean x: 1760347987.5
[2025-10-13 06:57:09] 2025-10-13 10:56:28,314 | INFO     | mean y: 2475921.4817073173
[2025-10-13 06:57:09] 2025-10-13 10:56:28,314 | INFO     | -- intersect: 17679082131.34963
[2025-10-13 06:57:09] 2025-10-13 10:56:28,314 | INFO     | intersect: 17679082131.34963
[2025-10-13 06:57:09] 2025-10-13 10:56:28,314 | INFO     | chi2: 0.8350070873372322
[2025-10-13 06:57:09] 2025-10-13 10:56:28,315 | INFO     | current chi2=0.8350070873372322 (change=59.84380386547256 %)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,315 | INFO     | sum of square deviations: 1246386160.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,316 | INFO     | sum of deviations: -8165716139.000001
[2025-10-13 06:57:09] 2025-10-13 10:56:28,316 | INFO     | mean x: 1760348140.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,316 | INFO     | mean y: 2468909.830188679
[2025-10-13 06:57:09] 2025-10-13 10:56:28,317 | INFO     | -- intersect: 11535414058.27169
[2025-10-13 06:57:09] 2025-10-13 10:56:28,317 | INFO     | intersect: 11535414058.27169
[2025-10-13 06:57:09] 2025-10-13 10:56:28,317 | INFO     | chi2: 0.8006794870931688
[2025-10-13 06:57:09] 2025-10-13 10:56:28,317 | INFO     | current chi2=0.8006794870931688 (change=4.111054955656866 %)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,317 | INFO     | left removable region: 20
[2025-10-13 06:57:09] 2025-10-13 10:56:28,318 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 06:57:09] 2025-10-13 10:56:28,319 | INFO     | sum of deviations: 1202105162.0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,319 | INFO     | mean x: 1760348109.5
[2025-10-13 06:57:09] 2025-10-13 10:56:28,319 | INFO     | mean y: 2483957.144927536
[2025-10-13 06:57:09] 2025-10-13 10:56:28,319 | INFO     | -- intersect: -2594373684.522269
[2025-10-13 06:57:09] 2025-10-13 10:56:28,319 | INFO     | intersect: -2594373684.522269
[2025-10-13 06:57:09] 2025-10-13 10:56:28,320 | INFO     | chi2: 0.0001646518003325017
[2025-10-13 06:57:09] 2025-10-13 10:56:28,320 | INFO     | -- intersect: -2594373684.522269
[2025-10-13 06:57:09] 2025-10-13 10:56:28,320 | INFO     | current memory leak: 1.48 B/s (using 138 data points, chi2=0.00)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,321 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,321 | INFO     | ..............................
[2025-10-13 06:57:09] 2025-10-13 10:56:28,321 | INFO     | . Timing measurements:
[2025-10-13 06:57:09] 2025-10-13 10:56:28,321 | INFO     | . get job = 0 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,321 | INFO     | . initial setup = 2 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | . payload setup = 4 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | . stage-in = 0 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | . payload execution = 10272 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | . stage-out = 0 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | . log creation = 0 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,322 | INFO     | ..............................
[2025-10-13 06:57:09] 2025-10-13 10:56:28,451 | INFO     | 
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | job summary report
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | --------------------------------------------------
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | PanDA job id: 6841738067
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | task id: 46676269
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | errors: (none)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:57:09] 2025-10-13 10:56:28,452 | INFO     | pilot state: finished 
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | transexitcode: 0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | exeerrorcode: 0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | exeerrordiag: 
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | exitcode: 0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | exitmsg: OK
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | cpuconsumptiontime: 76647 s
[2025-10-13 06:57:09] 2025-10-13 10:56:28,453 | INFO     | nevents: 400
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | neventsw: 0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | pid: 28152
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | pgrp: 28152
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | corecount: 8
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | event service: False
[2025-10-13 06:57:09] 2025-10-13 10:56:28,454 | INFO     | sizes: {0: 2347979, 1: 2348835, 5: 2349097, 12: 2349153, 10281: 2377857, 10283: 2386855, 10284: 2387039, 10288: 2387297}
[2025-10-13 06:57:09] 2025-10-13 10:56:28,455 | INFO     | --------------------------------------------------
[2025-10-13 06:57:09] 2025-10-13 10:56:28,455 | INFO     | 
[2025-10-13 06:57:09] 2025-10-13 10:56:28,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:57:09] 2025-10-13 10:56:28,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,480 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,480 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:57:09] 2025-10-13 10:56:28,483 | INFO     | job 6841738067 has completed (purged errors)
[2025-10-13 06:57:09] 2025-10-13 10:56:28,483 | INFO     | overall cleanup function is called
[2025-10-13 06:57:09] 2025-10-13 10:56:29,491 | INFO     | --- collectZombieJob: --- 10, [28152]
[2025-10-13 06:57:09] 2025-10-13 10:56:29,491 | INFO     | zombie collector waiting for pid 28152
[2025-10-13 06:57:09] 2025-10-13 10:56:29,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:57:09] 2025-10-13 10:56:29,491 | INFO     | collected zombie processes
[2025-10-13 06:57:09] 2025-10-13 10:56:29,492 | INFO     | will attempt to kill all subprocesses of pid=28152
[2025-10-13 06:57:09] 2025-10-13 10:56:29,702 | INFO     | process IDs to be killed: [28152] (in reverse order)
[2025-10-13 06:57:09] 2025-10-13 10:56:29,762 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:57:09] 2025-10-13 10:56:29,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:57:09] 2025-10-13 10:56:29,770 | INFO     | did not find any defunct processes belonging to 28152
[2025-10-13 06:57:09] 2025-10-13 10:56:29,777 | INFO     | did not find any defunct processes belonging to 28152
[2025-10-13 06:57:09] 2025-10-13 10:56:29,777 | INFO     | ready for new job
[2025-10-13 06:57:09] 2025-10-13 10:56:29,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:57:09] 2025-10-13 10:56:29,779 | INFO     | ***************************************
[2025-10-13 06:57:09] 2025-10-13 10:56:29,780 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:57:09] 2025-10-13 10:56:29,780 | INFO     | ***************************************
[2025-10-13 06:57:09] 2025-10-13 10:56:29,780 | INFO     | 
[2025-10-13 06:57:09] 2025-10-13 10:56:29,782 | INFO     | architecture information:
[2025-10-13 06:57:09] 2025-10-13 10:56:29,782 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:57:09] 2025-10-13 10:56:29,793 | INFO     | cat /etc/os-release:
[2025-10-13 06:57:09] NAME="CentOS Linux"
[2025-10-13 06:57:09] VERSION="7 (Core)"
[2025-10-13 06:57:09] ID="centos"
[2025-10-13 06:57:09] ID_LIKE="rhel fedora"
[2025-10-13 06:57:09] VERSION_ID="7"
[2025-10-13 06:57:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:57:09] ANSI_COLOR="0;31"
[2025-10-13 06:57:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:57:09] HOME_URL="https://www.centos.org/"
[2025-10-13 06:57:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:57:09] 
[2025-10-13 06:57:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:57:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:57:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:57:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:57:09] 
[2025-10-13 06:57:09] 2025-10-13 10:56:29,793 | INFO     | ***************************************
[2025-10-13 06:57:09] 2025-10-13 10:56:30,296 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:57:09] 2025-10-13 10:56:30,316 | INFO     | sufficient remaining disk space (104781053952 B)
[2025-10-13 06:57:09] 2025-10-13 10:56:30,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:57:09] 2025-10-13 10:56:30,317 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:57:09] 2025-10-13 10:56:30,317 | INFO     | update_server=False
[2025-10-13 06:57:09] 2025-10-13 10:56:30,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:57:09] 2025-10-13 10:56:30,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:57:09] 2025-10-13 10:56:30,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:57:09] 2025-10-13 10:56:30,455 | INFO     | all payload control threads have been joined
[2025-10-13 06:57:09] 2025-10-13 10:56:30,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:57:09] 2025-10-13 10:56:30,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:57:09] 2025-10-13 10:56:30,977 | INFO     | aborting loop
[2025-10-13 06:57:09] 2025-10-13 10:56:31,060 | INFO     | all data control threads have been joined
[2025-10-13 06:57:09] 2025-10-13 10:56:31,318 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,319 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,402 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,460 | INFO     | [payload] control thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,477 | INFO     | all job control threads have been joined
[2025-10-13 06:57:09] 2025-10-13 10:56:31,651 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,761 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:31,978 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,066 | INFO     | [data] control thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,204 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,205 | INFO     | [job] validate thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,482 | INFO     | [job] control thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,486 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,488 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:32,833 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:34,325 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:56:40,954 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:57:09] 2025-10-13 10:56:41,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:57:09] 2025-10-13 10:57:00,842 | INFO     | PID=21196 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:57:09] 2025-10-13 10:57:00,842 | INFO     | .. there are 4 such processes running
[2025-10-13 06:57:09] 2025-10-13 10:57:00,843 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:57:09] 2025-10-13 10:57:00,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:57:09] 2025-10-13 10:57:00,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:57:09] 2025-10-13 10:57:02,039 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:57:09] 2025-10-13 10:57:04,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288828540736)>', '<ExcThread(monitor, started 140288244832000)>']
[2025-10-13 06:57:09] 2025-10-13 10:57:04,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:57:09] 2025-10-13 10:57:04,863 | INFO     | [monitor] control thread has ended
[2025-10-13 06:57:09] 2025-10-13 10:57:09,141 | INFO     | all workflow threads have been joined
[2025-10-13 06:57:09] 2025-10-13 10:57:09,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:57:09] 2025-10-13 10:57:09,141 | INFO     | traces error code: 0
[2025-10-13 06:57:09] 2025-10-13 10:57:09,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:57:09] 2025-10-13 10:57:09,212 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:57:09] 2025-10-13 10:57:09,214 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:57:09] 2025-10-13 10:57:09,216 [wrapper] pilotpid: 21196
[2025-10-13 06:57:09] 2025-10-13 10:57:09,218 [wrapper] Pilot exit status: 0
[2025-10-13 06:57:09] 2025-10-13 10:57:09,228 [wrapper] pandaids: 6841738067
[2025-10-13 06:57:09] 2025-10-13 10:57:09,267 [wrapper] cleanup supervisor_pilot 28291 21197
[2025-10-13 06:57:09] 2025-10-13 10:57:09,269 [wrapper] Test setup, not cleaning
[2025-10-13 06:57:09] 2025-10-13 10:57:09,271 [wrapper] apfmon messages muted
[2025-10-13 06:57:09] 2025-10-13 10:57:09,286 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:57:09] 2025-10-13 10:57:09,288 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:57:09]  *** Error codes and diagnostics ***
[2025-10-13 06:57:09]     "exeErrorCode": 0,
[2025-10-13 06:57:09]     "exeErrorDiag": "",
[2025-10-13 06:57:09]     "pilotErrorCode": 0,
[2025-10-13 06:57:09]     "pilotErrorDiag": "",
[2025-10-13 06:57:09]  *** Listing of results directory ***
[2025-10-13 06:57:09] total 418152
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 06:57:09] -rwx------ 1 boincer umatlas     36292 Oct 12 23:02 runpilot2-wrapper.sh
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:02 queuedata.json
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:57:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:04 run_atlas
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:04 job.xml
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:04 input.tar.gz
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas 223087723 Oct 13 04:04 EVNT.46676267._003179.pool.root.1
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:04 start_atlas.sh
[2025-10-13 06:57:09] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:04 shared
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:04 boinc_lockfile
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:04 pandaJob.out
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas    972849 Oct 13 04:04 agis_schedconf.cvmfs.json
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas   1560580 Oct 13 04:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:57:09] drwx------ 5 boincer umatlas      4096 Oct 13 04:04 pilot3
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas      6035 Oct 13 06:49 init_data.xml
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas 197515455 Oct 13 06:55 HITS.46676269._095446.pool.root.1
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:55 boinc_task_state.xml
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas      1046 Oct 13 06:56 memory_monitor_summary.json
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas    403089 Oct 13 06:56 log.46676269._095446.job.log.tgz.1
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas      7827 Oct 13 06:56 heartbeat.json
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas        28 Oct 13 06:56 wrapper_checkpoint.txt
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:56 boinc_mmap_file
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas        95 Oct 13 06:57 pilot_heartbeat.json
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas      4894 Oct 13 06:57 pilotlog.txt
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas   1441523 Oct 13 06:57 log.46676269._095446.job.log.1
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas       357 Oct 13 06:57 output.list
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:57 runtime_log
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas   1863680 Oct 13 06:57 result.tar.gz
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas       659 Oct 13 06:57 V8RLDmF0NS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkZmNDm9uVJUn.diag
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas      8694 Oct 13 06:57 runtime_log.err
[2025-10-13 06:57:09] -rw-r--r-- 1 boincer umatlas     20864 Oct 13 06:57 stderr.txt
[2025-10-13 06:57:09] HITS file was successfully produced:
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas 197515455 Oct 13 06:55 shared/HITS.pool.root.1
[2025-10-13 06:57:09]  *** Contents of shared directory: ***
[2025-10-13 06:57:09] total 413148
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 04:04 input.tar.gz
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas 223087723 Oct 13 04:04 ATLAS.root_0
[2025-10-13 06:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:04 start_atlas.sh
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas 197515455 Oct 13 06:55 HITS.pool.root.1
[2025-10-13 06:57:09] -rw------- 1 boincer umatlas   1863680 Oct 13 06:57 result.tar.gz
06:57:11 (16974): run_atlas exited; CPU time 76879.207012
06:57:11 (16974): called boinc_finish(0)

</stderr_txt>
]]>

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