Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:27 (3589810): wrapper (7.7.26015): starting
19:04:27 (3589810): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:04:27] Arguments: --nthreads 3
[2025-10-13 19:04:27] Threads: 3
[2025-10-13 19:04:27] Checking for CVMFS
[2025-10-13 19:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:04:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:04:27] 2.9.2.0 1827752 5910 86616 151667 3 57 29605389 36864001 0 130560 0 4597500 99.991 208129 719 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:04:27] CVMFS is ok
[2025-10-13 19:04:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:04:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:04:27] Further information can be found at the LHC@home message board.
[2025-10-13 19:04:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:04:27] Checking for apptainer binary...
[2025-10-13 19:04:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:04:27] Running /usr/bin/apptainer --version
[2025-10-13 19:04:27] apptainer version 1.4.1-1.1
[2025-10-13 19:04:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:04:27] thA305b
[2025-10-13 19:04:27] apptainer works
[2025-10-13 19:04:27] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:04:27] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:04:27] Starting ATLAS job with PandaID=6841474839
[2025-10-13 19:04:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:30:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:30:47] VERSION_ID="7"
[2025-10-13 20:30:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:30:47] ANSI_COLOR="0;31"
[2025-10-13 20:30:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:30:47] HOME_URL="https://www.centos.org/"
[2025-10-13 20:30:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:30:47] 
[2025-10-13 20:30:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:30:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:30:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:30:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:30:47] 
[2025-10-13 20:30:47] 2025-10-13 18:29:40,781 | INFO     | ***************************************
[2025-10-13 20:30:47] 2025-10-13 18:29:41,284 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 20:30:47] 2025-10-13 18:29:41,297 | INFO     | sufficient remaining disk space (175990898688 B)
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | INFO     | update_server=False
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:30:47] 2025-10-13 18:29:41,298 | INFO     | aborting loop
[2025-10-13 20:30:47] 2025-10-13 18:29:41,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:30:47] 2025-10-13 18:29:41,805 | INFO     | all job control threads have been joined
[2025-10-13 20:30:47] 2025-10-13 18:29:42,297 | INFO     | all payload control threads have been joined
[2025-10-13 20:30:47] 2025-10-13 18:29:42,303 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:42,304 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:42,304 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:42,323 | INFO     | all data control threads have been joined
[2025-10-13 20:30:47] 2025-10-13 18:29:42,342 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:42,811 | INFO     | [job] control thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,190 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,303 | INFO     | [payload] control thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,329 | INFO     | [data] control thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,395 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,474 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,644 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,684 | INFO     | [job] validate thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,789 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:43,799 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:44,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:30:47] 2025-10-13 18:29:48,173 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:29:51,887 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:30:47] 2025-10-13 18:29:52,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:30:47] 2025-10-13 18:30:12,377 | INFO     | PID=3593528 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:30:47] 2025-10-13 18:30:12,377 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:30:47] 2025-10-13 18:30:12,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:30:47] 2025-10-13 18:30:12,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:30:47] 2025-10-13 18:30:40,510 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:30:47] 2025-10-13 18:30:42,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860961523520)>', '<ExcThread(monitor, started 139859570194176)>']
[2025-10-13 20:30:47] 2025-10-13 18:30:43,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:30:47] 2025-10-13 18:30:43,539 | INFO     | [monitor] control thread has ended
[2025-10-13 20:30:47] 2025-10-13 18:30:47,610 | INFO     | all workflow threads have been joined
[2025-10-13 20:30:47] 2025-10-13 18:30:47,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:30:47] 2025-10-13 18:30:47,610 | INFO     | traces error code: 0
[2025-10-13 20:30:47] 2025-10-13 18:30:47,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:30:47] 2025-10-13 18:30:47,663 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:30:47] 2025-10-13 18:30:47,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:30:47] 2025-10-13 18:30:47,668 [wrapper] pilotpid: 3593528
[2025-10-13 20:30:47] 2025-10-13 18:30:47,671 [wrapper] Pilot exit status: 0
[2025-10-13 20:30:47] 2025-10-13 18:30:47,679 [wrapper] pandaids: 6841474839
[2025-10-13 20:30:47] 2025-10-13 18:30:47,698 [wrapper] cleanup supervisor_pilot 3612238 3593529
[2025-10-13 20:30:47] 2025-10-13 18:30:47,701 [wrapper] Test setup, not cleaning
[2025-10-13 20:30:47] 2025-10-13 18:30:47,704 [wrapper] apfmon messages muted
[2025-10-13 20:30:47] 2025-10-13 18:30:47,706 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:30:47] 2025-10-13 18:30:47,709 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:30:47]  *** Error codes and diagnostics ***
[2025-10-13 20:30:47]     "exeErrorCode": 0,
[2025-10-13 20:30:47]     "exeErrorDiag": "",
[2025-10-13 20:30:47]     "pilotErrorCode": 0,
[2025-10-13 20:30:47]     "pilotErrorDiag": "",
[2025-10-13 20:30:47]  *** Listing of results directory ***
[2025-10-13 20:30:47] total 417496
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:44 queuedata.json
[2025-10-13 20:30:47] -rwx------ 1 boinc boinc     36292 Oct 13 04:45 runpilot2-wrapper.sh
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:30:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:04 run_atlas
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:04 job.xml
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc 222304785 Oct 13 19:04 EVNT.46676267._002690.pool.root.1
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc    569686 Oct 13 19:04 input.tar.gz
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:04 start_atlas.sh
[2025-10-13 20:30:47] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:04 shared
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:04 boinc_setup_complete
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      6447 Oct 13 19:04 init_data.xml
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:04 boinc_lockfile
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      2549 Oct 13 19:04 pandaJob.out
[2025-10-13 20:30:47] -rw------- 1 boinc boinc    972783 Oct 13 19:04 agis_schedconf.cvmfs.json
[2025-10-13 20:30:47] -rw------- 1 boinc boinc   1560580 Oct 13 19:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:30:47] drwx------ 5 boinc boinc      4096 Oct 13 19:04 pilot3
[2025-10-13 20:30:47] -rw------- 1 boinc boinc 199348358 Oct 13 20:29 HITS.46676269._095199.pool.root.1
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:29 boinc_task_state.xml
[2025-10-13 20:30:47] -rw------- 1 boinc boinc      1014 Oct 13 20:29 memory_monitor_summary.json
[2025-10-13 20:30:47] -rw------- 1 boinc boinc    240556 Oct 13 20:29 log.46676269._095199.job.log.tgz.1
[2025-10-13 20:30:47] -rw------- 1 boinc boinc      7744 Oct 13 20:29 heartbeat.json
[2025-10-13 20:30:47] -rw------- 1 boinc boinc        95 Oct 13 20:30 pilot_heartbeat.json
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:30 wrapper_checkpoint.txt
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:30 boinc_mmap_file
[2025-10-13 20:30:47] -rw------- 1 boinc boinc      4824 Oct 13 20:30 pilotlog.txt
[2025-10-13 20:30:47] -rw------- 1 boinc boinc    747101 Oct 13 20:30 log.46676269._095199.job.log.1
[2025-10-13 20:30:47] -rw------- 1 boinc boinc       357 Oct 13 20:30 output.list
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:30 runtime_log
[2025-10-13 20:30:47] -rw------- 1 boinc boinc   1003520 Oct 13 20:30 result.tar.gz
[2025-10-13 20:30:47] -rw------- 1 boinc boinc       659 Oct 13 20:30 sAuNDm7jNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4WmNDm9RESym.diag
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      8782 Oct 13 20:30 runtime_log.err
[2025-10-13 20:30:47] -rw-r--r-- 1 boinc boinc      8640 Oct 13 20:30 stderr.txt
[2025-10-13 20:30:47] HITS file was successfully produced:
[2025-10-13 20:30:47] -rw------- 1 boinc boinc 199348358 Oct 13 20:29 shared/HITS.pool.root.1
[2025-10-13 20:30:47]  *** Contents of shared directory: ***
[2025-10-13 20:30:47] total 413340
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc 222304785 Oct 13 19:04 ATLAS.root_0
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc    569686 Oct 13 19:04 input.tar.gz
[2025-10-13 20:30:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:04 start_atlas.sh
[2025-10-13 20:30:47] -rw------- 1 boinc boinc 199348358 Oct 13 20:29 HITS.pool.root.1
[2025-10-13 20:30:47] -rw------- 1 boinc boinc   1003520 Oct 13 20:30 result.tar.gz
20:30:48 (3589810): run_atlas exited; CPU time 14650.902410
20:30:48 (3589810): called boinc_finish(0)

</stderr_txt>
]]>

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