Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:20 (406129): wrapper (7.7.26015): starting
07:14:20 (406129): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:14:20] Arguments: --nthreads 8
[2025-10-13 07:14:20] Threads: 8
[2025-10-13 07:14:20] Checking for CVMFS
[2025-10-13 07:14:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:14:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:14:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:14:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:14:21] 2.13.2.0 24018 130628 437208 151659 1 64 27438258 32935937 37513 16776704 0 495431849 99.698 402809572 17422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:14:21] CVMFS is ok
[2025-10-13 07:14:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:14:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:14:21] Further information can be found at the LHC@home message board.
[2025-10-13 07:14:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:14:21] Checking for apptainer binary...
[2025-10-13 07:14:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:14:21] Running /usr/bin/apptainer --version
[2025-10-13 07:14:21] apptainer version 1.4.3-1.el9
[2025-10-13 07:14:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:14:21] c7-2-16.aglt2.org
[2025-10-13 07:14:21] apptainer works
[2025-10-13 07:14:21] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:14:21] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:14:21] Starting ATLAS job with PandaID=6841914327
[2025-10-13 07:14:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:01:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:01:57] 2025-10-13 13:01:25,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:01:57] 2025-10-13 13:01:25,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:01:57] 2025-10-13 13:01:25,115 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:01:57] 2025-10-13 13:01:25,115 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | sum of deviations: 1193819532.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | mean x: 1760357284.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | mean y: 2307851.9142857143
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | -- intersect: -5852768652.743146
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | intersect: -5852768652.743146
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | chi2: 2.1793408493651425
[2025-10-13 09:01:57] 2025-10-13 13:01:25,116 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | sum of deviations: 7775627330.500002
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | mean x: 1760357131.5
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | mean y: 2327678.57
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | -- intersect: -44144675647.82655
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | intersect: -44144675647.82655
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | chi2: 1.4983848548636807
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | current chi2=1.4983848548636807 (change=31.245961121677183 %)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,117 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | sum of deviations: 8022144526.000001
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | mean x: 1760356979.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | mean y: 2328552.652631579
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | -- intersect: -53121591249.43743
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | intersect: -53121591249.43743
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | chi2: 1.4987942050377607
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | current chi2=1.4987942050377607 (change=-0.02731942816635719 %)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | right removable region: 94
[2025-10-13 09:01:57] 2025-10-13 13:01:25,118 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | sum of deviations: -13714919872.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | mean x: 1760357436.5
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | mean y: 2353507.24
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | -- intersect: 77870375260.26775
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | intersect: 77870375260.26775
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | chi2: 0.7584547653208134
[2025-10-13 09:01:57] 2025-10-13 13:01:25,119 | INFO     | current chi2=0.7584547653208134 (change=65.19797416995343 %)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | sum of deviations: -14094986533.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | mean x: 1760357589.0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | mean y: 2354777.736842105
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | -- intersect: 93341634721.12943
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | intersect: 93341634721.12943
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | chi2: 0.7424771775687752
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | current chi2=0.7424771775687752 (change=2.1065973189950125 %)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,120 | INFO     | left removable region: 20
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | sum of deviations: -5726884014.5
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | mean x: 1760357558.5
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | mean y: 2380991.1486486485
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | -- intersect: 80248679621.448
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | intersect: 80248679621.448
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | chi2: 0.027391477102870276
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | -- intersect: 80248679621.448
[2025-10-13 09:01:57] 2025-10-13 13:01:25,121 | INFO     | current memory leak: -45.59 B/s (using 74 data points, chi2=0.03)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | could have reported an average CPU frequency of 3058 MHz (7 samples)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | ..............................
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . Timing measurements:
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . get job = 0 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . initial setup = 3 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . payload setup = 8 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . stage-in = 0 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . payload execution = 6364 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . stage-out = 0 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | . log creation = 0 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,122 | INFO     | ..............................
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | 
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | job summary report
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | --------------------------------------------------
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | PanDA job id: 6841914327
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | task id: 46676269
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | errors: (none)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | pilot state: finished 
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | transexitcode: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | exeerrorcode: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | exeerrordiag: 
[2025-10-13 09:01:57] 2025-10-13 13:01:25,195 | INFO     | exitcode: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | exitmsg: OK
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | cpuconsumptiontime: 33004 s
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | nevents: 400
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | neventsw: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | pid: 418253
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | pgrp: 418253
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | corecount: 8
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | event service: False
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | sizes: {0: 2348807, 8: 2349069, 11: 2349097, 6375: 2376262, 6376: 2376261, 6377: 2385315, 6378: 2385499, 6388: 2385693}
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | --------------------------------------------------
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | 
[2025-10-13 09:01:57] 2025-10-13 13:01:25,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 09:01:57] 2025-10-13 13:01:25,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | job 6841914327 has completed (purged errors)
[2025-10-13 09:01:57] 2025-10-13 13:01:25,230 | INFO     | overall cleanup function is called
[2025-10-13 09:01:57] 2025-10-13 13:01:26,238 | INFO     | --- collectZombieJob: --- 10, [418253]
[2025-10-13 09:01:57] 2025-10-13 13:01:26,238 | INFO     | zombie collector waiting for pid 418253
[2025-10-13 09:01:57] 2025-10-13 13:01:26,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:01:57] 2025-10-13 13:01:26,238 | INFO     | collected zombie processes
[2025-10-13 09:01:57] 2025-10-13 13:01:26,239 | INFO     | will attempt to kill all subprocesses of pid=418253
[2025-10-13 09:01:57] 2025-10-13 13:01:26,798 | INFO     | process IDs to be killed: [418253] (in reverse order)
[2025-10-13 09:01:57] 2025-10-13 13:01:26,962 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:01:57] 2025-10-13 13:01:26,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:01:57] 2025-10-13 13:01:26,987 | INFO     | did not find any defunct processes belonging to 418253
[2025-10-13 09:01:57] 2025-10-13 13:01:27,008 | INFO     | did not find any defunct processes belonging to 418253
[2025-10-13 09:01:57] 2025-10-13 13:01:27,008 | INFO     | ready for new job
[2025-10-13 09:01:57] 2025-10-13 13:01:27,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:01:57] 2025-10-13 13:01:27,010 | INFO     | ***************************************
[2025-10-13 09:01:57] 2025-10-13 13:01:27,010 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:01:57] 2025-10-13 13:01:27,010 | INFO     | ***************************************
[2025-10-13 09:01:57] 2025-10-13 13:01:27,010 | INFO     | 
[2025-10-13 09:01:57] 2025-10-13 13:01:27,045 | INFO     | architecture information:
[2025-10-13 09:01:57] 2025-10-13 13:01:27,053 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:01:57] 2025-10-13 13:01:27,087 | INFO     | cat /etc/os-release:
[2025-10-13 09:01:57] NAME="CentOS Linux"
[2025-10-13 09:01:57] VERSION="7 (Core)"
[2025-10-13 09:01:57] ID="centos"
[2025-10-13 09:01:57] ID_LIKE="rhel fedora"
[2025-10-13 09:01:57] VERSION_ID="7"
[2025-10-13 09:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:01:57] ANSI_COLOR="0;31"
[2025-10-13 09:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:01:57] HOME_URL="https://www.centos.org/"
[2025-10-13 09:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:01:57] 
[2025-10-13 09:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:01:57] 
[2025-10-13 09:01:57] 2025-10-13 13:01:27,087 | INFO     | ***************************************
[2025-10-13 09:01:57] 2025-10-13 13:01:27,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 09:01:57] 2025-10-13 13:01:27,609 | INFO     | sufficient remaining disk space (74100768768 B)
[2025-10-13 09:01:57] 2025-10-13 13:01:27,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:01:57] 2025-10-13 13:01:27,610 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:01:57] 2025-10-13 13:01:27,610 | INFO     | update_server=False
[2025-10-13 09:01:57] 2025-10-13 13:01:27,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:01:57] 2025-10-13 13:01:27,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:01:57] 2025-10-13 13:01:27,774 | INFO     | all data control threads have been joined
[2025-10-13 09:01:57] 2025-10-13 13:01:28,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:01:57] 2025-10-13 13:01:28,442 | INFO     | aborting loop
[2025-10-13 09:01:57] 2025-10-13 13:01:28,483 | INFO     | all payload control threads have been joined
[2025-10-13 09:01:57] 2025-10-13 13:01:28,615 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:28,782 | INFO     | [data] control thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:28,969 | INFO     | [job] validate thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:28,995 | INFO     | all job control threads have been joined
[2025-10-13 09:01:57] 2025-10-13 13:01:29,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,447 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,490 | INFO     | [payload] control thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,616 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,680 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,691 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,899 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:29,970 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:30,000 | INFO     | [job] control thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:30,095 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:30,193 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:30,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:01:57] 2025-10-13 13:01:30,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:01:57] 2025-10-13 13:01:31,225 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:34,522 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:01:57] 2025-10-13 13:01:48,204 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:01:57] 2025-10-13 13:01:49,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392927663936)>', '<ExcThread(monitor, started 140392573937408)>']
[2025-10-13 09:01:57] 2025-10-13 13:01:54,233 | INFO     | all workflow threads have been joined
[2025-10-13 09:01:57] 2025-10-13 13:01:54,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:01:57] 2025-10-13 13:01:54,233 | INFO     | traces error code: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:54,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:01:57] 2025-10-13 13:01:57,409 | INFO     | PID=410144 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:01:57] 2025-10-13 13:01:57,410 | INFO     | .. there are 41 such processes running
[2025-10-13 09:01:57] 2025-10-13 13:01:57,410 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:01:57] 2025-10-13 13:01:57,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:01:57] 2025-10-13 13:01:57,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:01:57] 2025-10-13 13:01:57,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:01:57] 2025-10-13 13:01:57,411 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 09:01:57] 2025-10-13 13:01:57,411 | INFO     | [monitor] control thread has ended
[2025-10-13 09:01:57] 2025-10-13 13:01:57,672 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:01:57] 2025-10-13 13:01:57,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:01:57] 2025-10-13 13:01:57,677 [wrapper] pilotpid: 410144
[2025-10-13 09:01:57] 2025-10-13 13:01:57,681 [wrapper] Pilot exit status: 0
[2025-10-13 09:01:57] 2025-10-13 13:01:57,709 [wrapper] pandaids: 6841914327
[2025-10-13 09:01:57] 2025-10-13 13:01:57,824 [wrapper] cleanup supervisor_pilot  708064 410145
[2025-10-13 09:01:57] 2025-10-13 13:01:57,830 [wrapper] Test setup, not cleaning
[2025-10-13 09:01:57] 2025-10-13 13:01:57,833 [wrapper] apfmon messages muted
[2025-10-13 09:01:57] 2025-10-13 13:01:57,835 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:01:57] 2025-10-13 13:01:57,837 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:01:57]  *** Error codes and diagnostics ***
[2025-10-13 09:01:57]     "exeErrorCode": 0,
[2025-10-13 09:01:57]     "exeErrorDiag": "",
[2025-10-13 09:01:57]     "pilotErrorCode": 0,
[2025-10-13 09:01:57]     "pilotErrorDiag": "",
[2025-10-13 09:01:57]  *** Listing of results directory ***
[2025-10-13 09:01:57] total 409460
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:15 queuedata.json
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 09:01:57] -rwx------. 1 boincer umatlas     36292 Oct 12 23:15 runpilot2-wrapper.sh
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:01:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:14 run_atlas
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:14 job.xml
[2025-10-13 09:01:57] -rw-r--r--. 2 boincer umatlas 221126703 Oct 13 07:14 EVNT.46676267._003211.pool.root.1
[2025-10-13 09:01:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:14 shared
[2025-10-13 09:01:57] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 07:14 input.tar.gz
[2025-10-13 09:01:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:14 start_atlas.sh
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:14 boinc_lockfile
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 07:14 pandaJob.out
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas    972497 Oct 13 07:14 agis_schedconf.cvmfs.json
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:01:57] drwx------. 5 boincer umatlas      4096 Oct 13 07:14 pilot3
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas      6935 Oct 13 08:57 init_data.xml
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas       529 Oct 13 09:00 boinc_task_state.xml
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas 191760834 Oct 13 09:00 HITS.46676269._095617.pool.root.1
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas      1040 Oct 13 09:01 memory_monitor_summary.json
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas        95 Oct 13 09:01 pilot_heartbeat.json
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas    350740 Oct 13 09:01 log.46676269._095617.job.log.tgz.1
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas      7803 Oct 13 09:01 heartbeat.json
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:01 boinc_mmap_file
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas        27 Oct 13 09:01 wrapper_checkpoint.txt
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas       892 Oct 13 09:01 pilotlog.txt
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas    904359 Oct 13 09:01 log.46676269._095617.job.log.1
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas       357 Oct 13 09:01 output.list
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:01 runtime_log
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas   1269760 Oct 13 09:01 result.tar.gz
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 09:01 runtime_log.err
[2025-10-13 09:01:57] -rw-------. 1 boincer umatlas       655 Oct 13 09:01 cAqNDm6COS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdbVMDmyVye9n.diag
[2025-10-13 09:01:57] -rw-r--r--. 1 boincer umatlas     20848 Oct 13 09:01 stderr.txt
[2025-10-13 09:01:58] HITS file was successfully produced:
[2025-10-13 09:01:58] -rw-------. 1 boincer umatlas 191760834 Oct 13 09:00 shared/HITS.pool.root.1
[2025-10-13 09:01:58]  *** Contents of shared directory: ***
[2025-10-13 09:01:58] total 405036
[2025-10-13 09:01:58] -rw-r--r--. 2 boincer umatlas 221126703 Oct 13 07:14 ATLAS.root_0
[2025-10-13 09:01:58] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 07:14 input.tar.gz
[2025-10-13 09:01:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:14 start_atlas.sh
[2025-10-13 09:01:58] -rw-------. 1 boincer umatlas 191760834 Oct 13 09:00 HITS.pool.root.1
[2025-10-13 09:01:58] -rw-------. 1 boincer umatlas   1269760 Oct 13 09:01 result.tar.gz
09:01:59 (406129): run_atlas exited; CPU time 33224.853595
09:01:59 (406129): called boinc_finish(0)

</stderr_txt>
]]>

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