Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:02:10 (3945923): wrapper (7.7.26015): starting
05:02:10 (3945923): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:02:10] Arguments: --nthreads 8
[2025-10-13 05:02:10] Threads: 8
[2025-10-13 05:02:10] Checking for CVMFS
[2025-10-13 05:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:02:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:02:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:02:11] 2.13.2.0 1266553 130476 518532 151654 2 564 29614099 32935936 20855 16776704 0 286837300 99.613 288979510 22186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:02:11] CVMFS is ok
[2025-10-13 05:02:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:02:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:02:11] Further information can be found at the LHC@home message board.
[2025-10-13 05:02:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:02:11] Checking for apptainer binary...
[2025-10-13 05:02:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:02:11] Running /usr/bin/apptainer --version
[2025-10-13 05:02:11] apptainer version 1.4.3-1.el9
[2025-10-13 05:02:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:02:12] c7-13-32.aglt2.org
[2025-10-13 05:02:12] apptainer works
[2025-10-13 05:02:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:02:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:02:12] Starting ATLAS job with PandaID=6842029288
[2025-10-13 05:02:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:35:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:35:06]  status=None
[2025-10-13 06:35:06]  status_code=0
[2025-10-13 06:35:06]  storage_token=
[2025-10-13 06:35:06]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6842029288/log.46676269._095722.job.log.tgz.1
[2025-10-13 06:35:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/53/log.46676269._095722.job.log.tgz.1
[2025-10-13 06:35:06]  workdir=None
[2025-10-13 06:35:06] ]
[2025-10-13 06:35:06] 2025-10-13 10:34:24,598 | INFO     | transferring file log.46676269._095722.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6842029288/log.46676269._095722.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:35:06] 2025-10-13 10:34:24,599 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6842029288/log.46676269._095722.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._095722.job
[2025-10-13 06:35:06] 2025-10-13 10:34:24,623 | INFO     | adding to output.list: log.46676269._095722.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/53/log.46676269._095722.job.log.tg
[2025-10-13 06:35:06] 2025-10-13 10:34:24,624 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:35:06] 2025-10-13 10:34:24,624 | INFO     | summary of transferred files:
[2025-10-13 06:35:06] 2025-10-13 10:34:24,624 | INFO     |  -- lfn=log.46676269._095722.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:35:06] 2025-10-13 10:34:24,624 | INFO     | stage-out finished correctly
[2025-10-13 06:35:06] 2025-10-13 10:34:25,737 | WARNING  | process 3957757 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:35:06] 2025-10-13 10:34:25,737 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842029288/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:35:06] 2025-10-13 10:34:26,035 | INFO     | number of running child processes to parent process 3957757: 1
[2025-10-13 06:35:06] 2025-10-13 10:34:26,035 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:35:06] 2025-10-13 10:34:26,240 | INFO     | time since job start (5515s) is within the limit (172800.0s)
[2025-10-13 06:35:06] 2025-10-13 10:34:27,390 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:35:06] 2025-10-13 10:34:28,247 | INFO     | time since job start (5517s) is within the limit (172800.0s)
[2025-10-13 06:35:06] 2025-10-13 10:34:28,488 | INFO     | job 6842029288 has state=finished
[2025-10-13 06:35:06] 2025-10-13 10:34:28,488 | INFO     | preparing for final server update for job 6842029288 in state='finished'
[2025-10-13 06:35:06] 2025-10-13 10:34:28,489 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:35:06] 2025-10-13 10:34:28,489 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:35:06] 2025-10-13 10:34:28,489 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:35:06] 2025-10-13 10:34:28,489 | INFO     | job 6842029288 has finished - writing final server update
[2025-10-13 06:35:06] 2025-10-13 10:34:28,489 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:35:06] 2025-10-13 10:34:28,490 | INFO     | executing command: lscpu
[2025-10-13 06:35:06] 2025-10-13 10:34:28,538 | INFO     | monitor loop #402: job 0:6842029288 is in state 'finished'
[2025-10-13 06:35:06] 2025-10-13 10:34:28,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:35:06] 2025-10-13 10:34:28,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:35:06] 2025-10-13 10:34:30,264 | INFO     | time since job start (5519s) is within the limit (172800.0s)
[2025-10-13 06:35:06] 2025-10-13 10:34:31,041 | INFO     | monitor loop #403: job 0:6842029288 is in state 'finished'
[2025-10-13 06:35:06] 2025-10-13 10:34:31,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,270 | INFO     | time since job start (5521s) is within the limit (172800.0s)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,835 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:35:06] 2025-10-13 10:34:32,840 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3281.291171875
[2025-10-13 06:35:06] 2025-10-13 10:34:32,849 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842029288/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,850 | INFO     | extracted standard info from prmon json
[2025-10-13 06:35:06] 2025-10-13 10:34:32,850 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:35:06] 2025-10-13 10:34:32,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:35:06] 2025-10-13 10:34:32,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:35:06] 2025-10-13 10:34:32,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:35:06] 2025-10-13 10:34:32,851 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | sum of deviations: -219927569.9999999
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | mean x: 1760349000.0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | mean y: 2174946.060240964
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | -- intersect: 2186055085.615433
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | intersect: 2186055085.615433
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | chi2: 0.06274812090902815
[2025-10-13 06:35:06] 2025-10-13 10:34:32,852 | INFO     | -- intersect: 2186055085.615433
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | current memory leak: -1.24 B/s (using 83 data points, chi2=0.06)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | could have reported an average CPU frequency of 3283 MHz (7 samples)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | ..............................
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . Timing measurements:
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . get job = 0 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . initial setup = 3 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . payload setup = 12 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . stage-in = 0 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . payload execution = 5475 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . stage-out = 0 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | . log creation = 0 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,853 | INFO     | ..............................
[2025-10-13 06:35:06] 2025-10-13 10:34:32,921 | INFO     | 
[2025-10-13 06:35:06] 2025-10-13 10:34:32,921 | INFO     | job summary report
[2025-10-13 06:35:06] 2025-10-13 10:34:32,921 | INFO     | --------------------------------------------------
[2025-10-13 06:35:06] 2025-10-13 10:34:32,921 | INFO     | PanDA job id: 6842029288
[2025-10-13 06:35:06] 2025-10-13 10:34:32,923 | INFO     | task id: 46676269
[2025-10-13 06:35:06] 2025-10-13 10:34:32,923 | INFO     | errors: (none)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:35:06] 2025-10-13 10:34:32,923 | INFO     | pilot state: finished 
[2025-10-13 06:35:06] 2025-10-13 10:34:32,923 | INFO     | transexitcode: 0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | exeerrorcode: 0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | exeerrordiag: 
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | exitcode: 0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | exitmsg: OK
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | cpuconsumptiontime: 31646 s
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | nevents: 400
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | neventsw: 0
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | pid: 3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | pgrp: 3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | corecount: 8
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | event service: False
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | sizes: {0: 2348636, 1: 2348835, 8: 2349097, 12: 2349125, 5491: 2375804, 5493: 2384802, 5495: 2384986, 5501: 2385180}
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | --------------------------------------------------
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | 
[2025-10-13 06:35:06] 2025-10-13 10:34:32,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | job 6842029288 has completed (purged errors)
[2025-10-13 06:35:06] 2025-10-13 10:34:32,946 | INFO     | overall cleanup function is called
[2025-10-13 06:35:06] 2025-10-13 10:34:33,954 | INFO     | --- collectZombieJob: --- 10, [3957757]
[2025-10-13 06:35:06] 2025-10-13 10:34:33,955 | INFO     | zombie collector waiting for pid 3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:33,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:35:06] 2025-10-13 10:34:33,955 | INFO     | collected zombie processes
[2025-10-13 06:35:06] 2025-10-13 10:34:33,955 | INFO     | will attempt to kill all subprocesses of pid=3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:34,243 | INFO     | process IDs to be killed: [3957757] (in reverse order)
[2025-10-13 06:35:06] 2025-10-13 10:34:34,365 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:35:06] 2025-10-13 10:34:34,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:35:06] 2025-10-13 10:34:34,379 | INFO     | did not find any defunct processes belonging to 3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:34,394 | INFO     | did not find any defunct processes belonging to 3957757
[2025-10-13 06:35:06] 2025-10-13 10:34:34,394 | INFO     | ready for new job
[2025-10-13 06:35:06] 2025-10-13 10:34:34,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:35:06] 2025-10-13 10:34:34,396 | INFO     | ***************************************
[2025-10-13 06:35:06] 2025-10-13 10:34:34,396 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:35:06] 2025-10-13 10:34:34,396 | INFO     | ***************************************
[2025-10-13 06:35:06] 2025-10-13 10:34:34,396 | INFO     | 
[2025-10-13 06:35:06] 2025-10-13 10:34:34,413 | INFO     | architecture information:
[2025-10-13 06:35:06] 2025-10-13 10:34:34,413 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:35:06] 2025-10-13 10:34:34,432 | INFO     | cat /etc/os-release:
[2025-10-13 06:35:06] NAME="CentOS Linux"
[2025-10-13 06:35:06] VERSION="7 (Core)"
[2025-10-13 06:35:06] ID="centos"
[2025-10-13 06:35:06] ID_LIKE="rhel fedora"
[2025-10-13 06:35:06] VERSION_ID="7"
[2025-10-13 06:35:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:35:06] ANSI_COLOR="0;31"
[2025-10-13 06:35:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:35:06] HOME_URL="https://www.centos.org/"
[2025-10-13 06:35:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:35:06] 
[2025-10-13 06:35:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:35:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:35:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:35:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:35:06] 
[2025-10-13 06:35:06] 2025-10-13 10:34:34,432 | INFO     | ***************************************
[2025-10-13 06:35:06] 2025-10-13 10:34:34,935 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 06:35:06] 2025-10-13 10:34:34,957 | INFO     | sufficient remaining disk space (95064948736 B)
[2025-10-13 06:35:06] 2025-10-13 10:34:34,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:35:06] 2025-10-13 10:34:34,957 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:35:06] 2025-10-13 10:34:34,957 | INFO     | update_server=False
[2025-10-13 06:35:06] 2025-10-13 10:34:34,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:35:06] 2025-10-13 10:34:34,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:35:06] 2025-10-13 10:34:34,958 | INFO     | aborting loop
[2025-10-13 06:35:06] 2025-10-13 10:34:35,099 | INFO     | all job control threads have been joined
[2025-10-13 06:35:06] 2025-10-13 10:34:35,127 | INFO     | all payload control threads have been joined
[2025-10-13 06:35:06] 2025-10-13 10:34:35,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:35:06] 2025-10-13 10:34:35,353 | INFO     | all data control threads have been joined
[2025-10-13 06:35:06] 2025-10-13 10:34:35,958 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:35,964 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,008 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,103 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,105 | INFO     | [job] control thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,132 | INFO     | [payload] control thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,212 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,359 | INFO     | [data] control thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:36,830 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,055 | INFO     | [job] validate thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,221 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,249 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,363 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:37,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:35:06] 2025-10-13 10:34:37,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:35:06] 2025-10-13 10:34:38,936 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:39,675 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:35:06] 2025-10-13 10:34:41,975 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:35:06] 2025-10-13 10:34:43,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669692278592)>', '<ExcThread(monitor, started 140669347677952)>']
[2025-10-13 06:35:06] 2025-10-13 10:34:48,522 | INFO     | all workflow threads have been joined
[2025-10-13 06:35:06] 2025-10-13 10:34:48,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:35:06] 2025-10-13 10:34:48,523 | INFO     | traces error code: 0
[2025-10-13 06:35:06] 2025-10-13 10:34:48,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:35:06] 2025-10-13 10:35:05,762 | INFO     | PID=3949631 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:35:06] 2025-10-13 10:35:05,763 | INFO     | .. there are 20 such processes running
[2025-10-13 06:35:06] 2025-10-13 10:35:05,764 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:35:06] 2025-10-13 10:35:05,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:35:06] 2025-10-13 10:35:05,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:35:06] 2025-10-13 10:35:05,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:35:06] 2025-10-13 10:35:05,764 | INFO     | [monitor] control thread has ended
[2025-10-13 06:35:06] 2025-10-13 10:35:05,891 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:35:06] 2025-10-13 10:35:05,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:35:06] 2025-10-13 10:35:05,897 [wrapper] pilotpid: 3949631
[2025-10-13 06:35:06] 2025-10-13 10:35:05,900 [wrapper] Pilot exit status: 0
[2025-10-13 06:35:06] 2025-10-13 10:35:05,916 [wrapper] pandaids: 6842029288
[2025-10-13 06:35:06] 2025-10-13 10:35:06,000 [wrapper] cleanup supervisor_pilot   51687 3949632
[2025-10-13 06:35:06] 2025-10-13 10:35:06,003 [wrapper] Test setup, not cleaning
[2025-10-13 06:35:06] 2025-10-13 10:35:06,007 [wrapper] apfmon messages muted
[2025-10-13 06:35:06] 2025-10-13 10:35:06,011 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:35:06] 2025-10-13 10:35:06,015 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:35:06]  *** Error codes and diagnostics ***
[2025-10-13 06:35:06]     "exeErrorCode": 0,
[2025-10-13 06:35:06]     "exeErrorDiag": "",
[2025-10-13 06:35:06]     "pilotErrorCode": 0,
[2025-10-13 06:35:06]     "pilotErrorDiag": "",
[2025-10-13 06:35:06]  *** Listing of results directory ***
[2025-10-13 06:35:06] total 408304
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 06:35:06] -rwx------. 1 boincer umatlas     36292 Oct 12 23:20 runpilot2-wrapper.sh
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:20 queuedata.json
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:35:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:02 run_atlas
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:02 job.xml
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas 222304785 Oct 13 05:02 EVNT.46676267._002690.pool.root.1
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:02 start_atlas.sh
[2025-10-13 06:35:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:02 shared
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 05:02 input.tar.gz
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:02 boinc_lockfile
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:02 pandaJob.out
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas    972857 Oct 13 05:02 agis_schedconf.cvmfs.json
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:35:06] drwx------. 5 boincer umatlas      4096 Oct 13 05:02 pilot3
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas      6898 Oct 13 06:28 init_data.xml
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas 189601225 Oct 13 06:33 HITS.46676269._095722.pool.root.1
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:33 boinc_task_state.xml
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas      1031 Oct 13 06:34 memory_monitor_summary.json
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas    348280 Oct 13 06:34 log.46676269._095722.job.log.tgz.1
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas      7776 Oct 13 06:34 heartbeat.json
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:35 wrapper_checkpoint.txt
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:35 boinc_mmap_file
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas        95 Oct 13 06:35 pilot_heartbeat.json
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas       823 Oct 13 06:35 pilotlog.txt
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas    799501 Oct 13 06:35 log.46676269._095722.job.log.1
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas       357 Oct 13 06:35 output.list
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:35 runtime_log
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas   1167360 Oct 13 06:35 result.tar.gz
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 06:35 runtime_log.err
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas       652 Oct 13 06:35 gtGLDmfHOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmocmNDm9e9Q8m.diag
[2025-10-13 06:35:06] -rw-r--r--. 1 boincer umatlas     22050 Oct 13 06:35 stderr.txt
[2025-10-13 06:35:06] HITS file was successfully produced:
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas 189601225 Oct 13 06:33 shared/HITS.pool.root.1
[2025-10-13 06:35:06]  *** Contents of shared directory: ***
[2025-10-13 06:35:06] total 403980
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas 222304785 Oct 13 05:02 ATLAS.root_0
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:02 start_atlas.sh
[2025-10-13 06:35:06] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 05:02 input.tar.gz
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas 189601225 Oct 13 06:33 HITS.pool.root.1
[2025-10-13 06:35:06] -rw-------. 1 boincer umatlas   1167360 Oct 13 06:35 result.tar.gz
06:35:08 (3945923): run_atlas exited; CPU time 31684.152231
06:35:08 (3945923): called boinc_finish(0)

</stderr_txt>
]]>

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