Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:24:18 (36599): wrapper (7.7.26015): starting
06:24:18 (36599): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 06:24:18] Arguments: --nthreads 9
[2025-10-13 06:24:18] Threads: 9
[2025-10-13 06:24:18] Checking for CVMFS
[2025-10-13 06:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:24:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:24:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:24:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:24:20] 2.13.2.0 2849342 130557 526148 151658 0 448 19329224 32935937 31223 16776704 0 269191823 99.644 246424620 20826 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:24:20] CVMFS is ok
[2025-10-13 06:24:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:24:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:24:20] Further information can be found at the LHC@home message board.
[2025-10-13 06:24:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:24:20] Checking for apptainer binary...
[2025-10-13 06:24:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:24:20] Running /usr/bin/apptainer --version
[2025-10-13 06:24:20] apptainer version 1.4.3-1.el9
[2025-10-13 06:24:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:24:20] c6-8-25-4.aglt2.org
[2025-10-13 06:24:20] apptainer works
[2025-10-13 06:24:20] Set ATHENA_PROC_NUMBER=9
[2025-10-13 06:24:20] Set ATHENA_CORE_NUMBER=9
[2025-10-13 06:24:20] Starting ATLAS job with PandaID=6842404235
[2025-10-13 06:24:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:51:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:51:07] 2025-10-13 12:50:06,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:51:07] 2025-10-13 12:50:06,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:51:07] 2025-10-13 12:50:06,604 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:51:07] 2025-10-13 12:50:06,605 | INFO     | sum of square deviations: 887783559.098591
[2025-10-13 08:51:07] 2025-10-13 12:50:06,605 | INFO     | sum of deviations: 8948789986.887337
[2025-10-13 08:51:07] 2025-10-13 12:50:06,605 | INFO     | mean x: 1760355470.6760564
[2025-10-13 08:51:07] 2025-10-13 12:50:06,606 | INFO     | mean y: 2191222.584507042
[2025-10-13 08:51:07] 2025-10-13 12:50:06,606 | INFO     | -- intersect: -17742056514.265976
[2025-10-13 08:51:07] 2025-10-13 12:50:06,606 | INFO     | intersect: -17742056514.265976
[2025-10-13 08:51:07] 2025-10-13 12:50:06,606 | INFO     | chi2: 3.008849640224936
[2025-10-13 08:51:07] 2025-10-13 12:50:06,606 | INFO     | sum of square deviations: 797268556.4379529
[2025-10-13 08:51:07] 2025-10-13 12:50:06,607 | INFO     | sum of deviations: 17406465543.014603
[2025-10-13 08:51:07] 2025-10-13 12:50:06,607 | INFO     | mean x: 1760355318.1824818
[2025-10-13 08:51:07] 2025-10-13 12:50:06,609 | INFO     | mean y: 2205053.8394160583
[2025-10-13 08:51:07] 2025-10-13 12:50:06,609 | INFO     | -- intersect: -38430972753.02991
[2025-10-13 08:51:07] 2025-10-13 12:50:06,610 | INFO     | intersect: -38430972753.02991
[2025-10-13 08:51:07] 2025-10-13 12:50:06,610 | INFO     | chi2: 2.2222863138485307
[2025-10-13 08:51:07] 2025-10-13 12:50:06,610 | INFO     | current chi2=2.2222863138485307 (change=26.141662775731234 %)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,610 | INFO     | sum of square deviations: 713125766.2651502
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | sum of deviations: 16854518405.280302
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | mean x: 1760355165.689394
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | mean y: 2204049.128787879
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | -- intersect: -41603274175.746414
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | intersect: -41603274175.746414
[2025-10-13 08:51:07] 2025-10-13 12:50:06,611 | INFO     | chi2: 2.2250453080927994
[2025-10-13 08:51:07] 2025-10-13 12:50:06,612 | INFO     | current chi2=2.2250453080927994 (change=-0.12415116031969506 %)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,612 | INFO     | right removable region: 131
[2025-10-13 08:51:07] 2025-10-13 12:50:06,612 | INFO     | sum of square deviations: 797253306.4379529
[2025-10-13 08:51:07] 2025-10-13 12:50:06,613 | INFO     | sum of deviations: -17670205272.503647
[2025-10-13 08:51:07] 2025-10-13 12:50:06,613 | INFO     | mean x: 1760355623.1824818
[2025-10-13 08:51:07] 2025-10-13 12:50:06,613 | INFO     | mean y: 2235730.5401459853
[2025-10-13 08:51:07] 2025-10-13 12:50:06,613 | INFO     | -- intersect: 39018499398.63116
[2025-10-13 08:51:07] 2025-10-13 12:50:06,613 | INFO     | intersect: 39018499398.63116
[2025-10-13 08:51:07] 2025-10-13 12:50:06,621 | INFO     | chi2: 1.01253719143664
[2025-10-13 08:51:07] 2025-10-13 12:50:06,622 | INFO     | current chi2=1.01253719143664 (change=66.34802956252263 %)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,622 | INFO     | sum of square deviations: 713095266.2651502
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | sum of deviations: -21825483702.87879
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | mean x: 1760355775.689394
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | mean y: 2243105.515151515
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | -- intersect: 53880901555.74736
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | intersect: 53880901555.74736
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | chi2: 0.9006603806354218
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | current chi2=0.9006603806354218 (change=11.04915569989894 %)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,623 | INFO     | left removable region: 20
[2025-10-13 08:51:07] 2025-10-13 12:50:06,624 | INFO     | sum of square deviations: 424016874.23423517
[2025-10-13 08:51:07] 2025-10-13 12:50:06,624 | INFO     | sum of deviations: -9214358170.756756
[2025-10-13 08:51:07] 2025-10-13 12:50:06,624 | INFO     | mean x: 1760355745.2072072
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | mean y: 2254180.945945946
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | -- intersect: 38256741985.42912
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | intersect: 38256741985.42912
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | chi2: 0.06185087718400115
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | -- intersect: 38256741985.42912
[2025-10-13 08:51:07] 2025-10-13 12:50:06,625 | INFO     | current memory leak: -21.73 B/s (using 111 data points, chi2=0.06)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,626 | INFO     | could have reported an average CPU frequency of 2542 MHz (8 samples)
[2025-10-13 08:51:07] 2025-10-13 12:50:06,626 | INFO     | ..............................
[2025-10-13 08:51:07] 2025-10-13 12:50:06,626 | INFO     | . Timing measurements:
[2025-10-13 08:51:07] 2025-10-13 12:50:06,626 | INFO     | . get job = 0 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . initial setup = 2 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . payload setup = 21 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . stage-in = 0 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . payload execution = 8638 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . stage-out = 1 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | . log creation = 0 s
[2025-10-13 08:51:07] 2025-10-13 12:50:06,627 | INFO     | ..............................
[2025-10-13 08:51:07] 2025-10-13 12:50:07,138 | INFO     | 
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | job summary report
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | --------------------------------------------------
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | PanDA job id: 6842404235
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | task id: 46676269
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | errors: (none)
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | pilot state: finished 
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | transexitcode: 0
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | exeerrorcode: 0
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | exeerrordiag: 
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | exitcode: 0
[2025-10-13 08:51:07] 2025-10-13 12:50:07,139 | INFO     | exitmsg: OK
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | cpuconsumptiontime: 44951 s
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | nevents: 400
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | neventsw: 0
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | pid: 47837
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | pgrp: 47837
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | corecount: 9
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | event service: False
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | sizes: {0: 2348585, 1: 2348784, 12: 2348784, 13: 2349074, 23: 2349130, 8663: 2377377, 8665: 2386375, 8669: 2386431, 8679: 2386625}
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | --------------------------------------------------
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | 
[2025-10-13 08:51:07] 2025-10-13 12:50:07,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 08:51:07] 2025-10-13 12:50:07,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:51:07] 2025-10-13 12:50:07,237 | INFO     | job 6842404235 has completed (purged errors)
[2025-10-13 08:51:07] 2025-10-13 12:50:07,238 | INFO     | overall cleanup function is called
[2025-10-13 08:51:07] 2025-10-13 12:50:08,246 | INFO     | --- collectZombieJob: --- 10, [47837]
[2025-10-13 08:51:07] 2025-10-13 12:50:08,247 | INFO     | zombie collector waiting for pid 47837
[2025-10-13 08:51:07] 2025-10-13 12:50:08,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:51:07] 2025-10-13 12:50:08,247 | INFO     | collected zombie processes
[2025-10-13 08:51:07] 2025-10-13 12:50:08,247 | INFO     | will attempt to kill all subprocesses of pid=47837
[2025-10-13 08:51:07] 2025-10-13 12:50:08,738 | INFO     | process IDs to be killed: [47837] (in reverse order)
[2025-10-13 08:51:07] 2025-10-13 12:50:08,879 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:51:07] 2025-10-13 12:50:08,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:51:07] 2025-10-13 12:50:08,900 | INFO     | did not find any defunct processes belonging to 47837
[2025-10-13 08:51:07] 2025-10-13 12:50:08,921 | INFO     | did not find any defunct processes belonging to 47837
[2025-10-13 08:51:07] 2025-10-13 12:50:08,921 | INFO     | ready for new job
[2025-10-13 08:51:07] 2025-10-13 12:50:08,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:51:07] 2025-10-13 12:50:08,924 | INFO     | ***************************************
[2025-10-13 08:51:07] 2025-10-13 12:50:08,925 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:51:07] 2025-10-13 12:50:08,925 | INFO     | ***************************************
[2025-10-13 08:51:07] 2025-10-13 12:50:08,925 | INFO     | 
[2025-10-13 08:51:07] 2025-10-13 12:50:08,949 | INFO     | architecture information:
[2025-10-13 08:51:07] 2025-10-13 12:50:08,949 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:51:07] 2025-10-13 12:50:08,969 | INFO     | cat /etc/os-release:
[2025-10-13 08:51:07] NAME="CentOS Linux"
[2025-10-13 08:51:07] VERSION="7 (Core)"
[2025-10-13 08:51:07] ID="centos"
[2025-10-13 08:51:07] ID_LIKE="rhel fedora"
[2025-10-13 08:51:07] VERSION_ID="7"
[2025-10-13 08:51:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:51:07] ANSI_COLOR="0;31"
[2025-10-13 08:51:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:51:07] HOME_URL="https://www.centos.org/"
[2025-10-13 08:51:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:51:07] 
[2025-10-13 08:51:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:51:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:51:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:51:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:51:07] 
[2025-10-13 08:51:07] 2025-10-13 12:50:08,969 | INFO     | ***************************************
[2025-10-13 08:51:07] 2025-10-13 12:50:09,474 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 08:51:07] 2025-10-13 12:50:09,517 | INFO     | sufficient remaining disk space (74143760384 B)
[2025-10-13 08:51:07] 2025-10-13 12:50:09,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:51:07] 2025-10-13 12:50:09,518 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:51:07] 2025-10-13 12:50:09,518 | INFO     | update_server=False
[2025-10-13 08:51:07] 2025-10-13 12:50:09,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:51:07] 2025-10-13 12:50:09,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:51:07] 2025-10-13 12:50:09,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:51:07] 2025-10-13 12:50:09,519 | INFO     | aborting loop
[2025-10-13 08:51:07] 2025-10-13 12:50:09,691 | INFO     | all data control threads have been joined
[2025-10-13 08:51:07] 2025-10-13 12:50:09,727 | INFO     | all payload control threads have been joined
[2025-10-13 08:51:07] 2025-10-13 12:50:09,727 | INFO     | all job control threads have been joined
[2025-10-13 08:51:07] 2025-10-13 12:50:10,525 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,525 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,541 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,598 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,672 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,697 | INFO     | [data] control thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,739 | INFO     | [job] control thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:10,740 | INFO     | [payload] control thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:11,316 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:11,374 | INFO     | [job] validate thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:11,517 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:11,525 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:11,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:51:07] 2025-10-13 12:50:11,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:51:07] 2025-10-13 12:50:12,027 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:12,747 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:15,838 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:19,807 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:51:07] 2025-10-13 12:50:20,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:51:07] 2025-10-13 12:50:39,393 | INFO     | PID=40342 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:51:07] 2025-10-13 12:50:39,394 | INFO     | .. there are 32 such processes running
[2025-10-13 08:51:07] 2025-10-13 12:50:39,394 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:51:07] 2025-10-13 12:50:39,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:51:07] 2025-10-13 12:50:39,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:51:07] 2025-10-13 12:51:01,112 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:51:07] 2025-10-13 12:51:02,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046304020288)>', '<ExcThread(monitor, started 140045579179776)>']
[2025-10-13 08:51:07] 2025-10-13 12:51:02,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:51:07] 2025-10-13 12:51:02,543 | INFO     | [monitor] control thread has ended
[2025-10-13 08:51:07] 2025-10-13 12:51:07,181 | INFO     | all workflow threads have been joined
[2025-10-13 08:51:07] 2025-10-13 12:51:07,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:51:07] 2025-10-13 12:51:07,183 | INFO     | traces error code: 0
[2025-10-13 08:51:07] 2025-10-13 12:51:07,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:51:07] 2025-10-13 12:51:07,410 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:51:07] 2025-10-13 12:51:07,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:51:07] 2025-10-13 12:51:07,418 [wrapper] pilotpid: 40342
[2025-10-13 08:51:07] 2025-10-13 12:51:07,422 [wrapper] Pilot exit status: 0
[2025-10-13 08:51:07] 2025-10-13 12:51:07,437 [wrapper] pandaids: 6842404235
[2025-10-13 08:51:07] 2025-10-13 12:51:07,541 [wrapper] cleanup supervisor_pilot  491346 40343
[2025-10-13 08:51:07] 2025-10-13 12:51:07,553 [wrapper] Test setup, not cleaning
[2025-10-13 08:51:07] 2025-10-13 12:51:07,556 [wrapper] apfmon messages muted
[2025-10-13 08:51:07] 2025-10-13 12:51:07,560 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:51:07] 2025-10-13 12:51:07,563 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:51:07]  *** Error codes and diagnostics ***
[2025-10-13 08:51:07]     "exeErrorCode": 0,
[2025-10-13 08:51:07]     "exeErrorDiag": "",
[2025-10-13 08:51:07]     "pilotErrorCode": 0,
[2025-10-13 08:51:07]     "pilotErrorDiag": "",
[2025-10-13 08:51:07]  *** Listing of results directory ***
[2025-10-13 08:51:07] total 408976
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:46 queuedata.json
[2025-10-13 08:51:07] -rwx------. 1 boincer umatlas     36292 Oct 12 23:47 runpilot2-wrapper.sh
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:51:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:24 run_atlas
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:24 job.xml
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas 219983135 Oct 13 06:24 EVNT.46676267._003495.pool.root.1
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:24 start_atlas.sh
[2025-10-13 08:51:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:24 shared
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 06:24 input.tar.gz
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:24 boinc_lockfile
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:24 pandaJob.out
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas    972497 Oct 13 06:24 agis_schedconf.cvmfs.json
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:24 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:51:07] drwx------. 5 boincer umatlas      4096 Oct 13 06:24 pilot3
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 08:48 init_data.xml
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas 191834692 Oct 13 08:49 HITS.46676269._096151.pool.root.1
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas       529 Oct 13 08:49 boinc_task_state.xml
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas      1043 Oct 13 08:49 memory_monitor_summary.json
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas    386271 Oct 13 08:49 log.46676269._096151.job.log.tgz.1
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas        95 Oct 13 08:50 pilot_heartbeat.json
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas      7826 Oct 13 08:50 heartbeat.json
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:51 boinc_mmap_file
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:51 wrapper_checkpoint.txt
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas      4894 Oct 13 08:51 pilotlog.txt
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas   1149411 Oct 13 08:51 log.46676269._096151.job.log.1
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas       357 Oct 13 08:51 output.list
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:51 runtime_log
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas   1556480 Oct 13 08:51 result.tar.gz
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 08:51 runtime_log.err
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas       653 Oct 13 08:51 0KvMDm3hOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWgVMDm9HnYGo.diag
[2025-10-13 08:51:07] -rw-r--r--. 1 boincer umatlas     20965 Oct 13 08:51 stderr.txt
[2025-10-13 08:51:07] HITS file was successfully produced:
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas 191834692 Oct 13 08:49 shared/HITS.pool.root.1
[2025-10-13 08:51:07]  *** Contents of shared directory: ***
[2025-10-13 08:51:07] total 404272
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas 219983135 Oct 13 06:24 ATLAS.root_0
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:24 start_atlas.sh
[2025-10-13 08:51:07] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 06:24 input.tar.gz
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas 191834692 Oct 13 08:49 HITS.pool.root.1
[2025-10-13 08:51:07] -rw-------. 1 boincer umatlas   1556480 Oct 13 08:51 result.tar.gz
08:51:08 (36599): run_atlas exited; CPU time 45363.440675
08:51:08 (36599): called boinc_finish(0)

</stderr_txt>
]]>

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