Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:34:13 (4101765): wrapper (7.7.26015): starting
19:34:13 (4101765): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:34:13] Arguments: --nthreads 4
[2025-10-13 19:34:13] Threads: 4
[2025-10-13 19:34:13] Checking for CVMFS
[2025-10-13 19:34:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:34:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:34:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:34:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:34:13] 2.9.2.0 1950177 6131 96168 151668 0 57 30403832 36864000 0 130560 0 5629847 99.992 207070 764 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:34:13] CVMFS is ok
[2025-10-13 19:34:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:34:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:34:13] Further information can be found at the LHC@home message board.
[2025-10-13 19:34:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:34:13] Checking for apptainer binary...
[2025-10-13 19:34:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:34:13] Running /usr/bin/apptainer --version
[2025-10-13 19:34:13] apptainer version 1.4.1-1.1
[2025-10-13 19:34:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:34:14] thA314a
[2025-10-13 19:34:14] apptainer works
[2025-10-13 19:34:14] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:34:14] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:34:14] Starting ATLAS job with PandaID=6842029292
[2025-10-13 19:34:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:43:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | INFO     | sufficient remaining disk space (230428770304 B)
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | INFO     | update_server=False
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:43:53] 2025-10-13 18:43:22,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:43:53] 2025-10-13 18:43:22,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:43:53] 2025-10-13 18:43:22,434 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:43:53] 2025-10-13 18:43:22,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:43:53] 2025-10-13 18:43:22,435 | INFO     | will abort loop
[2025-10-13 20:43:53] 2025-10-13 18:43:22,762 | INFO     | all payload control threads have been joined
[2025-10-13 20:43:53] 2025-10-13 18:43:22,883 | INFO     | all job control threads have been joined
[2025-10-13 20:43:53] 2025-10-13 18:43:23,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:43:53] 2025-10-13 18:43:23,379 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:23,379 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:23,440 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:23,452 | INFO     | all data control threads have been joined
[2025-10-13 20:43:53] 2025-10-13 18:43:23,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:43:53] 2025-10-13 18:43:23,561 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:23,768 | INFO     | [payload] control thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:23,889 | INFO     | [job] control thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,124 | INFO     | [job] validate thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,198 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,231 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,317 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,457 | INFO     | [data] control thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,571 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:24,811 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:25,147 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:26,811 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:43:53] 2025-10-13 18:43:27,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:32,815 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:43:53] 2025-10-13 18:43:33,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:43:53] 2025-10-13 18:43:35,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486910998336)>', '<ExcThread(monitor, started 140485679109888)>']
[2025-10-13 20:43:53] 2025-10-13 18:43:40,867 | INFO     | all workflow threads have been joined
[2025-10-13 20:43:53] 2025-10-13 18:43:40,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:43:53] 2025-10-13 18:43:40,867 | INFO     | traces error code: 0
[2025-10-13 20:43:53] 2025-10-13 18:43:40,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:43:53] 2025-10-13 18:43:53,397 | INFO     | PID=4105546 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:43:53] 2025-10-13 18:43:53,397 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:43:53] 2025-10-13 18:43:53,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:43:53] 2025-10-13 18:43:53,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:43:53] 2025-10-13 18:43:53,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:43:53] 2025-10-13 18:43:53,398 | INFO     | [monitor] control thread has ended
[2025-10-13 20:43:53] 2025-10-13 18:43:53,461 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:43:53] 2025-10-13 18:43:53,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:43:53] 2025-10-13 18:43:53,469 [wrapper] pilotpid: 4105546
[2025-10-13 20:43:53] 2025-10-13 18:43:53,472 [wrapper] Pilot exit status: 0
[2025-10-13 20:43:53] 2025-10-13 18:43:53,482 [wrapper] pandaids: 6842029292
[2025-10-13 20:43:53] 2025-10-13 18:43:53,502 [wrapper] cleanup supervisor_pilot 4121591 4105547
[2025-10-13 20:43:53] 2025-10-13 18:43:53,506 [wrapper] Test setup, not cleaning
[2025-10-13 20:43:53] 2025-10-13 18:43:53,509 [wrapper] apfmon messages muted
[2025-10-13 20:43:53] 2025-10-13 18:43:53,513 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:43:53] 2025-10-13 18:43:53,517 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:43:53]  *** Error codes and diagnostics ***
[2025-10-13 20:43:53]     "exeErrorCode": 0,
[2025-10-13 20:43:53]     "exeErrorDiag": "",
[2025-10-13 20:43:53]     "pilotErrorCode": 0,
[2025-10-13 20:43:53]     "pilotErrorDiag": "",
[2025-10-13 20:43:53]  *** Listing of results directory ***
[2025-10-13 20:43:53] total 403612
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 20:43:53] -rwx------ 1 boinc boinc     36292 Oct 13 05:20 runpilot2-wrapper.sh
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:20 queuedata.json
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:43:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:34 run_atlas
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:34 job.xml
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc 218820376 Oct 13 19:34 EVNT.46676267._004324.pool.root.1
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc    569685 Oct 13 19:34 input.tar.gz
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:34 start_atlas.sh
[2025-10-13 20:43:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:34 shared
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:34 boinc_setup_complete
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      6371 Oct 13 19:34 init_data.xml
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:34 boinc_lockfile
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:34 pandaJob.out
[2025-10-13 20:43:53] -rw------- 1 boinc boinc    972791 Oct 13 19:34 agis_schedconf.cvmfs.json
[2025-10-13 20:43:53] -rw------- 1 boinc boinc   1560580 Oct 13 19:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:43:53] drwx------ 5 boinc boinc      4096 Oct 13 19:34 pilot3
[2025-10-13 20:43:53] -rw------- 1 boinc boinc 188813642 Oct 13 20:42 HITS.46676269._095726.pool.root.1
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:42 boinc_task_state.xml
[2025-10-13 20:43:53] -rw------- 1 boinc boinc      1018 Oct 13 20:43 memory_monitor_summary.json
[2025-10-13 20:43:53] -rw------- 1 boinc boinc    270651 Oct 13 20:43 log.46676269._095726.job.log.tgz.1
[2025-10-13 20:43:53] -rw------- 1 boinc boinc      7765 Oct 13 20:43 heartbeat.json
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:43 boinc_mmap_file
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:43 wrapper_checkpoint.txt
[2025-10-13 20:43:53] -rw------- 1 boinc boinc       747 Oct 13 20:43 pilotlog.txt
[2025-10-13 20:43:53] -rw------- 1 boinc boinc        95 Oct 13 20:43 pilot_heartbeat.json
[2025-10-13 20:43:53] -rw------- 1 boinc boinc    617296 Oct 13 20:43 log.46676269._095726.job.log.1
[2025-10-13 20:43:53] -rw------- 1 boinc boinc       357 Oct 13 20:43 output.list
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:43 runtime_log
[2025-10-13 20:43:53] -rw------- 1 boinc boinc    911360 Oct 13 20:43 result.tar.gz
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      8782 Oct 13 20:43 runtime_log.err
[2025-10-13 20:43:53] -rw------- 1 boinc boinc       659 Oct 13 20:43 pGLLDmfHOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmscmNDmwUM5Ao.diag
[2025-10-13 20:43:53] -rw-r--r-- 1 boinc boinc      8076 Oct 13 20:43 stderr.txt
[2025-10-13 20:43:53] HITS file was successfully produced:
[2025-10-13 20:43:53] -rw------- 1 boinc boinc 188813642 Oct 13 20:42 shared/HITS.pool.root.1
[2025-10-13 20:43:53]  *** Contents of shared directory: ***
[2025-10-13 20:43:53] total 399560
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc 218820376 Oct 13 19:34 ATLAS.root_0
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc    569685 Oct 13 19:34 input.tar.gz
[2025-10-13 20:43:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:34 start_atlas.sh
[2025-10-13 20:43:53] -rw------- 1 boinc boinc 188813642 Oct 13 20:42 HITS.pool.root.1
[2025-10-13 20:43:53] -rw------- 1 boinc boinc    911360 Oct 13 20:43 result.tar.gz
20:43:54 (4101765): run_atlas exited; CPU time 15591.831533
20:43:54 (4101765): called boinc_finish(0)

</stderr_txt>
]]>

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