Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:08:28 (2548538): wrapper (7.7.26015): starting
04:08:28 (2548538): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 04:08:28] Arguments: --nthreads 12
[2025-10-13 04:08:28] Threads: 12
[2025-10-13 04:08:28] Checking for CVMFS
[2025-10-13 04:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:08:28] 2.13.2.0 3683012 13967 145796 151653 1 188 38409248 40960000 5645 16776704 0 162405699 99.874 55111855 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:08:28] CVMFS is ok
[2025-10-13 04:08:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:08:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:08:28] Further information can be found at the LHC@home message board.
[2025-10-13 04:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:08:28] Checking for apptainer binary...
[2025-10-13 04:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:08:28] Running /usr/bin/apptainer --version
[2025-10-13 04:08:28] apptainer version 1.4.3-1.el9
[2025-10-13 04:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:08:29] c8-7-4.aglt2.org
[2025-10-13 04:08:29] apptainer works
[2025-10-13 04:08:29] Set ATHENA_PROC_NUMBER=12
[2025-10-13 04:08:29] Set ATHENA_CORE_NUMBER=12
[2025-10-13 04:08:29] Starting ATLAS job with PandaID=6840970263
[2025-10-13 04:08:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:35:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:35:45]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6840970263/log.46676269._092683.job.log.tgz.1
[2025-10-13 04:35:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/c1/log.46676269._092683.job.log.tgz.1
[2025-10-13 04:35:45]  workdir=None
[2025-10-13 04:35:45] ]
[2025-10-13 04:35:45] 2025-10-13 08:34:54,270 | INFO     | monitor loop #120: job 0:6840970263 is in state 'stageout'
[2025-10-13 04:35:45] 2025-10-13 08:34:54,271 | WARNING  | aborting job monitor tasks since payload process 2558667 is not running
[2025-10-13 04:35:45] 2025-10-13 08:34:54,271 | INFO     | transferring file log.46676269._092683.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6840970263/log.46676269._092683.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 04:35:45] 2025-10-13 08:34:54,271 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6840970263/log.46676269._092683.job.log.tgz.1 /tmp/boinchome/slots/7/log.46676269._092683.job
[2025-10-13 04:35:45] 2025-10-13 08:34:54,290 | INFO     | adding to output.list: log.46676269._092683.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/c1/log.46676269._092683.job.log.tg
[2025-10-13 04:35:45] 2025-10-13 08:34:54,291 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:35:45] 2025-10-13 08:34:54,291 | INFO     | summary of transferred files:
[2025-10-13 04:35:45] 2025-10-13 08:34:54,291 | INFO     |  -- lfn=log.46676269._092683.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:35:45] 2025-10-13 08:34:54,291 | INFO     | stage-out finished correctly
[2025-10-13 04:35:45] 2025-10-13 08:34:55,796 | INFO     | time since job start (1578s) is within the limit (172800.0s)
[2025-10-13 04:35:45] 2025-10-13 08:34:55,907 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:35:45] 2025-10-13 08:34:56,771 | INFO     | monitor loop #121: job 0:6840970263 is in state 'finished'
[2025-10-13 04:35:45] 2025-10-13 08:34:56,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:35:45] 2025-10-13 08:34:57,801 | INFO     | time since job start (1580s) is within the limit (172800.0s)
[2025-10-13 04:35:45] 2025-10-13 08:34:58,335 | INFO     | job 6840970263 has state=finished
[2025-10-13 04:35:45] 2025-10-13 08:34:58,335 | INFO     | preparing for final server update for job 6840970263 in state='finished'
[2025-10-13 04:35:45] 2025-10-13 08:34:58,336 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:35:45] 2025-10-13 08:34:58,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:35:45] 2025-10-13 08:34:58,336 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:35:45] 2025-10-13 08:34:58,336 | INFO     | job 6840970263 has finished - writing final server update
[2025-10-13 04:35:45] 2025-10-13 08:34:58,336 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:35:45] 2025-10-13 08:34:58,337 | INFO     | executing command: lscpu
[2025-10-13 04:35:45] 2025-10-13 08:34:58,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:35:45] 2025-10-13 08:34:59,274 | INFO     | monitor loop #122: job 0:6840970263 is in state 'finished'
[2025-10-13 04:35:45] 2025-10-13 08:34:59,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:35:45] 2025-10-13 08:34:59,807 | INFO     | time since job start (1582s) is within the limit (172800.0s)
[2025-10-13 04:35:45] 2025-10-13 08:35:01,778 | INFO     | monitor loop #123: job 0:6840970263 is in state 'finished'
[2025-10-13 04:35:45] 2025-10-13 08:35:01,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:35:45] 2025-10-13 08:35:01,812 | INFO     | time since job start (1584s) is within the limit (172800.0s)
[2025-10-13 04:35:45] 2025-10-13 08:35:01,985 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 04:35:45] 2025-10-13 08:35:01,990 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3572.4319374999914
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6840970263/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | INFO     | extracted standard info from prmon json
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:35:45] 2025-10-13 08:35:02,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | sum of square deviations: 2120970.0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | sum of deviations: 79217284.00000003
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | mean x: 1760343796.0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | mean y: 2370486.4736842103
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | -- intersect: -65745685556.454834
[2025-10-13 04:35:45] 2025-10-13 08:35:02,005 | INFO     | intersect: -65745685556.454834
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | chi2: 0.00042258798972500436
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | -- intersect: -65745685556.454834
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | current memory leak: 37.35 B/s (using 19 data points, chi2=0.00)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | could have reported an average CPU frequency of 3570 MHz (4 samples)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | ..............................
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . Timing measurements:
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . get job = 0 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . initial setup = 2 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . payload setup = 4 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . stage-in = 0 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . payload execution = 1552 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . stage-out = 0 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,006 | INFO     | . log creation = 0 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,007 | INFO     | ..............................
[2025-10-13 04:35:45] 2025-10-13 08:35:02,063 | INFO     | 
[2025-10-13 04:35:45] 2025-10-13 08:35:02,063 | INFO     | job summary report
[2025-10-13 04:35:45] 2025-10-13 08:35:02,063 | INFO     | --------------------------------------------------
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | PanDA job id: 6840970263
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | task id: 46676269
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | errors: (none)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | pilot state: finished 
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | transexitcode: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | exeerrorcode: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | exeerrordiag: 
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | exitcode: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | exitmsg: OK
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | cpuconsumptiontime: 16660 s
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | nevents: 400
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | neventsw: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | pid: 2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | pgrp: 2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | corecount: 12
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | event service: False
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 1561: 2382985, 1563: 2382985, 1569: 2383179}
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | --------------------------------------------------
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | 
[2025-10-13 04:35:45] 2025-10-13 08:35:02,064 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 04:35:45] 2025-10-13 08:35:02,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | job 6840970263 has completed (purged errors)
[2025-10-13 04:35:45] 2025-10-13 08:35:02,083 | INFO     | overall cleanup function is called
[2025-10-13 04:35:45] 2025-10-13 08:35:03,090 | INFO     | --- collectZombieJob: --- 10, [2558667]
[2025-10-13 04:35:45] 2025-10-13 08:35:03,090 | INFO     | zombie collector waiting for pid 2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:03,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:35:45] 2025-10-13 08:35:03,091 | INFO     | collected zombie processes
[2025-10-13 04:35:45] 2025-10-13 08:35:03,091 | INFO     | will attempt to kill all subprocesses of pid=2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:03,437 | INFO     | process IDs to be killed: [2558667] (in reverse order)
[2025-10-13 04:35:45] 2025-10-13 08:35:03,557 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:35:45] 2025-10-13 08:35:03,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:35:45] 2025-10-13 08:35:03,576 | INFO     | did not find any defunct processes belonging to 2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:03,592 | INFO     | did not find any defunct processes belonging to 2558667
[2025-10-13 04:35:45] 2025-10-13 08:35:03,592 | INFO     | ready for new job
[2025-10-13 04:35:45] 2025-10-13 08:35:03,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:35:45] 2025-10-13 08:35:03,593 | INFO     | ***************************************
[2025-10-13 04:35:45] 2025-10-13 08:35:03,593 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:35:45] 2025-10-13 08:35:03,593 | INFO     | ***************************************
[2025-10-13 04:35:45] 2025-10-13 08:35:03,593 | INFO     | 
[2025-10-13 04:35:45] 2025-10-13 08:35:03,611 | INFO     | architecture information:
[2025-10-13 04:35:45] 2025-10-13 08:35:03,611 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:35:45] 2025-10-13 08:35:03,621 | INFO     | cat /etc/os-release:
[2025-10-13 04:35:45] NAME="CentOS Linux"
[2025-10-13 04:35:45] VERSION="7 (Core)"
[2025-10-13 04:35:45] ID="centos"
[2025-10-13 04:35:45] ID_LIKE="rhel fedora"
[2025-10-13 04:35:45] VERSION_ID="7"
[2025-10-13 04:35:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:35:45] ANSI_COLOR="0;31"
[2025-10-13 04:35:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:35:45] HOME_URL="https://www.centos.org/"
[2025-10-13 04:35:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:35:45] 
[2025-10-13 04:35:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:35:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:35:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:35:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:35:45] 
[2025-10-13 04:35:45] 2025-10-13 08:35:03,622 | INFO     | ***************************************
[2025-10-13 04:35:45] 2025-10-13 08:35:04,124 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 04:35:45] 2025-10-13 08:35:04,141 | INFO     | sufficient remaining disk space (167955660800 B)
[2025-10-13 04:35:45] 2025-10-13 08:35:04,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:35:45] 2025-10-13 08:35:04,141 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:35:45] 2025-10-13 08:35:04,141 | INFO     | update_server=False
[2025-10-13 04:35:45] 2025-10-13 08:35:04,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:35:45] 2025-10-13 08:35:04,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:35:45] 2025-10-13 08:35:04,281 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:35:45] 2025-10-13 08:35:04,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:35:45] 2025-10-13 08:35:04,281 | INFO     | will abort loop
[2025-10-13 04:35:45] 2025-10-13 08:35:04,426 | INFO     | all data control threads have been joined
[2025-10-13 04:35:45] 2025-10-13 08:35:04,466 | INFO     | all payload control threads have been joined
[2025-10-13 04:35:45] 2025-10-13 08:35:04,701 | INFO     | all job control threads have been joined
[2025-10-13 04:35:45] 2025-10-13 08:35:04,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:35:45] 2025-10-13 08:35:05,147 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,287 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,432 | INFO     | [data] control thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,455 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,471 | INFO     | [payload] control thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,702 | INFO     | [job] control thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,806 | INFO     | [job] validate thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:05,960 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:06,023 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:06,030 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:06,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:35:45] 2025-10-13 08:35:06,525 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:06,539 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:06,864 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:07,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:35:45] 2025-10-13 08:35:08,079 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:10,477 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:15,019 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:35:45] 2025-10-13 08:35:16,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:35:45] 2025-10-13 08:35:35,313 | INFO     | PID=2552251 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:35:45] 2025-10-13 08:35:35,313 | INFO     | .. there are 8 such processes running
[2025-10-13 04:35:45] 2025-10-13 08:35:35,314 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:35:45] 2025-10-13 08:35:35,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:35:45] 2025-10-13 08:35:35,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:35:45] 2025-10-13 08:35:39,399 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:35:45] 2025-10-13 08:35:40,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095325091648)>', '<ExcThread(monitor, started 140094820300544)>']
[2025-10-13 04:35:45] 2025-10-13 08:35:41,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:35:45] 2025-10-13 08:35:41,345 | INFO     | [monitor] control thread has ended
[2025-10-13 04:35:45] 2025-10-13 08:35:45,703 | INFO     | all workflow threads have been joined
[2025-10-13 04:35:45] 2025-10-13 08:35:45,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:35:45] 2025-10-13 08:35:45,704 | INFO     | traces error code: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:45,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:35:45] 2025-10-13 08:35:45,797 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:35:45] 2025-10-13 08:35:45,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:35:45] 2025-10-13 08:35:45,802 [wrapper] pilotpid: 2552251
[2025-10-13 04:35:45] 2025-10-13 08:35:45,804 [wrapper] Pilot exit status: 0
[2025-10-13 04:35:45] 2025-10-13 08:35:45,813 [wrapper] pandaids: 6840970263
[2025-10-13 04:35:45] 2025-10-13 08:35:45,901 [wrapper] cleanup supervisor_pilot 2600988 2552252
[2025-10-13 04:35:45] 2025-10-13 08:35:45,903 [wrapper] Test setup, not cleaning
[2025-10-13 04:35:45] 2025-10-13 08:35:45,907 [wrapper] apfmon messages muted
[2025-10-13 04:35:45] 2025-10-13 08:35:45,909 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:35:45] 2025-10-13 08:35:45,911 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:35:45]  *** Error codes and diagnostics ***
[2025-10-13 04:35:45]     "exeErrorCode": 0,
[2025-10-13 04:35:45]     "exeErrorDiag": "",
[2025-10-13 04:35:45]     "pilotErrorCode": 0,
[2025-10-13 04:35:45]     "pilotErrorDiag": "",
[2025-10-13 04:35:45]  *** Listing of results directory ***
[2025-10-13 04:35:45] total 414868
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:57 queuedata.json
[2025-10-13 04:35:45] -rwx------. 1 boincer umatlas     36292 Oct 12 19:58 runpilot2-wrapper.sh
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:35:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:08 run_atlas
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:08 job.xml
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas 223160393 Oct 13 04:08 EVNT.46676267._004676.pool.root.1
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 04:35:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:08 shared
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:08 input.tar.gz
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:08 boinc_lockfile
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:08 pandaJob.out
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas    972849 Oct 13 04:08 agis_schedconf.cvmfs.json
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:35:45] drwx------. 5 boincer umatlas      4096 Oct 13 04:08 pilot3
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas      7164 Oct 13 04:30 init_data.xml
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas 196536578 Oct 13 04:34 HITS.46676269._092683.pool.root.1
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas       529 Oct 13 04:34 boinc_task_state.xml
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas      1029 Oct 13 04:34 memory_monitor_summary.json
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas    342665 Oct 13 04:34 log.46676269._092683.job.log.tgz.1
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas      7768 Oct 13 04:35 heartbeat.json
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas        95 Oct 13 04:35 pilot_heartbeat.json
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:35 boinc_mmap_file
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:35 wrapper_checkpoint.txt
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas      5082 Oct 13 04:35 pilotlog.txt
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas    268001 Oct 13 04:35 log.46676269._092683.job.log.1
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas       357 Oct 13 04:35 output.list
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:35 runtime_log
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas    634880 Oct 13 04:35 result.tar.gz
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 04:35 runtime_log.err
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas       648 Oct 13 04:35 DrPNDmq8KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX7lNDmRZFuHn.diag
[2025-10-13 04:35:45] -rw-r--r--. 1 boincer umatlas     22234 Oct 13 04:35 stderr.txt
[2025-10-13 04:35:45] HITS file was successfully produced:
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas 196536578 Oct 13 04:34 shared/HITS.pool.root.1
[2025-10-13 04:35:45]  *** Contents of shared directory: ***
[2025-10-13 04:35:45] total 411068
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas 223160393 Oct 13 04:08 ATLAS.root_0
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 04:35:45] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:08 input.tar.gz
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas 196536578 Oct 13 04:34 HITS.pool.root.1
[2025-10-13 04:35:45] -rw-------. 1 boincer umatlas    634880 Oct 13 04:35 result.tar.gz
04:35:47 (2548538): run_atlas exited; CPU time 16682.697857
04:35:47 (2548538): called boinc_finish(0)

</stderr_txt>
]]>

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