Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:20 (3043518): wrapper (7.7.26015): starting
00:10:20 (3043518): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 00:10:20] Arguments: --nthreads 6
[2025-10-14 00:10:20] Threads: 6
[2025-10-14 00:10:20] Checking for CVMFS
[2025-10-14 00:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 00:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 00:10:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 00:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 00:10:20] 2.11.5.0 3385007 6011 98512 151664 1 188 13703384 20971520 929 130560 0 11961037 99.996 203093 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-14 00:10:20] CVMFS is ok
[2025-10-14 00:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 00:10:21] Checking for apptainer binary...
[2025-10-14 00:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 00:10:21] Running /usr/bin/apptainer --version
[2025-10-14 00:10:21] apptainer version 1.3.6-1.el9
[2025-10-14 00:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 00:10:21] testio006
[2025-10-14 00:10:21] apptainer works
[2025-10-14 00:10:21] Set ATHENA_PROC_NUMBER=6
[2025-10-14 00:10:21] Set ATHENA_CORE_NUMBER=6
[2025-10-14 00:10:21] Starting ATLAS job with PandaID=6841068968
[2025-10-14 00:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 01:28:42]  *** The last 200 lines of the pilot log: ***
[2025-10-14 01:28:42] 2025-10-13 16:27:31,938 | INFO     | time since job start (4621s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:33,943 | INFO     | time since job start (4623s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:34,009 | INFO     | monitor loop #352: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:34,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:35,949 | INFO     | time since job start (4625s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:36,512 | INFO     | monitor loop #353: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:36,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:37,950 | INFO     | time since job start (4627s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:39,015 | INFO     | monitor loop #354: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:39,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:39,955 | INFO     | time since job start (4629s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:41,518 | INFO     | monitor loop #355: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:41,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:41,960 | INFO     | time since job start (4631s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:43,048 | INFO     | PID=3047314 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 01:28:42] 2025-10-13 16:27:43,048 | INFO     | .. there are 2 such processes running
[2025-10-14 01:28:42] 2025-10-13 16:27:44,021 | INFO     | monitor loop #356: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:44,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:44,048 | INFO     | time since job start (4634s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:46,050 | INFO     | time since job start (4636s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:46,524 | INFO     | monitor loop #357: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:46,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:48,055 | INFO     | time since job start (4638s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:49,027 | INFO     | monitor loop #358: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:49,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:50,061 | INFO     | time since job start (4640s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:51,528 | INFO     | monitor loop #359: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:51,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:52,066 | INFO     | time since job start (4642s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:54,031 | INFO     | monitor loop #360: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:54,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:54,072 | INFO     | time since job start (4644s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,077 | INFO     | time since job start (4646s) is within the limit (172800.0s)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,534 | INFO     | monitor loop #361: job 0:6841068968 is in state 'finished'
[2025-10-14 01:28:42] 2025-10-13 16:27:56,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,569 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 01:28:42] 2025-10-13 16:27:56,571 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3992.9424374999994
[2025-10-14 01:28:42] 2025-10-13 16:27:56,573 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6841068968/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,573 | INFO     | extracted standard info from prmon json
[2025-10-14 01:28:42] 2025-10-13 16:27:56,574 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 01:28:42] 2025-10-13 16:27:56,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 01:28:42] 2025-10-13 16:27:56,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 01:28:42] 2025-10-13 16:27:56,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | fitting pss+swap vs Time
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | sum of square deviations: 97479037.0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | sum of deviations: -998720334.5000002
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | mean x: 1760370600.5
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | mean y: 2583561.661764706
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | -- intersect: 18038439978.414494
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | intersect: 18038439978.414494
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | chi2: 0.054344671920539475
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | -- intersect: 18038439978.414494
[2025-10-14 01:28:42] 2025-10-13 16:27:56,575 | INFO     | current memory leak: -10.25 B/s (using 68 data points, chi2=0.05)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | could have reported an average CPU frequency of 3980 MHz (6 samples)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | ..............................
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . Timing measurements:
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . get job = 0 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . initial setup = 4 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . payload setup = 3 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . stage-in = 0 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . payload execution = 4561 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . stage-out = 0 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | . log creation = 0 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,576 | INFO     | ..............................
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | 
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | job summary report
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | --------------------------------------------------
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | PanDA job id: 6841068968
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | task id: 46676269
[2025-10-14 01:28:42] 2025-10-13 16:27:56,627 | INFO     | errors: (none)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | pilot state: finished 
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | transexitcode: 0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | exeerrorcode: 0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | exeerrordiag: 
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | exitcode: 0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | exitmsg: OK
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | cpuconsumptiontime: 24780 s
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | nevents: 400
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | neventsw: 0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | pid: 3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | pgrp: 3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | corecount: 6
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | event service: False
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | sizes: {0: 2348627, 1: 2348882, 4: 2349144, 11: 2349172, 4569: 2375396, 4570: 2384394, 4572: 2384578, 4632: 2384772}
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | --------------------------------------------------
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | 
[2025-10-14 01:28:42] 2025-10-13 16:27:56,628 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 01:28:42] 2025-10-13 16:27:56,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | job 6841068968 has completed (purged errors)
[2025-10-14 01:28:42] 2025-10-13 16:27:56,643 | INFO     | overall cleanup function is called
[2025-10-14 01:28:42] 2025-10-13 16:27:57,650 | INFO     | --- collectZombieJob: --- 10, [3054067]
[2025-10-14 01:28:42] 2025-10-13 16:27:57,650 | INFO     | zombie collector waiting for pid 3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:57,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 01:28:42] 2025-10-13 16:27:57,651 | INFO     | collected zombie processes
[2025-10-14 01:28:42] 2025-10-13 16:27:57,651 | INFO     | will attempt to kill all subprocesses of pid=3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:57,728 | INFO     | process IDs to be killed: [3054067] (in reverse order)
[2025-10-14 01:28:42] 2025-10-13 16:27:57,759 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 01:28:42] 2025-10-13 16:27:57,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 01:28:42] 2025-10-13 16:27:57,761 | INFO     | did not find any defunct processes belonging to 3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:57,764 | INFO     | did not find any defunct processes belonging to 3054067
[2025-10-14 01:28:42] 2025-10-13 16:27:57,764 | INFO     | ready for new job
[2025-10-14 01:28:42] 2025-10-13 16:27:57,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 01:28:42] 2025-10-13 16:27:57,765 | INFO     | ***************************************
[2025-10-14 01:28:42] 2025-10-13 16:27:57,765 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 01:28:42] 2025-10-13 16:27:57,765 | INFO     | ***************************************
[2025-10-14 01:28:42] 2025-10-13 16:27:57,765 | INFO     | 
[2025-10-14 01:28:42] 2025-10-13 16:27:57,765 | INFO     | architecture information:
[2025-10-14 01:28:42] 2025-10-13 16:27:57,766 | INFO     | executing command: cat /etc/os-release
[2025-10-14 01:28:42] 2025-10-13 16:27:57,776 | INFO     | cat /etc/os-release:
[2025-10-14 01:28:42] NAME="CentOS Linux"
[2025-10-14 01:28:42] VERSION="7 (Core)"
[2025-10-14 01:28:42] ID="centos"
[2025-10-14 01:28:42] ID_LIKE="rhel fedora"
[2025-10-14 01:28:42] VERSION_ID="7"
[2025-10-14 01:28:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 01:28:42] ANSI_COLOR="0;31"
[2025-10-14 01:28:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 01:28:42] HOME_URL="https://www.centos.org/"
[2025-10-14 01:28:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 01:28:42] 
[2025-10-14 01:28:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 01:28:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 01:28:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 01:28:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 01:28:42] 
[2025-10-14 01:28:42] 2025-10-13 16:27:57,776 | INFO     | ***************************************
[2025-10-14 01:28:42] 2025-10-13 16:27:58,279 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 01:28:42] 2025-10-13 16:27:58,289 | INFO     | sufficient remaining disk space (85517664256 B)
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | INFO     | update_server=False
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:28:42] 2025-10-13 16:27:58,290 | INFO     | aborting loop
[2025-10-14 01:28:42] 2025-10-13 16:27:58,594 | INFO     | all job control threads have been joined
[2025-10-14 01:28:42] 2025-10-13 16:27:58,694 | INFO     | all data control threads have been joined
[2025-10-14 01:28:42] 2025-10-13 16:27:58,754 | INFO     | all payload control threads have been joined
[2025-10-14 01:28:42] 2025-10-13 16:27:59,295 | INFO     | [job] retrieve thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,295 | INFO     | [job] queue monitor thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,295 | INFO     | [job] job monitor thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,599 | INFO     | [job] control thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,602 | INFO     | [payload] failed_post thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,700 | INFO     | [data] control thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 01:28:42] 2025-10-13 16:27:59,760 | INFO     | [payload] control thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:27:59,819 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,028 | INFO     | [payload] validate_post thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,126 | INFO     | [job] validate thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,378 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,378 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,452 | INFO     | [data] copytool_in thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:00,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 01:28:42] 2025-10-13 16:28:01,715 | INFO     | [data] copytool_out thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:04,969 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:08,394 | INFO     | job.realtimelogging is not enabled
[2025-10-14 01:28:42] 2025-10-13 16:28:09,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 01:28:42] 2025-10-13 16:28:29,244 | INFO     | PID=3047314 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 01:28:42] 2025-10-13 16:28:29,244 | INFO     | .. there are 2 such processes running
[2025-10-14 01:28:42] 2025-10-13 16:28:29,244 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 01:28:42] 2025-10-13 16:28:29,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 01:28:42] 2025-10-13 16:28:29,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 01:28:42] 2025-10-13 16:28:36,708 | INFO     | [monitor] cgroup control has ended
[2025-10-14 01:28:42] 2025-10-13 16:28:36,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493379913536)>', '<ExcThread(monitor, started 140492675217152)>']
[2025-10-14 01:28:42] 2025-10-13 16:28:37,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 01:28:42] 2025-10-13 16:28:37,285 | INFO     | [monitor] control thread has ended
[2025-10-14 01:28:42] 2025-10-13 16:28:41,914 | INFO     | all workflow threads have been joined
[2025-10-14 01:28:42] 2025-10-13 16:28:41,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 01:28:42] 2025-10-13 16:28:41,914 | INFO     | traces error code: 0
[2025-10-14 01:28:42] 2025-10-13 16:28:41,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 01:28:42] 2025-10-13 16:28:41,996 [wrapper] ==== pilot stdout END ====
[2025-10-14 01:28:42] 2025-10-13 16:28:41,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 01:28:42] 2025-10-13 16:28:42,000 [wrapper] pilotpid: 3047314
[2025-10-14 01:28:42] 2025-10-13 16:28:42,002 [wrapper] Pilot exit status: 0
[2025-10-14 01:28:42] 2025-10-13 16:28:42,009 [wrapper] pandaids: 6841068968
[2025-10-14 01:28:42] 2025-10-13 16:28:42,028 [wrapper] cleanup supervisor_pilot 3090579 3047315
[2025-10-14 01:28:42] 2025-10-13 16:28:42,030 [wrapper] Test setup, not cleaning
[2025-10-14 01:28:42] 2025-10-13 16:28:42,032 [wrapper] apfmon messages muted
[2025-10-14 01:28:42] 2025-10-13 16:28:42,033 [wrapper] ==== wrapper stdout END ====
[2025-10-14 01:28:42] 2025-10-13 16:28:42,035 [wrapper] ==== wrapper stderr END ====
[2025-10-14 01:28:42]  *** Error codes and diagnostics ***
[2025-10-14 01:28:42]     "exeErrorCode": 0,
[2025-10-14 01:28:42]     "exeErrorDiag": "",
[2025-10-14 01:28:42]     "pilotErrorCode": 0,
[2025-10-14 01:28:42]     "pilotErrorDiag": "",
[2025-10-14 01:28:42]  *** Listing of results directory ***
[2025-10-14 01:28:42] total 406516
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc    557409 Oct 13 09:11 pilot3.tar.gz
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc      5112 Oct 13 09:29 queuedata.json
[2025-10-14 01:28:42] -rwx------. 1 boinc boinc     36292 Oct 13 09:30 runpilot2-wrapper.sh
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc       100 Oct 14 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 01:28:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 00:10 run_atlas
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc       105 Oct 14 00:10 job.xml
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc 218419622 Oct 14 00:10 EVNT.46676267._004694.pool.root.1
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc     15120 Oct 14 00:10 start_atlas.sh
[2025-10-14 01:28:42] drwxrwx--x. 2 boinc boinc        68 Oct 14 00:10 shared
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc    569680 Oct 14 00:10 input.tar.gz
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc      9465 Oct 14 00:10 init_data.xml
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc         0 Oct 14 00:10 boinc_lockfile
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc      2548 Oct 14 00:10 pandaJob.out
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc    972791 Oct 14 00:10 agis_schedconf.cvmfs.json
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc   1560580 Oct 14 00:10 agis_ddmendpoints.agis.ALL.json
[2025-10-14 01:28:42] drwx------. 5 boinc boinc      4096 Oct 14 00:10 pilot3
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc 192032652 Oct 14 01:26 HITS.46676269._093177.pool.root.1
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc       530 Oct 14 01:26 boinc_task_state.xml
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc      1015 Oct 14 01:26 memory_monitor_summary.json
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc    278666 Oct 14 01:26 log.46676269._093177.job.log.tgz.1
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc      7750 Oct 14 01:27 heartbeat.json
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc        27 Oct 14 01:28 wrapper_checkpoint.txt
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc      8192 Oct 14 01:28 boinc_mmap_file
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc        95 Oct 14 01:28 pilot_heartbeat.json
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc      4895 Oct 14 01:28 pilotlog.txt
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc    686151 Oct 14 01:28 log.46676269._093177.job.log.1
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc       357 Oct 14 01:28 output.list
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc       620 Oct 14 01:28 runtime_log
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc    983040 Oct 14 01:28 result.tar.gz
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc      8661 Oct 14 01:28 runtime_log.err
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc       641 Oct 14 01:28 dvRKDmedLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJOVMDmzkbS9n.diag
[2025-10-14 01:28:42] -rw-r--r--. 1 boinc boinc     21955 Oct 14 01:28 stderr.txt
[2025-10-14 01:28:42] HITS file was successfully produced:
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc 192032652 Oct 14 01:26 shared/HITS.pool.root.1
[2025-10-14 01:28:42]  *** Contents of shared directory: ***
[2025-10-14 01:28:42] total 402372
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc 218419622 Oct 14 00:10 ATLAS.root_0
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc     15120 Oct 14 00:10 start_atlas.sh
[2025-10-14 01:28:42] -rw-r--r--. 2 boinc boinc    569680 Oct 14 00:10 input.tar.gz
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc 192032652 Oct 14 01:26 HITS.pool.root.1
[2025-10-14 01:28:42] -rw-------. 1 boinc boinc    983040 Oct 14 01:28 result.tar.gz
01:28:43 (3043518): run_atlas exited; CPU time 24815.664327
01:28:43 (3043518): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN