Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:13:18 (72108): wrapper (7.7.26015): starting
04:13:18 (72108): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 04:13:18] Arguments: --nthreads 9
[2025-10-13 04:13:18] Threads: 9
[2025-10-13 04:13:18] Checking for CVMFS
[2025-10-13 04:13:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:13:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:13:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:13:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:13:19] 2.13.2.0 929169 19779 215036 151653 3 614 26414409 32935937 23915 16776704 0 59312322 99.655 53635564 31444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:13:19] CVMFS is ok
[2025-10-13 04:13:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:13:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:13:19] Further information can be found at the LHC@home message board.
[2025-10-13 04:13:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:13:19] Checking for apptainer binary...
[2025-10-13 04:13:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:13:19] Running /usr/bin/apptainer --version
[2025-10-13 04:13:19] apptainer version 1.4.3-1.el9
[2025-10-13 04:13:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:13:19] c6-4-5-2.aglt2.org
[2025-10-13 04:13:19] apptainer works
[2025-10-13 04:13:19] Set ATHENA_PROC_NUMBER=9
[2025-10-13 04:13:19] Set ATHENA_CORE_NUMBER=9
[2025-10-13 04:13:19] Starting ATLAS job with PandaID=6840969851
[2025-10-13 04:13:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:29:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:29:13] 2025-10-13 10:28:37,883 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:29:13] 2025-10-13 10:28:37,884 | INFO     | sum of square deviations: 697020050.9007659
[2025-10-13 06:29:13] 2025-10-13 10:28:37,884 | INFO     | sum of deviations: 11741304322.740463
[2025-10-13 06:29:13] 2025-10-13 10:28:37,884 | INFO     | mean x: 1760347303.091603
[2025-10-13 06:29:13] 2025-10-13 10:28:37,885 | INFO     | mean y: 2199774.854961832
[2025-10-13 06:29:13] 2025-10-13 10:28:37,885 | INFO     | -- intersect: -29650854498.983353
[2025-10-13 06:29:13] 2025-10-13 10:28:37,885 | INFO     | intersect: -29650854498.983353
[2025-10-13 06:29:13] 2025-10-13 10:28:37,885 | INFO     | chi2: 2.0094722399443703
[2025-10-13 06:29:13] 2025-10-13 10:28:37,885 | INFO     | sum of square deviations: 620205098.5396805
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | sum of deviations: 12764865749.444443
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | mean x: 1760347150.5873015
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | mean y: 2201809.777777778
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | -- intersect: -36228708098.20696
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | intersect: -36228708098.20696
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | chi2: 2.002995520265514
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | current chi2=2.002995520265514 (change=0.3223094875416399 %)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,886 | INFO     | right removable region: 125
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | sum of square deviations: 620205648.3571442
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | sum of deviations: -10377793088.595238
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | mean x: 1760347455.5952382
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | mean y: 2243241.3412698414
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | -- intersect: 29457830604.32927
[2025-10-13 06:29:13] 2025-10-13 10:28:37,887 | INFO     | intersect: 29457830604.32927
[2025-10-13 06:29:13] 2025-10-13 10:28:37,888 | INFO     | chi2: 0.21574549112268027
[2025-10-13 06:29:13] 2025-10-13 10:28:37,888 | INFO     | current chi2=0.21574549112268027 (change=89.2635744433746 %)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,888 | INFO     | sum of square deviations: 549251820.8099151
[2025-10-13 06:29:13] 2025-10-13 10:28:37,888 | INFO     | sum of deviations: -13882034609.413218
[2025-10-13 06:29:13] 2025-10-13 10:28:37,888 | INFO     | mean x: 1760347608.0991735
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | mean y: 2250590.867768595
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | -- intersect: 44494058345.27068
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | intersect: 44494058345.27068
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | chi2: 0.10972446864598175
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | current chi2=0.10972446864598175 (change=49.14170948602182 %)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,889 | INFO     | sum of square deviations: 483948022.3017241
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | sum of deviations: -13215013305.043102
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | mean x: 1760347760.5775862
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | mean y: 2249019.0603448274
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | -- intersect: 48071500272.31163
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | intersect: 48071500272.31163
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | chi2: 0.10587577816297081
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | current chi2=0.10587577816297081 (change=3.507595462073703 %)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | left removable region: 30
[2025-10-13 06:29:13] 2025-10-13 10:28:37,890 | INFO     | sum of square deviations: 265826778.90526336
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | sum of deviations: -10251586665.210524
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | mean x: 1760348035.031579
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | mean y: 2250549.736842105
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | -- intersect: 67889919792.009575
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | intersect: 67889919792.009575
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | chi2: 0.07737462146414578
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | -- intersect: 67889919792.009575
[2025-10-13 06:29:13] 2025-10-13 10:28:37,891 | INFO     | current memory leak: -38.56 B/s (using 95 data points, chi2=0.08)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | could have reported an average CPU frequency of 2934 MHz (8 samples)
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | ..............................
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . Timing measurements:
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . get job = 0 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . initial setup = 5 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . payload setup = 30 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . stage-in = 0 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,892 | INFO     | . payload execution = 7988 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,893 | INFO     | . stage-out = 1 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,893 | INFO     | . log creation = 0 s
[2025-10-13 06:29:13] 2025-10-13 10:28:37,893 | INFO     | ..............................
[2025-10-13 06:29:13] 2025-10-13 10:28:38,011 | INFO     | 
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | job summary report
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | --------------------------------------------------
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | PanDA job id: 6840969851
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | task id: 46676269
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | errors: (none)
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | pilot state: finished 
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | transexitcode: 0
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | exeerrorcode: 0
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | exeerrordiag: 
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | exitcode: 0
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | exitmsg: OK
[2025-10-13 06:29:13] 2025-10-13 10:28:38,012 | INFO     | cpuconsumptiontime: 39123 s
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | nevents: 400
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | neventsw: 0
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | pid: 99649
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | pgrp: 99649
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | corecount: 9
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | event service: False
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 29: 2349203, 34: 2349231, 8022: 2377091, 8023: 2386089, 8027: 2386145, 8036: 2386339}
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | --------------------------------------------------
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | 
[2025-10-13 06:29:13] 2025-10-13 10:28:38,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 06:29:13] 2025-10-13 10:28:38,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,034 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,034 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:29:13] 2025-10-13 10:28:38,035 | INFO     | job 6840969851 has completed (purged errors)
[2025-10-13 06:29:13] 2025-10-13 10:28:38,036 | INFO     | overall cleanup function is called
[2025-10-13 06:29:13] 2025-10-13 10:28:39,046 | INFO     | --- collectZombieJob: --- 10, [99649]
[2025-10-13 06:29:13] 2025-10-13 10:28:39,046 | INFO     | zombie collector waiting for pid 99649
[2025-10-13 06:29:13] 2025-10-13 10:28:39,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:29:13] 2025-10-13 10:28:39,046 | INFO     | collected zombie processes
[2025-10-13 06:29:13] 2025-10-13 10:28:39,046 | INFO     | will attempt to kill all subprocesses of pid=99649
[2025-10-13 06:29:13] 2025-10-13 10:28:40,008 | INFO     | PID=83385 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 06:29:13] 2025-10-13 10:28:40,073 | INFO     | .. there are 30 such processes running
[2025-10-13 06:29:13] 2025-10-13 10:28:40,332 | INFO     | process IDs to be killed: [99649] (in reverse order)
[2025-10-13 06:29:13] 2025-10-13 10:28:40,462 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:29:13] 2025-10-13 10:28:40,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:29:13] 2025-10-13 10:28:40,475 | INFO     | did not find any defunct processes belonging to 99649
[2025-10-13 06:29:13] 2025-10-13 10:28:40,489 | INFO     | did not find any defunct processes belonging to 99649
[2025-10-13 06:29:13] 2025-10-13 10:28:40,490 | INFO     | ready for new job
[2025-10-13 06:29:13] 2025-10-13 10:28:40,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:29:13] 2025-10-13 10:28:40,493 | INFO     | ***************************************
[2025-10-13 06:29:13] 2025-10-13 10:28:40,493 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:29:13] 2025-10-13 10:28:40,493 | INFO     | ***************************************
[2025-10-13 06:29:13] 2025-10-13 10:28:40,493 | INFO     | 
[2025-10-13 06:29:13] 2025-10-13 10:28:40,515 | INFO     | architecture information:
[2025-10-13 06:29:13] 2025-10-13 10:28:40,521 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:29:13] 2025-10-13 10:28:40,539 | INFO     | cat /etc/os-release:
[2025-10-13 06:29:13] NAME="CentOS Linux"
[2025-10-13 06:29:13] VERSION="7 (Core)"
[2025-10-13 06:29:13] ID="centos"
[2025-10-13 06:29:13] ID_LIKE="rhel fedora"
[2025-10-13 06:29:13] VERSION_ID="7"
[2025-10-13 06:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:29:13] ANSI_COLOR="0;31"
[2025-10-13 06:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:29:13] HOME_URL="https://www.centos.org/"
[2025-10-13 06:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:29:13] 
[2025-10-13 06:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:29:13] 
[2025-10-13 06:29:13] 2025-10-13 10:28:40,539 | INFO     | ***************************************
[2025-10-13 06:29:13] 2025-10-13 10:28:41,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 06:29:13] 2025-10-13 10:28:41,154 | INFO     | sufficient remaining disk space (75377934336 B)
[2025-10-13 06:29:13] 2025-10-13 10:28:41,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:29:13] 2025-10-13 10:28:41,154 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:29:13] 2025-10-13 10:28:41,155 | INFO     | update_server=False
[2025-10-13 06:29:13] 2025-10-13 10:28:41,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:29:13] 2025-10-13 10:28:41,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:29:13] 2025-10-13 10:28:41,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:29:13] 2025-10-13 10:28:41,178 | INFO     | aborting loop
[2025-10-13 06:29:13] 2025-10-13 10:28:41,592 | INFO     | all payload control threads have been joined
[2025-10-13 06:29:13] 2025-10-13 10:28:41,705 | INFO     | all job control threads have been joined
[2025-10-13 06:29:13] 2025-10-13 10:28:41,810 | INFO     | all data control threads have been joined
[2025-10-13 06:29:13] 2025-10-13 10:28:42,161 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,184 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,457 | INFO     | [job] validate thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,608 | INFO     | [payload] control thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,623 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,720 | INFO     | [job] control thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,779 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,816 | INFO     | [data] control thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:42,998 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:43,030 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:43,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:29:13] 2025-10-13 10:28:43,164 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:43,224 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:43,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:29:13] 2025-10-13 10:28:44,108 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:48,007 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:51,534 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:29:13] 2025-10-13 10:28:52,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:29:13] 2025-10-13 10:28:52,752 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:29:13] 2025-10-13 10:28:54,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777872648000)>', '<ExcThread(monitor, started 139777143723776)>']
[2025-10-13 06:29:13] 2025-10-13 10:28:59,712 | INFO     | all workflow threads have been joined
[2025-10-13 06:29:13] 2025-10-13 10:28:59,712 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:29:13] 2025-10-13 10:28:59,712 | INFO     | traces error code: 0
[2025-10-13 06:29:13] 2025-10-13 10:28:59,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | INFO     | PID=83385 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | INFO     | .. there are 30 such processes running
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:29:13] 2025-10-13 10:29:12,763 | INFO     | [monitor] control thread has ended
[2025-10-13 06:29:13] 2025-10-13 10:29:13,123 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:29:13] 2025-10-13 10:29:13,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:29:13] 2025-10-13 10:29:13,127 [wrapper] pilotpid: 83385
[2025-10-13 06:29:13] 2025-10-13 10:29:13,129 [wrapper] Pilot exit status: 0
[2025-10-13 06:29:13] 2025-10-13 10:29:13,201 [wrapper] pandaids: 6840969851
[2025-10-13 06:29:13] 2025-10-13 10:29:13,269 [wrapper] cleanup supervisor_pilot  559022 83387
[2025-10-13 06:29:13] 2025-10-13 10:29:13,273 [wrapper] Test setup, not cleaning
[2025-10-13 06:29:13] 2025-10-13 10:29:13,276 [wrapper] apfmon messages muted
[2025-10-13 06:29:13] 2025-10-13 10:29:13,278 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:29:13] 2025-10-13 10:29:13,281 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:29:13]  *** Error codes and diagnostics ***
[2025-10-13 06:29:13]     "exeErrorCode": 0,
[2025-10-13 06:29:13]     "exeErrorDiag": "",
[2025-10-13 06:29:13]     "pilotErrorCode": 0,
[2025-10-13 06:29:13]     "pilotErrorDiag": "",
[2025-10-13 06:29:13]  *** Listing of results directory ***
[2025-10-13 06:29:13] total 409340
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:53 queuedata.json
[2025-10-13 06:29:13] -rwx------. 1 boincer umatlas     36292 Oct 12 19:54 runpilot2-wrapper.sh
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:29:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:13 run_atlas
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:13 job.xml
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas 221678238 Oct 13 04:13 EVNT.46676267._004670.pool.root.1
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:13 start_atlas.sh
[2025-10-13 06:29:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:13 shared
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 04:13 input.tar.gz
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:13 boinc_lockfile
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:13 pandaJob.out
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas    972849 Oct 13 04:13 agis_schedconf.cvmfs.json
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:29:13] drwx------. 5 boincer umatlas      4096 Oct 13 04:13 pilot3
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas 190678832 Oct 13 06:27 HITS.46676269._092535.pool.root.1
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas       530 Oct 13 06:27 boinc_task_state.xml
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas      1041 Oct 13 06:28 memory_monitor_summary.json
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas        95 Oct 13 06:28 pilot_heartbeat.json
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas    393768 Oct 13 06:28 log.46676269._092535.job.log.tgz.1
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 06:28 init_data.xml
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas      7825 Oct 13 06:28 heartbeat.json
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:29 boinc_mmap_file
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:29 wrapper_checkpoint.txt
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas       821 Oct 13 06:29 pilotlog.txt
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas   1057313 Oct 13 06:29 log.46676269._092535.job.log.1
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas       357 Oct 13 06:29 output.list
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:29 runtime_log
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas   1474560 Oct 13 06:29 result.tar.gz
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 06:29 runtime_log.err
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas       652 Oct 13 06:29 RK9NDmn4KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme6lNDmXrROGm.diag
[2025-10-13 06:29:13] -rw-r--r--. 1 boincer umatlas     21100 Oct 13 06:29 stderr.txt
[2025-10-13 06:29:13] HITS file was successfully produced:
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas 190678832 Oct 13 06:27 shared/HITS.pool.root.1
[2025-10-13 06:29:13]  *** Contents of shared directory: ***
[2025-10-13 06:29:13] total 404720
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas 221678238 Oct 13 04:13 ATLAS.root_0
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:13 start_atlas.sh
[2025-10-13 06:29:13] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 04:13 input.tar.gz
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas 190678832 Oct 13 06:27 HITS.pool.root.1
[2025-10-13 06:29:13] -rw-------. 1 boincer umatlas   1474560 Oct 13 06:29 result.tar.gz
06:29:35 (72108): run_atlas exited; CPU time 39343.083228
06:29:35 (72108): called boinc_finish(0)

</stderr_txt>
]]>

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