Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:15:07 (3155029): wrapper (7.7.26015): starting
04:15:07 (3155029): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:15:07] Arguments: --nthreads 8
[2025-10-13 04:15:07] Threads: 8
[2025-10-13 04:15:07] Checking for CVMFS
[2025-10-13 04:15:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:15:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:15:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:15:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:15:07] 2.13.2.0 4298 25537 223000 151653 0 188 25183519 32935936 3664 16776704 0 74448221 99.740 51620080 29840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:15:07] CVMFS is ok
[2025-10-13 04:15:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:15:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:15:07] Further information can be found at the LHC@home message board.
[2025-10-13 04:15:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:15:07] Checking for apptainer binary...
[2025-10-13 04:15:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:15:07] Running /usr/bin/apptainer --version
[2025-10-13 04:15:07] apptainer version 1.4.3-1.el9
[2025-10-13 04:15:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:15:08] c-8-24.aglt2.org
[2025-10-13 04:15:08] apptainer works
[2025-10-13 04:15:08] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:15:08] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:15:08] Starting ATLAS job with PandaID=6840970388
[2025-10-13 04:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:50:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:50:34]  status=None
[2025-10-13 05:50:34]  status_code=0
[2025-10-13 05:50:34]  storage_token=
[2025-10-13 05:50:34]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6840970388/log.46676269._092725.job.log.tgz.1
[2025-10-13 05:50:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/ef/log.46676269._092725.job.log.tgz.1
[2025-10-13 05:50:34]  workdir=None
[2025-10-13 05:50:34] ]
[2025-10-13 05:50:34] 2025-10-13 09:49:50,070 | INFO     | transferring file log.46676269._092725.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6840970388/log.46676269._092725.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 05:50:34] 2025-10-13 09:49:50,070 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6840970388/log.46676269._092725.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._092725.job
[2025-10-13 05:50:34] 2025-10-13 09:49:50,086 | INFO     | adding to output.list: log.46676269._092725.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/ef/log.46676269._092725.job.log.tg
[2025-10-13 05:50:34] 2025-10-13 09:49:50,087 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:50:34] 2025-10-13 09:49:50,087 | INFO     | summary of transferred files:
[2025-10-13 05:50:34] 2025-10-13 09:49:50,087 | INFO     |  -- lfn=log.46676269._092725.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:50:34] 2025-10-13 09:49:50,088 | INFO     | stage-out finished correctly
[2025-10-13 05:50:34] 2025-10-13 09:49:51,242 | INFO     | PID=3158693 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 05:50:34] 2025-10-13 09:49:51,243 | INFO     | .. there are 5 such processes running
[2025-10-13 05:50:34] 2025-10-13 09:49:51,478 | INFO     | monitor loop #416: job 0:6840970388 is in state 'finished'
[2025-10-13 05:50:34] 2025-10-13 09:49:51,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:50:34] 2025-10-13 09:49:51,525 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:50:34] 2025-10-13 09:49:52,243 | INFO     | time since job start (5673s) is within the limit (172800.0s)
[2025-10-13 05:50:34] 2025-10-13 09:49:53,981 | INFO     | monitor loop #417: job 0:6840970388 is in state 'finished'
[2025-10-13 05:50:34] 2025-10-13 09:49:53,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:50:34] 2025-10-13 09:49:54,249 | INFO     | time since job start (5675s) is within the limit (172800.0s)
[2025-10-13 05:50:34] 2025-10-13 09:49:54,545 | INFO     | job 6840970388 has state=finished
[2025-10-13 05:50:34] 2025-10-13 09:49:54,546 | INFO     | preparing for final server update for job 6840970388 in state='finished'
[2025-10-13 05:50:34] 2025-10-13 09:49:54,546 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:50:34] 2025-10-13 09:49:54,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:50:34] 2025-10-13 09:49:54,547 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:50:34] 2025-10-13 09:49:54,547 | INFO     | job 6840970388 has finished - writing final server update
[2025-10-13 05:50:34] 2025-10-13 09:49:54,547 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:50:34] 2025-10-13 09:49:54,548 | INFO     | executing command: lscpu
[2025-10-13 05:50:34] 2025-10-13 09:49:54,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:50:34] 2025-10-13 09:49:56,254 | INFO     | time since job start (5677s) is within the limit (172800.0s)
[2025-10-13 05:50:34] 2025-10-13 09:49:56,485 | INFO     | monitor loop #418: job 0:6840970388 is in state 'finished'
[2025-10-13 05:50:34] 2025-10-13 09:49:56,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,140 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:50:34] 2025-10-13 09:49:58,159 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2740.1366000000003
[2025-10-13 05:50:34] 2025-10-13 09:49:58,165 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840970388/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,166 | INFO     | extracted standard info from prmon json
[2025-10-13 05:50:34] 2025-10-13 09:49:58,166 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:50:34] 2025-10-13 09:49:58,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:50:34] 2025-10-13 09:49:58,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:50:34] 2025-10-13 09:49:58,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:50:34] 2025-10-13 09:49:58,169 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:50:34] 2025-10-13 09:49:58,170 | INFO     | sum of square deviations: 197203697.5
[2025-10-13 05:50:34] 2025-10-13 09:49:58,170 | INFO     | sum of deviations: -12412605679.0
[2025-10-13 05:50:34] 2025-10-13 09:49:58,170 | INFO     | mean x: 1760346241.5
[2025-10-13 05:50:34] 2025-10-13 09:49:58,170 | INFO     | mean y: 2323029.023255814
[2025-10-13 05:50:34] 2025-10-13 09:49:58,170 | INFO     | -- intersect: 110803915652.5551
[2025-10-13 05:50:34] 2025-10-13 09:49:58,171 | INFO     | intersect: 110803915652.5551
[2025-10-13 05:50:34] 2025-10-13 09:49:58,171 | INFO     | chi2: 0.10037042546745549
[2025-10-13 05:50:34] 2025-10-13 09:49:58,171 | INFO     | -- intersect: 110803915652.5551
[2025-10-13 05:50:34] 2025-10-13 09:49:58,171 | INFO     | current memory leak: -62.94 B/s (using 86 data points, chi2=0.10)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,171 | INFO     | could have reported an average CPU frequency of 2683 MHz (7 samples)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | ..............................
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | . Timing measurements:
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | . get job = 0 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | . initial setup = 2 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | . payload setup = 5 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,172 | INFO     | . stage-in = 0 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,173 | INFO     | . payload execution = 5645 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,173 | INFO     | . stage-out = 0 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,173 | INFO     | . log creation = 0 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,173 | INFO     | ..............................
[2025-10-13 05:50:34] 2025-10-13 09:49:58,261 | INFO     | time since job start (5679s) is within the limit (172800.0s)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,694 | INFO     | 
[2025-10-13 05:50:34] 2025-10-13 09:49:58,694 | INFO     | job summary report
[2025-10-13 05:50:34] 2025-10-13 09:49:58,694 | INFO     | --------------------------------------------------
[2025-10-13 05:50:34] 2025-10-13 09:49:58,694 | INFO     | PanDA job id: 6840970388
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | task id: 46676269
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | errors: (none)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | pilot state: finished 
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | transexitcode: 0
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | exeerrorcode: 0
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | exeerrordiag: 
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | exitcode: 0
[2025-10-13 05:50:34] 2025-10-13 09:49:58,695 | INFO     | exitmsg: OK
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | cpuconsumptiontime: 41238 s
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | nevents: 400
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | neventsw: 0
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | pid: 3165336
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | pgrp: 3165336
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | corecount: 8
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | event service: False
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 5655: 2375905, 5656: 2384903, 5657: 2385087, 5664: 2385281}
[2025-10-13 05:50:34] 2025-10-13 09:49:58,696 | INFO     | --------------------------------------------------
[2025-10-13 05:50:34] 2025-10-13 09:49:58,697 | INFO     | 
[2025-10-13 05:50:34] 2025-10-13 09:49:58,697 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 05:50:34] 2025-10-13 09:49:58,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:50:34] 2025-10-13 09:49:58,716 | INFO     | job 6840970388 has completed (purged errors)
[2025-10-13 05:50:34] 2025-10-13 09:49:58,716 | INFO     | overall cleanup function is called
[2025-10-13 05:50:34] 2025-10-13 09:49:59,724 | INFO     | --- collectZombieJob: --- 10, [3165336]
[2025-10-13 05:50:34] 2025-10-13 09:49:59,724 | INFO     | zombie collector waiting for pid 3165336
[2025-10-13 05:50:34] 2025-10-13 09:49:59,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:50:34] 2025-10-13 09:49:59,725 | INFO     | collected zombie processes
[2025-10-13 05:50:34] 2025-10-13 09:49:59,725 | INFO     | will attempt to kill all subprocesses of pid=3165336
[2025-10-13 05:50:34] 2025-10-13 09:49:59,982 | INFO     | process IDs to be killed: [3165336] (in reverse order)
[2025-10-13 05:50:34] 2025-10-13 09:50:00,051 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:50:34] 2025-10-13 09:50:00,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:50:34] 2025-10-13 09:50:00,060 | INFO     | did not find any defunct processes belonging to 3165336
[2025-10-13 05:50:34] 2025-10-13 09:50:00,067 | INFO     | did not find any defunct processes belonging to 3165336
[2025-10-13 05:50:34] 2025-10-13 09:50:00,067 | INFO     | ready for new job
[2025-10-13 05:50:34] 2025-10-13 09:50:00,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:50:34] 2025-10-13 09:50:00,069 | INFO     | ***************************************
[2025-10-13 05:50:34] 2025-10-13 09:50:00,069 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:50:34] 2025-10-13 09:50:00,069 | INFO     | ***************************************
[2025-10-13 05:50:34] 2025-10-13 09:50:00,069 | INFO     | 
[2025-10-13 05:50:34] 2025-10-13 09:50:00,082 | INFO     | architecture information:
[2025-10-13 05:50:34] 2025-10-13 09:50:00,083 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:50:34] 2025-10-13 09:50:00,096 | INFO     | cat /etc/os-release:
[2025-10-13 05:50:34] NAME="CentOS Linux"
[2025-10-13 05:50:34] VERSION="7 (Core)"
[2025-10-13 05:50:34] ID="centos"
[2025-10-13 05:50:34] ID_LIKE="rhel fedora"
[2025-10-13 05:50:34] VERSION_ID="7"
[2025-10-13 05:50:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:50:34] ANSI_COLOR="0;31"
[2025-10-13 05:50:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:50:34] HOME_URL="https://www.centos.org/"
[2025-10-13 05:50:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:50:34] 
[2025-10-13 05:50:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:50:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:50:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:50:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:50:34] 
[2025-10-13 05:50:34] 2025-10-13 09:50:00,096 | INFO     | ***************************************
[2025-10-13 05:50:34] 2025-10-13 09:50:00,599 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 05:50:34] 2025-10-13 09:50:00,613 | INFO     | sufficient remaining disk space (74518102016 B)
[2025-10-13 05:50:34] 2025-10-13 09:50:00,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:50:34] 2025-10-13 09:50:00,613 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:50:34] 2025-10-13 09:50:00,614 | INFO     | update_server=False
[2025-10-13 05:50:34] 2025-10-13 09:50:00,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:50:34] 2025-10-13 09:50:00,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:34] 2025-10-13 09:50:00,614 | INFO     | aborting loop
[2025-10-13 05:50:34] 2025-10-13 09:50:00,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:50:34] 2025-10-13 09:50:00,891 | INFO     | all payload control threads have been joined
[2025-10-13 05:50:34] 2025-10-13 09:50:01,004 | INFO     | all job control threads have been joined
[2025-10-13 05:50:34] 2025-10-13 09:50:01,297 | INFO     | all data control threads have been joined
[2025-10-13 05:50:34] 2025-10-13 09:50:01,619 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,620 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,780 | INFO     | [job] validate thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,830 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,875 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,884 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:01,896 | INFO     | [payload] control thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,010 | INFO     | [job] control thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:50:34] 2025-10-13 09:50:02,302 | INFO     | [data] control thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,472 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,716 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:02,737 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:03,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:34] 2025-10-13 09:50:04,296 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:06,143 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:50:34] 2025-10-13 09:50:27,848 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:50:34] 2025-10-13 09:50:29,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666396514112)>', '<ExcThread(monitor, started 140666042558208)>']
[2025-10-13 05:50:34] 2025-10-13 09:50:31,653 | INFO     | PID=3158693 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:50:34] 2025-10-13 09:50:31,654 | INFO     | .. there are 5 such processes running
[2025-10-13 05:50:34] 2025-10-13 09:50:31,654 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:50:34] 2025-10-13 09:50:31,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:50:34] 2025-10-13 09:50:31,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:50:34] 2025-10-13 09:50:31,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:50:34] 2025-10-13 09:50:31,655 | INFO     | [monitor] control thread has ended
[2025-10-13 05:50:34] 2025-10-13 09:50:34,008 | INFO     | all workflow threads have been joined
[2025-10-13 05:50:34] 2025-10-13 09:50:34,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:50:34] 2025-10-13 09:50:34,008 | INFO     | traces error code: 0
[2025-10-13 05:50:34] 2025-10-13 09:50:34,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:50:34] 2025-10-13 09:50:34,114 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:50:34] 2025-10-13 09:50:34,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:50:34] 2025-10-13 09:50:34,120 [wrapper] pilotpid: 3158693
[2025-10-13 05:50:34] 2025-10-13 09:50:34,122 [wrapper] Pilot exit status: 0
[2025-10-13 05:50:34] 2025-10-13 09:50:34,131 [wrapper] pandaids: 6840970388
[2025-10-13 05:50:34] 2025-10-13 09:50:34,178 [wrapper] cleanup supervisor_pilot 3388514 3158694
[2025-10-13 05:50:34] 2025-10-13 09:50:34,181 [wrapper] Test setup, not cleaning
[2025-10-13 05:50:34] 2025-10-13 09:50:34,183 [wrapper] apfmon messages muted
[2025-10-13 05:50:34] 2025-10-13 09:50:34,185 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:50:34] 2025-10-13 09:50:34,188 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:50:34]  *** Error codes and diagnostics ***
[2025-10-13 05:50:34]     "exeErrorCode": 0,
[2025-10-13 05:50:34]     "exeErrorDiag": "",
[2025-10-13 05:50:34]     "pilotErrorCode": 0,
[2025-10-13 05:50:34]     "pilotErrorDiag": "",
[2025-10-13 05:50:34]  *** Listing of results directory ***
[2025-10-13 05:50:34] total 406288
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:57 queuedata.json
[2025-10-13 05:50:34] -rwx------. 1 boincer umatlas     36292 Oct 12 19:59 runpilot2-wrapper.sh
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:50:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:15 run_atlas
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:15 job.xml
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas 219007497 Oct 13 04:15 EVNT.46676267._004678.pool.root.1
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:15 start_atlas.sh
[2025-10-13 05:50:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:15 shared
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 04:15 input.tar.gz
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:15 boinc_lockfile
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:15 pandaJob.out
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas    972857 Oct 13 04:15 agis_schedconf.cvmfs.json
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:50:34] drwx------. 5 boincer umatlas      4096 Oct 13 04:15 pilot3
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas 190800095 Oct 13 05:49 HITS.46676269._092725.pool.root.1
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:49 boinc_task_state.xml
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 05:49 init_data.xml
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas      1032 Oct 13 05:49 memory_monitor_summary.json
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas    338202 Oct 13 05:49 log.46676269._092725.job.log.tgz.1
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas      7809 Oct 13 05:49 heartbeat.json
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:50 boinc_mmap_file
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:50 wrapper_checkpoint.txt
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas        95 Oct 13 05:50 pilot_heartbeat.json
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas      4823 Oct 13 05:50 pilotlog.txt
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas    825675 Oct 13 05:50 log.46676269._092725.job.log.1
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas       357 Oct 13 05:50 output.list
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:50 runtime_log
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas   1187840 Oct 13 05:50 result.tar.gz
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 05:50 runtime_log.err
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas       650 Oct 13 05:50 JPYNDm78KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD8lNDmL5MhGn.diag
[2025-10-13 05:50:34] -rw-r--r--. 1 boincer umatlas     22097 Oct 13 05:50 stderr.txt
[2025-10-13 05:50:34] HITS file was successfully produced:
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas 190800095 Oct 13 05:49 shared/HITS.pool.root.1
[2025-10-13 05:50:34]  *** Contents of shared directory: ***
[2025-10-13 05:50:34] total 401948
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas 219007497 Oct 13 04:15 ATLAS.root_0
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:15 start_atlas.sh
[2025-10-13 05:50:34] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 04:15 input.tar.gz
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas 190800095 Oct 13 05:49 HITS.pool.root.1
[2025-10-13 05:50:34] -rw-------. 1 boincer umatlas   1187840 Oct 13 05:50 result.tar.gz
05:50:35 (3155029): run_atlas exited; CPU time 41377.483986
05:50:35 (3155029): called boinc_finish(0)

</stderr_txt>
]]>

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